| Literature DB >> 22065512 |
Dean H Johnston1, Colin R Taylor.
Abstract
The title compound, C(13)H(9)N(3)O(5), prepared as a solid derivative of 3-nitro-analine via reaction with 4-nitro-benzoyl chloride, crystallizes in a chiral space group. The mol-ecule is non-planar with a dihedral angle of 26.1 (1)° between the two benzene rings. Both nitro groups are twisted slightly out of the plane of their corresponding benzene rings, making dihedral angles of 10.7 (4) and 13.5 (4)°. The mol-ecules are stacked along the a axis with benzene ring centroid-centroid distances of 3.8878 (6) Å. In the crystal, inter-molecular benzene C-H⋯O inter-actions involving one nitro group and the carbonyl group link the mol-ecules, forming chains along [001]. An additional set of aromatic C-H⋯O inter-actions with the second nitro group form chains along [101], connecting adjacent chains to create layers perpendicular to the b axis.Entities:
Year: 2011 PMID: 22065512 PMCID: PMC3201324 DOI: 10.1107/S1600536811038062
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H9N3O5 | |
| Melting point: 502 K | |
| Monoclinic, | Mo |
| Cell parameters from 1373 reflections | |
| θ = 2.8–24.6° | |
| µ = 0.12 mm−1 | |
| β = 90.294 (11)° | |
| Block, clear colourless | |
| 0.45 × 0.20 × 0.12 mm | |
| Bruker SMART X2S benchtop diffractometer | 1136 independent reflections |
| Radiation source: fine-focus sealed tube | 1008 reflections with |
| doubly curved silicon crystal | |
| Detector resolution: 8.3330 pixels mm-1 | θmax = 25.1°, θmin = 2.8° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 3940 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H-atom parameters constrained | |
| 1136 reflections | (Δ/σ)max < 0.001 |
| 190 parameters | Δρmax = 0.13 e Å−3 |
| 1 restraint | Δρmin = −0.17 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.5757 (8) | 0.50143 (14) | 0.7761 (4) | 0.0293 (7) | |
| C2 | 0.4065 (8) | 0.55485 (16) | 0.8360 (4) | 0.0342 (8) | |
| H2 | 0.3754 | 0.5616 | 0.9618 | 0.041* | |
| C3 | 0.2833 (8) | 0.59829 (15) | 0.7109 (4) | 0.0335 (7) | |
| H3 | 0.1647 | 0.6342 | 0.7499 | 0.040* | |
| C4 | 0.3402 (8) | 0.58731 (15) | 0.5270 (4) | 0.0305 (7) | |
| C5 | 0.5099 (8) | 0.53518 (14) | 0.4631 (4) | 0.0324 (7) | |
| H5 | 0.5439 | 0.5292 | 0.3372 | 0.039* | |
| C6 | 0.6291 (8) | 0.49190 (14) | 0.5889 (4) | 0.0310 (7) | |
| H6 | 0.7462 | 0.4560 | 0.5487 | 0.037* | |
| N1 | 0.2079 (8) | 0.63348 (12) | 0.3938 (4) | 0.0376 (7) | |
| O1 | 0.3012 (8) | 0.62833 (13) | 0.2344 (3) | 0.0634 (9) | |
| O2 | 0.0141 (7) | 0.67441 (11) | 0.4478 (3) | 0.0505 (7) | |
| C7 | 0.7131 (8) | 0.45847 (15) | 0.9221 (4) | 0.0331 (7) | |
| O3 | 0.7597 (8) | 0.47773 (12) | 1.0776 (3) | 0.0533 (7) | |
| N2 | 0.7873 (7) | 0.39887 (12) | 0.8706 (3) | 0.0333 (6) | |
| H2N | 0.7336 | 0.3889 | 0.7585 | 0.040* | |
| C8 | 0.9407 (8) | 0.35147 (14) | 0.9776 (4) | 0.0288 (7) | |
