Literature DB >> 22065547

2,2-Diethyl 4-methyl 5-(4-nitro-phen-yl)-4-phenyl-pyrrolidine-2,2,4-tricarboxyl-ate.

Long He1.   

Abstract

The title compound, C(24)H(26)N(2)O(8), was synthesized by the cyclo-addition reaction of methyl 2-phenyl-acrylate, diethyl 2-amino-malonate and 4-nitro-benzaldehyde. The pyrrolidine ring exhibits an envelope conformation. The two benzene rings are located on opposite sides of the pyrrolidine ring and subtend a dihedral angle of 59.16 (14)°. The crystal packing is stabilized by N-H⋯O and weak C-H⋯O hydrogen bonding.

Entities:  

Year:  2011        PMID: 22065547      PMCID: PMC3201539          DOI: 10.1107/S1600536811036038

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of pyrrolidine derivatives, see: Coldham & Hufton (2005 ▶); Nair & Suja (2007 ▶); Pandey et al. (2006 ▶); Sardina & Rapoport (1996 ▶). For a related structure, see: Yu et al. (2007 ▶).

Experimental

Crystal data

C24H26N2O8 M = 470.47 Orthorhombic, a = 9.7948 (1) Å b = 10.9356 (2) Å c = 22.3240 (3) Å V = 2391.17 (6) Å3 Z = 4 Cu Kα radiation μ = 0.83 mm−1 T = 120 K 0.44 × 0.40 × 0.36 mm