| C9 | 1.0551 (8) | 0.36141 (15) | 1.1561 (4) | 0.0300 (7) | |
| H9 | 1.0295 | 0.4004 | 1.2133 | 0.036* | |
| C10 | 1.2070 (8) | 0.31193 (15) | 1.2457 (4) | 0.0293 (7) | |
| C11 | 1.2552 (8) | 0.25372 (14) | 1.1709 (4) | 0.0317 (7) | |
| H11 | 1.3622 | 0.2214 | 1.2371 | 0.038* | |
| C12 | 1.1382 (9) | 0.24514 (16) | 0.9931 (4) | 0.0352 (8) | |
| H12 | 1.1654 | 0.2061 | 0.9368 | 0.042* | |
| C13 | 0.9830 (8) | 0.29302 (14) | 0.8981 (4) | 0.0318 (7) | |
| H13 | 0.9045 | 0.2862 | 0.7778 | 0.038* | |
| N3 | 1.3347 (7) | 0.32240 (13) | 1.4340 (3) | 0.0344 (6) | |
| O4 | 1.2424 (7) | 0.36973 (11) | 1.5145 (3) | 0.0508 (7) | |
| O5 | 1.5281 (7) | 0.28377 (13) | 1.5016 (3) | 0.0543 (8) |
| C1 | 0.0323 (17) | 0.0299 (17) | 0.0255 (14) | −0.0032 (15) | −0.0023 (13) | 0.0021 (12) |
| C2 | 0.0383 (18) | 0.0392 (19) | 0.0253 (14) | 0.0005 (16) | 0.0027 (13) | −0.0022 (13) |
| C3 | 0.0303 (17) | 0.0330 (18) | 0.0371 (17) | 0.0016 (15) | 0.0012 (13) | −0.0011 (14) |
| C4 | 0.0320 (16) | 0.0287 (17) | 0.0308 (16) | −0.0020 (14) | −0.0026 (12) | 0.0035 (13) |
| C5 | 0.0403 (18) | 0.0312 (18) | 0.0257 (15) | −0.0023 (15) | −0.0015 (13) | −0.0001 (13) |
| C6 | 0.0346 (18) | 0.0283 (17) | 0.0301 (15) | 0.0007 (14) | 0.0000 (13) | −0.0031 (12) |
| N1 | 0.0463 (18) | 0.0298 (15) | 0.0367 (15) | 0.0001 (14) | −0.0049 (13) | 0.0033 (13) |
| O1 | 0.099 (2) | 0.0583 (19) | 0.0333 (14) | 0.0236 (17) | 0.0009 (14) | 0.0090 (13) |
| O2 | 0.0610 (17) | 0.0369 (15) | 0.0537 (15) | 0.0135 (14) | 0.0044 (13) | 0.0066 (12) |
| C7 | 0.0341 (18) | 0.037 (2) | 0.0277 (16) | 0.0001 (15) | 0.0005 (13) | −0.0016 (13) |
| O3 | 0.085 (2) | 0.0503 (15) | 0.0244 (12) | 0.0198 (15) | −0.0099 (12) | −0.0062 (11) |
| N2 | 0.0453 (16) | 0.0324 (15) | 0.0220 (12) | −0.0026 (13) | −0.0077 (11) | 0.0010 (11) |
| C8 | 0.0286 (17) | 0.0346 (18) | 0.0233 (14) | −0.0032 (14) | 0.0019 (12) | 0.0037 (12) |
| C9 | 0.0314 (17) | 0.0344 (18) | 0.0240 (15) | −0.0012 (14) | −0.0021 (12) | 0.0000 (13) |
| C10 | 0.0269 (17) | 0.0427 (18) | 0.0182 (12) | −0.0047 (14) | −0.0033 (12) | 0.0011 (13) |
| C11 | 0.0304 (17) | 0.0335 (19) | 0.0312 (16) | 0.0005 (15) | −0.0003 (13) | 0.0033 (14) |
| C12 | 0.0384 (19) | 0.0336 (18) | 0.0337 (16) | 0.0003 (15) | 0.0013 (14) | −0.0027 (14) |
| C13 | 0.0346 (18) | 0.0376 (18) | 0.0232 (14) | −0.0045 (15) | −0.0032 (13) | −0.0017 (13) |
| N3 | 0.0336 (15) | 0.0445 (18) | 0.0251 (12) | −0.0069 (14) | −0.0066 (11) | 0.0053 (13) |
| O4 | 0.0796 (19) | 0.0431 (15) | 0.0297 (12) | −0.0025 (14) | −0.0110 (12) | −0.0067 (11) |
| O5 | 0.0541 (16) | 0.0731 (19) | 0.0356 (12) | 0.0159 (15) | −0.0163 (11) | 0.0044 (13) |
| C1—C2 | 1.405 (5) | N2—C8 | 1.426 (4) |
| C1—C6 | 1.415 (4) | N2—H2N | 0.8800 |
| C1—C7 | 1.520 (4) | C8—C13 | 1.407 (4) |
| C2—C3 | 1.403 (4) | C8—C9 | 1.407 (4) |
| C2—H2 | 0.9500 | C9—C10 | 1.391 (4) |
| C3—C4 | 1.399 (4) | C9—H9 | 0.9500 |