Data collection

Gemini S Ultra, Oxford Diffraction diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.712, T max = 0.755 21308 measured reflections 4686 independent reflections 4613 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.068 S = 1.02 4686 reflections 314 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.19 e Å−3 Absolute structure: Flack (1983 ▶), 1995 Friedel pairs Flack parameter: 0.05 (10) Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811036038/xu5319sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036038/xu5319Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811036038/xu5319Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H26N2O8Dx = 1.307 Mg m3
Mr = 470.47Cu Kα radiation, λ = 1.54184 Å
Orthorhombic, P212121Cell parameters from 18450 reflections
a = 9.7948 (1) Åθ = 2.0–72.2°
b = 10.9356 (2) ŵ = 0.83 mm1
c = 22.3240 (3) ÅT = 120 K
V = 2391.17 (6) Å3Block, colorless
Z = 40.44 × 0.40 × 0.36 mm
F(000) = 992
Gemini S Ultra, Oxford Diffraction diffractometer4686 independent reflections
Radiation source: Enhance Ultra (Cu) X-ray Source4613 reflections with I > 2σ(I)
mirrorRint = 0.018
Detector resolution: 15.9149 pixels mm-1θmax = 72.3°, θmin = 4.5°
ω scansh = −9→12
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −13→13
Tmin = 0.712, Tmax = 0.755l = −25→27
21308 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.025H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.068w = 1/[σ2(Fo2) + (0.0432P)2 + 0.3419P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max = 0.001
4686 reflectionsΔρmax = 0.18 e Å3
314 parametersΔρmin = −0.19 e Å3
1 restraintAbsolute structure: Flack (1983), 1995 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.05 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O50.85432 (8)0.19604 (7)0.82698 (3)0.02452 (17)
O80.54703 (9)0.22728 (8)0.84562 (4)0.02882 (18)
O60.78904 (8)0.37692 (7)0.78836 (4)0.02724 (18)
O40.84169 (9)0.10400 (8)0.56346 (4)0.03091 (19)
O30.78250 (9)−0.05809 (7)0.61949 (4)0.03171 (19)
O70.48509 (10)0.06449 (9)0.79096 (4)0.0385 (2)
N20.60890 (10)0.26899 (9)0.70963 (4)0.02279 (19)
O20.24732 (10)0.03877 (8)0.44941 (4)0.0337 (2)
O10.17733 (13)−0.06248 (12)0.52573 (5)0.0574 (3)
C90.73152 (11)0.08472 (10)0.72218 (5)0.0220 (2)
H9A0.66210.02390.71370.026*
H9B0.80530.04670.74440.026*
N10.25329 (10)0.01249 (9)0.50266 (4)0.0269 (2)
C70.66436 (11)0.23550 (10)0.65042 (5)0.0215 (2)
H70.70060.30860.63060.026*
C10.35612 (11)0.07188 (10)0.54019 (5)0.0231 (2)
C60.45396 (13)0.14517 (11)0.51335 (5)0.0273 (2)
H60.45330.15890.47220.033*
C190.77782 (11)0.26768 (10)0.79176 (5)0.0221 (2)
C130.92478 (11)0.20396 (10)0.67511 (5)0.0215 (2)
C230.43853 (15)0.20090 (13)0.88861 (6)0.0373 (3)
H23B0.44010.11510.89970.045*
H23A0.35010.21940.87130.045*
C100.67169 (11)0.19350 (10)0.75643 (5)0.0217 (2)
C80.78413 (11)0.14446 (9)0.66437 (5)0.0212 (2)
C181.02741 (12)0.13124 (10)0.70024 (5)0.0263 (2)
H181.00870.05000.70940.032*
C20.35244 (12)0.05137 (11)0.60140 (5)0.0252 (2)
H20.28520.00220.61830.030*
C240.46374 (15)0.27937 (13)0.94241 (6)0.0378 (3)
H24A0.46160.36390.93090.057*
H24C0.55160.26030.95900.057*
H24B0.39430.26430.97180.057*
C200.96208 (13)0.25973 (11)0.85989 (6)0.0296 (3)
H20B0.92250.31790.88770.036*
H20A1.02080.30370.83230.036*
C30.45103 (12)0.10576 (11)0.63675 (5)0.0243 (2)
H30.44920.09390.67800.029*
C40.55327 (11)0.17816 (10)0.61151 (5)0.0223 (2)
C140.95634 (12)0.32441 (10)0.66059 (5)0.0254 (2)
H140.89010.37440.64360.030*
C171.15604 (12)0.17777 (11)0.71167 (6)0.0288 (2)
H171.22220.12840.72920.035*
C161.18663 (12)0.29794 (11)0.69709 (6)0.0303 (3)
H161.27320.32940.70450.036*
C110.80173 (11)0.05013 (10)0.61454 (5)0.0240 (2)
C151.08674 (13)0.37060 (11)0.67138 (6)0.0302 (3)
H151.10680.45110.66120.036*
C220.55725 (12)0.15160 (10)0.79941 (5)0.0248 (2)
C50.55285 (12)0.19731 (11)0.54968 (5)0.0271 (2)
H50.62020.24600.53250.033*
C120.84991 (17)0.02457 (14)0.51173 (6)0.0415 (3)
H12B0.87720.07130.47740.062*
H12A0.7622−0.01160.50440.062*
H12C0.9158−0.03870.51910.062*
C211.04251 (14)0.16528 (12)0.89319 (6)0.0354 (3)
H21A1.08600.11130.86510.053*
H21B0.98240.11910.91850.053*
H21C1.11070.20480.91730.053*
H10.6194 (16)0.3476 (12)0.7157 (7)0.036 (4)*
U11U22U33U12U13U23
O50.0248 (4)0.0227 (4)0.0261 (4)−0.0011 (3)−0.0056 (3)−0.0024 (3)
O80.0301 (4)0.0284 (4)0.0279 (4)−0.0067 (3)0.0083 (3)−0.0035 (3)
O60.0313 (4)0.0217 (4)0.0287 (4)−0.0023 (3)−0.0017 (3)−0.0022 (3)
O40.0376 (4)0.0301 (4)0.0250 (4)−0.0048 (4)0.0040 (3)−0.0057 (3)
O30.0395 (5)0.0214 (4)0.0342 (4)−0.0001 (3)−0.0028 (4)−0.0042 (3)
O70.0411 (5)0.0389 (5)0.0354 (5)−0.0188 (4)0.0072 (4)−0.0086 (4)
N20.0255 (5)0.0190 (4)0.0238 (5)0.0015 (4)−0.0022 (4)−0.0018 (4)
O20.0407 (5)0.0350 (4)0.0254 (4)−0.0050 (4)−0.0103 (4)0.0014 (3)
O10.0617 (7)0.0747 (8)0.0358 (5)−0.0457 (6)−0.0091 (5)0.0069 (5)
C90.0243 (5)0.0181 (5)0.0236 (5)−0.0012 (4)−0.0021 (4)0.0000 (4)
N10.0276 (5)0.0263 (5)0.0269 (5)−0.0025 (4)−0.0035 (4)−0.0019 (4)
C70.0221 (5)0.0196 (5)0.0227 (5)−0.0004 (4)−0.0016 (4)0.0014 (4)
C10.0234 (5)0.0212 (5)0.0246 (5)0.0003 (4)−0.0044 (4)−0.0022 (4)
C60.0311 (6)0.0268 (6)0.0240 (5)−0.0031 (5)−0.0043 (4)0.0040 (4)
C190.0216 (5)0.0235 (5)0.0212 (5)−0.0008 (4)0.0017 (4)−0.0019 (4)
C130.0227 (5)0.0218 (5)0.0200 (5)−0.0005 (4)0.0004 (4)−0.0036 (4)
C230.0384 (7)0.0380 (7)0.0356 (7)−0.0109 (6)0.0165 (6)−0.0030 (6)
C100.0225 (5)0.0203 (5)0.0224 (5)−0.0013 (4)−0.0007 (4)0.0004 (4)
C80.0230 (5)0.0178 (5)0.0229 (5)−0.0004 (4)−0.0016 (4)−0.0003 (4)
C180.0254 (5)0.0221 (5)0.0315 (6)0.0022 (4)0.0013 (5)−0.0016 (5)
C20.0236 (5)0.0263 (5)0.0256 (5)−0.0035 (4)0.0014 (4)0.0005 (4)
C240.0470 (8)0.0350 (7)0.0315 (6)−0.0039 (6)0.0122 (6)−0.0009 (5)
C200.0278 (6)0.0284 (6)0.0326 (6)−0.0018 (5)−0.0076 (5)−0.0083 (5)
C30.0255 (5)0.0266 (5)0.0209 (5)−0.0004 (5)0.0009 (4)−0.0003 (4)
C40.0223 (5)0.0194 (5)0.0252 (5)0.0010 (4)−0.0026 (4)0.0000 (4)
C140.0257 (5)0.0236 (5)0.0269 (5)−0.0006 (4)−0.0038 (4)0.0003 (4)
C170.0230 (5)0.0302 (6)0.0332 (6)0.0059 (5)−0.0023 (5)−0.0040 (5)
C160.0224 (5)0.0311 (6)0.0373 (6)−0.0015 (5)−0.0019 (5)−0.0079 (5)
C110.0214 (5)0.0243 (5)0.0262 (5)0.0002 (4)−0.0034 (4)−0.0029 (5)