| C3—H3 | 0.9500 | C10—C11 | 1.391 (4) |
| C4—C5 | 1.393 (4) | C10—N3 | 1.493 (4) |
| C4—N1 | 1.494 (4) | C11—C12 | 1.401 (4) |
| C5—C6 | 1.398 (4) | C11—H11 | 0.9500 |
| C5—H5 | 0.9500 | C12—C13 | 1.390 (4) |
| C6—H6 | 0.9500 | C12—H12 | 0.9500 |
| N1—O2 | 1.232 (4) | C13—H13 | 0.9500 |
| N1—O1 | 1.240 (4) | N3—O5 | 1.230 (3) |
| C7—O3 | 1.235 (4) | N3—O4 | 1.240 (4) |
| C7—N2 | 1.378 (4) | ||
| C2—C1—C6 | 120.0 (3) | C7—N2—C8 | 127.6 (3) |
| C2—C1—C7 | 116.4 (2) | C7—N2—H2N | 116.2 |
| C6—C1—C7 | 123.5 (3) | C8—N2—H2N | 116.2 |
| C3—C2—C1 | 120.3 (3) | C13—C8—C9 | 119.5 (3) |
| C3—C2—H2 | 119.8 | C13—C8—N2 | 117.9 (2) |
| C1—C2—H2 | 119.8 | C9—C8—N2 | 122.6 (3) |
| C4—C3—C2 | 118.1 (3) | C10—C9—C8 | 117.4 (3) |
| C4—C3—H3 | 120.9 | C10—C9—H9 | 121.3 |
| C2—C3—H3 | 120.9 | C8—C9—H9 | 121.3 |
| C5—C4—C3 | 123.0 (3) | C9—C10—C11 | 124.7 (2) |
| C5—C4—N1 | 118.9 (2) | C9—C10—N3 | 117.7 (3) |
| C3—C4—N1 | 118.1 (3) | C11—C10—N3 | 117.6 (3) |
| C4—C5—C6 | 118.4 (3) | C10—C11—C12 | 116.7 (3) |
| C4—C5—H5 | 120.8 | C10—C11—H11 | 121.6 |
| C6—C5—H5 | 120.8 | C12—C11—H11 | 121.6 |
| C5—C6—C1 | 120.2 (3) | C13—C12—C11 | 120.9 (3) |
| C5—C6—H6 | 119.9 | C13—C12—H12 | 119.6 |
| C1—C6—H6 | 119.9 | C11—C12—H12 | 119.6 |
| O2—N1—O1 | 123.7 (3) | C12—C13—C8 | 120.9 (3) |
| O2—N1—C4 | 118.6 (3) | C12—C13—H13 | 119.6 |
| O1—N1—C4 | 117.7 (3) | C8—C13—H13 | 119.6 |
| O3—C7—N2 | 123.0 (3) | O5—N3—O4 | 123.1 (3) |
| O3—C7—C1 | 120.2 (3) | O5—N3—C10 | 118.4 (3) |
| N2—C7—C1 | 116.8 (3) | O4—N3—C10 | 118.5 (3) |
| C6—C1—C2—C3 | 1.4 (4) | O3—C7—N2—C8 | −3.5 (5) |
| C7—C1—C2—C3 | 177.5 (3) | C1—C7—N2—C8 | 175.1 (3) |
| C1—C2—C3—C4 | −1.2 (5) | C7—N2—C8—C13 | 178.0 (3) |
| C2—C3—C4—C5 | 0.6 (5) | C7—N2—C8—C9 | −3.1 (5) |
| C2—C3—C4—N1 | 179.8 (3) | C13—C8—C9—C10 | 0.1 (4) |
| C3—C4—C5—C6 | −0.1 (5) | N2—C8—C9—C10 | −178.7 (3) |
| N1—C4—C5—C6 | −179.3 (3) | C8—C9—C10—C11 | 0.4 (4) |
| C4—C5—C6—C1 | 0.2 (5) | C8—C9—C10—N3 | 178.9 (3) |
| C2—C1—C6—C5 | −0.8 (5) | C9—C10—C11—C12 | −0.5 (4) |
| C7—C1—C6—C5 | −176.7 (3) | N3—C10—C11—C12 | −179.0 (3) |
| C5—C4—N1—O2 | 169.1 (3) | C10—C11—C12—C13 | 0.2 (5) |
| C3—C4—N1—O2 | −10.1 (4) | C11—C12—C13—C8 | 0.3 (5) |
| C5—C4—N1—O1 | −11.0 (4) | C9—C8—C13—C12 | −0.4 (5) |
| C3—C4—N1—O1 | 169.8 (3) | N2—C8—C13—C12 | 178.4 (3) |
| C2—C1—C7—O3 | −19.7 (5) | C9—C10—N3—O5 | −165.8 (3) |
| C6—C1—C7—O3 | 156.3 (3) | C11—C10—N3—O5 | 12.8 (4) |
| C2—C1—C7—N2 | 161.6 (3) | C9—C10—N3—O4 | 13.9 (4) |
| C6—C1—C7—N2 | −22.4 (4) | C11—C10—N3—O4 | −167.5 (3) |
| H··· | ||||
| C2—H2···O1i | 0.95 | 2.50 | 3.375 (4) | 153. |
| C5—H5···O3ii | 0.95 | 2.38 | 3.263 (4) | 155. |
| C13—H13···O5iii | 0.95 | 2.51 | 3.421 (4) | 162. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C2—H2⋯O1i | 0.95 | 2.50 | 3.375 (4) | 153 |
| C5—H5⋯O3ii | 0.95 | 2.38 | 3.263 (4) | 155 |
| C13—H13⋯O5iii | 0.95 | 2.51 | 3.421 (4) | 162 |
Symmetry codes: (i) ; (ii) ; (iii) .