C150.0306 (6)0.0235 (5)0.0366 (7)−0.0052 (5)−0.0019 (5)−0.0002 (5)
C220.0255 (5)0.0240 (5)0.0247 (5)−0.0023 (4)−0.0009 (4)0.0003 (4)
C50.0288 (5)0.0264 (6)0.0263 (5)−0.0056 (5)−0.0026 (5)0.0051 (5)
C120.0518 (8)0.0441 (8)0.0286 (6)−0.0079 (6)0.0080 (6)−0.0128 (6)
C210.0335 (6)0.0354 (6)0.0374 (7)−0.0006 (5)−0.0115 (5)−0.0020 (5)
O5—C191.3392 (14)C23—H23B0.9700
O5—C201.4626 (13)C23—H23A0.9700
O8—C221.3263 (14)C10—C221.5450 (15)
O8—C231.4608 (14)C8—C111.5269 (15)
O6—C191.2021 (14)C18—C171.3825 (17)
O4—C111.3417 (14)C18—H180.9300
O4—C121.4473 (15)C2—C31.3816 (16)
O3—C111.2034 (14)C2—H20.9300
O7—C221.2010 (14)C24—H24A0.9600
N2—C101.4666 (14)C24—H24C0.9600
N2—C71.4754 (14)C24—H24B0.9600
N2—H10.877 (13)C20—C211.4967 (17)
O2—N11.2244 (13)C20—H20B0.9700
O1—N11.2211 (15)C20—H20A0.9700
C9—C101.5307 (15)C3—C41.3954 (16)
C9—C81.5356 (15)C3—H30.9300
C9—H9A0.9700C4—C51.3961 (16)
C9—H9B0.9700C14—C151.3945 (17)
N1—C11.4622 (14)C14—H140.9300
C7—C41.5270 (14)C17—C161.3866 (18)
C7—C81.5698 (14)C17—H170.9300
C7—H70.9800C16—C151.3849 (18)
C1—C21.3852 (16)C16—H160.9300
C1—C61.3856 (16)C15—H150.9300
C6—C51.3861 (16)C5—H50.9300
C6—H60.9300C12—H12B0.9600
C19—C101.5365 (15)C12—H12A0.9600
C13—C141.3912 (16)C12—H12C0.9600
C13—C181.3991 (16)C21—H21A0.9600
C13—C81.5424 (15)C21—H21B0.9600
C23—C241.4966 (18)C21—H21C0.9600
C19—O5—C20114.85 (9)C3—C2—C1118.39 (10)
C22—O8—C23116.28 (9)C3—C2—H2120.8
C11—O4—C12115.52 (10)C1—C2—H2120.8
C10—N2—C7110.13 (8)C23—C24—H24A109.5
C10—N2—H1113.2 (10)C23—C24—H24C109.5
C7—N2—H1109.8 (10)H24A—C24—H24C109.5
C10—C9—C8102.57 (8)C23—C24—H24B109.5
C10—C9—H9A111.3H24A—C24—H24B109.5
C8—C9—H9A111.3H24C—C24—H24B109.5
C10—C9—H9B111.3O5—C20—C21107.50 (10)
C8—C9—H9B111.3O5—C20—H20B110.2
H9A—C9—H9B109.2C21—C20—H20B110.2
O1—N1—O2122.54 (10)O5—C20—H20A110.2
O1—N1—C1118.44 (10)C21—C20—H20A110.2
O2—N1—C1119.01 (10)H20B—C20—H20A108.5
N2—C7—C4110.44 (9)C2—C3—C4121.01 (10)
N2—C7—C8104.76 (8)C2—C3—H3119.5
C4—C7—C8112.64 (9)C4—C3—H3119.5
N2—C7—H7109.6C3—C4—C5118.83 (10)
C4—C7—H7109.6C3—C4—C7120.98 (10)
C8—C7—H7109.6C5—C4—C7120.19 (10)
C2—C1—C6122.57 (10)C13—C14—C15120.41 (11)
C2—C1—N1118.39 (10)C13—C14—H14119.8
C6—C1—N1119.05 (10)C15—C14—H14119.8
C1—C6—C5117.92 (10)C18—C17—C16120.16 (11)
C1—C6—H6121.0C18—C17—H17119.9
C5—C6—H6121.0C16—C17—H17119.9
O6—C19—O5124.56 (10)C15—C16—C17119.23 (11)
O6—C19—C10123.65 (10)C15—C16—H16120.4
O5—C19—C10111.79 (9)C17—C16—H16120.4
C14—C13—C18118.16 (10)O3—C11—O4123.75 (10)
C14—C13—C8124.17 (10)O3—C11—C8125.43 (10)
C18—C13—C8117.67 (10)O4—C11—C8110.82 (9)
O8—C23—C24107.10 (10)C16—C15—C14120.72 (11)
O8—C23—H23B110.3C16—C15—H15119.6
C24—C23—H23B110.3C14—C15—H15119.6
O8—C23—H23A110.3O7—C22—O8124.94 (11)
C24—C23—H23A110.3O7—C22—C10124.38 (10)
H23B—C23—H23A108.5O8—C22—C10110.65 (9)
N2—C10—C9104.02 (8)C6—C5—C4121.25 (11)
N2—C10—C19110.62 (9)C6—C5—H5119.4
C9—C10—C19114.06 (9)C4—C5—H5119.4
N2—C10—C22107.76 (9)O4—C12—H12B109.5
C9—C10—C22110.94 (9)O4—C12—H12A109.5
C19—C10—C22109.18 (9)H12B—C12—H12A109.5
C11—C8—C9111.27 (9)O4—C12—H12C109.5
C11—C8—C13107.31 (8)H12B—C12—H12C109.5
C9—C8—C13110.39 (9)H12A—C12—H12C109.5
C11—C8—C7111.61 (9)C20—C21—H21A109.5
C9—C8—C7100.70 (8)C20—C21—H21B109.5
C13—C8—C7115.52 (9)H21A—C21—H21B109.5
C17—C18—C13121.30 (11)C20—C21—H21C109.5
C17—C18—H18119.3H21A—C21—H21C109.5
C13—C18—H18119.3H21B—C21—H21C109.5
C10—N2—C7—C4113.63 (10)C14—C13—C18—C171.38 (17)
C10—N2—C7—C8−7.91 (11)C8—C13—C18—C17−179.57 (10)
O1—N1—C1—C2−7.48 (17)C6—C1—C2—C3−0.44 (17)
O2—N1—C1—C2173.19 (11)N1—C1—C2—C3178.89 (10)
O1—N1—C1—C6171.88 (12)C19—O5—C20—C21−176.15 (10)
O2—N1—C1—C6−7.46 (16)C1—C2—C3—C4−0.96 (17)
C2—C1—C6—C51.32 (17)C2—C3—C4—C51.43 (17)
N1—C1—C6—C5−178.01 (11)C2—C3—C4—C7−178.38 (10)
C20—O5—C19—O6−3.51 (16)N2—C7—C4—C3−34.13 (14)
C20—O5—C19—C10177.22 (9)C8—C7—C4—C382.62 (13)
C22—O8—C23—C24168.33 (11)N2—C7—C4—C5146.06 (10)
C7—N2—C10—C9−18.33 (11)C8—C7—C4—C5−97.19 (12)
C7—N2—C10—C19104.55 (10)C18—C13—C14—C15−0.44 (16)
C7—N2—C10—C22−136.16 (9)C8—C13—C14—C15−179.43 (10)
C8—C9—C10—N237.62 (10)C13—C18—C17—C16−1.38 (18)
C8—C9—C10—C19−82.98 (10)C18—C17—C16—C150.42 (18)
C8—C9—C10—C22153.23 (9)C12—O4—C11—O35.05 (17)
O6—C19—C10—N212.31 (15)C12—O4—C11—C8−174.76 (10)
O5—C19—C10—N2−168.42 (9)C9—C8—C11—O3−2.64 (16)
O6—C19—C10—C9129.15 (11)C13—C8—C11—O3118.22 (12)
O5—C19—C10—C9−51.58 (12)C7—C8—C11—O3−114.27 (12)
O6—C19—C10—C22−106.11 (12)C9—C8—C11—O4177.16 (9)
O5—C19—C10—C2273.16 (11)C13—C8—C11—O4−61.97 (11)
C10—C9—C8—C11−159.73 (9)C7—C8—C11—O465.53 (12)
C10—C9—C8—C1381.23 (10)C17—C16—C15—C140.51 (19)
C10—C9—C8—C7−41.32 (10)C13—C14—C15—C16−0.49 (18)
C14—C13—C8—C11110.59 (11)C23—O8—C22—O7−0.31 (18)
C18—C13—C8—C11−68.40 (12)C23—O8—C22—C10177.58 (10)
C14—C13—C8—C9−128.00 (11)N2—C10—C22—O783.83 (14)
C18—C13—C8—C953.01 (12)C9—C10—C22—O7−29.43 (16)
C14—C13—C8—C7−14.60 (15)C19—C10—C22—O7−155.97 (11)
C18—C13—C8—C7166.41 (10)N2—C10—C22—O8−94.08 (11)
N2—C7—C8—C11148.71 (9)C9—C10—C22—O8152.66 (9)
C4—C7—C8—C1128.62 (12)C19—C10—C22—O826.12 (12)
N2—C7—C8—C930.54 (10)C1—C6—C5—C4−0.82 (18)
C4—C7—C8—C9−89.54 (10)C3—C4—C5—C6−0.51 (17)
N2—C7—C8—C13−88.36 (10)C7—C4—C5—C6179.30 (10)
C4—C7—C8—C13151.56 (9)
D—H···AD—HH···AD···AD—H···A
N2—H1···O7i0.88 (1)2.59 (1)3.360 (4)148.(1)
C12—H12C···O1ii0.962.583.360 (2)139.(1)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1⋯O7i0.88 (1)2.59 (1)3.360 (4)148 (1)
C12—H12C⋯O1ii0.962.583.360 (2)139 (1)

Symmetry codes: (i) ; (ii) .

  4 in total

1.  Enantiospecific Synthesis of Heterocycles from alpha-Amino Acids.

Authors:  F. Javier Sardina; Henry Rapoport
Journal:  Chem Rev       Date:  1996-10-01       Impact factor: 60.622

2.  Intramolecular dipolar cycloaddition reactions of azomethine ylides.

Authors:  Iain Coldham; Richard Hufton
Journal:  Chem Rev       Date:  2005-07       Impact factor: 60.622

3.  Construction of enantiopure pyrrolidine ring system via asymmetric [3+2]-cycloaddition of azomethine ylides.

Authors:  Ganesh Pandey; Prabal Banerjee; Smita R Gadre
Journal:  Chem Rev       Date:  2006-11       Impact factor: 60.622

4.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  4 in total

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