Literature DB >> 22065462

{N'-[1-(2-Pyrid-yl)ethyl-idene-κN]benzo-hydrazidato-κN',O}{N'-[1-(2-pyrid-yl)ethyl-idene-κN]benzohydrazide-κN',O}copper(II) trichloro-acetate.

Amitabha Datta, Nien-Tsu Chuang, Yun-Sheng Wen, Jui-Hsien Huang, Shiann-Cherng Sheu.   

Abstract

In the title complex, [Cu(C(14)H(13)N(3)O)(C(14)H(12)N(3)O)](CCl(3)COO), the central Cu(II) ion exhibits a distorted octa-hedral geometry with the two ligands coordinating in an meridional format. The N(4)O(2) ligand environment is defined by two benzoyl O atoms, two pyridyl N atoms and imino N atoms. As evidenced by the bond lengths, the two benzohydrazone ligands exist in distinctively different forms, one of them as a regular neutral ligand and the other as an anionic enolate arising from deprotonation. The much longer Cu-O bond and longer Cu-N bond lengths in the neutral benzohydrazone ligand imply weak ligation in comparison with the anionic enolate form. The acute angles of the five-membered rings cause a significant deviation from a regular octa-hedral geometry.

Entities:  

Year:  2011        PMID: 22065462      PMCID: PMC3201462          DOI: 10.1107/S1600536811036592

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related complexes of the same precursor ligand, see: Patole et al. (2003 ▶); Sen et al. (2005 ▶, 2007a ▶,b ▶); Ray et al. (2008 ▶); Datta et al. (2010 ▶).

Experimental

Crystal data

[Cu(C14H13N3O)(C14H12N3O)](C2Cl3O2) M = 703.45 Triclinic, a = 8.3341 (6) Å b = 13.0470 (9) Å c = 16.0729 (12) Å α = 107.737 (1)° β = 102.541 (1)° γ = 95.259 (1)° V = 1601.3 (2) Å3 Z = 2 Mo Kα radiation μ = 0.98 mm−1 T = 295 K 0.30 × 0.27 × 0.25 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.799, T max = 0.875 9034 measured reflections 6180 independent reflections 4962 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.189 S = 1.03 6180 reflections 399 parameters 1 restraint H-atom parameters constrained Δρmax = 1.16 e Å−3 Δρmin = −0.52 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811036592/zk2027sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036592/zk2027Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C14H13N3O)(C14H12N3O)](C2Cl3O2)V = 1601.3 (2) Å3
Mr = 703.45Z = 2
Triclinic, P1F(000) = 718
Hall symbol: -P 1Dx = 1.459 Mg m3
a = 8.3341 (6) ÅMo Kα radiation, λ = 0.71073 Å
b = 13.0470 (9) ŵ = 0.98 mm1
c = 16.0729 (12) ÅT = 295 K
α = 107.737 (1)°Square, green
β = 102.541 (1)°0.30 × 0.27 × 0.25 mm
γ = 95.259 (1)°
Bruker APEXII CCD area-detector diffractometer6180 independent reflections
Radiation source: fine-focus sealed tube4962 reflections with I > 2σ(I)
graphiteRint = 0.016
phi and ω scansθmax = 26.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.799, Tmax = 0.875k = −15→16
9034 measured reflectionsl = −17→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.189H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.1266P)2 + 0.7166P] where P = (Fo2 + 2Fc2)/3
6180 reflections(Δ/σ)max = 0.001
399 parametersΔρmax = 1.16 e Å3
1 restraintΔρmin = −0.52 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.8662 (5)0.7231 (4)0.8172 (3)0.0642 (10)
H10.92070.79520.84280.077*
C20.8171 (6)0.6703 (5)0.8729 (3)0.0779 (12)
H20.83650.70690.93460.094*
C30.7401 (6)0.5639 (5)0.8359 (4)0.0810 (14)
H30.70670.52710.87220.097*
C40.7121 (5)0.5114 (4)0.7440 (3)0.0707 (12)
H40.66040.43870.71800.085*
C50.7614 (4)0.5676 (3)0.6908 (3)0.0524 (8)
C60.7387 (4)0.5210 (3)0.5918 (3)0.0521 (8)
C70.6495 (6)0.4074 (3)0.5377 (3)0.0740 (12)
H7A0.60980.40190.47550.111*
H7B0.55680.39070.56060.111*
H7C0.72470.35670.54220.111*
C80.8707 (4)0.6479 (3)0.4554 (2)0.0478 (7)
C90.8752 (4)0.6359 (3)0.3610 (2)0.0501 (8)
C101.0003 (5)0.7006 (3)0.3449 (3)0.0596 (9)
H101.07870.75230.39330.072*
C111.0075 (6)0.6879 (4)0.2581 (3)0.0723 (11)
H111.09340.72920.24790.087*
C120.8891 (7)0.6145 (4)0.1860 (3)0.0810 (13)
H120.89250.60800.12720.097*
C130.7658 (7)0.5509 (4)0.2012 (3)0.0834 (14)
H130.68710.50020.15240.100*
C140.7575 (5)0.5614 (3)0.2868 (3)0.0642 (10)
H140.67230.51830.29600.077*
C151.2778 (5)0.7146 (3)0.7063 (3)0.0568 (9)
H151.24500.64210.66910.068*
C161.4413 (5)0.7497 (4)0.7564 (3)0.0677 (11)
H161.51730.70160.75270.081*
C171.4910 (5)0.8573 (4)0.8123 (3)0.0693 (11)
H171.60000.88260.84780.083*
C181.3744 (5)0.9265 (3)0.8142 (3)0.0622 (10)
H181.40440.99960.85050.075*
C191.2123 (4)0.8857 (3)0.7613 (2)0.0490 (8)
C201.0801 (4)0.9549 (3)0.7556 (3)0.0533 (8)
C211.1254 (6)1.0762 (3)0.8015 (4)0.0950 (19)
H21A1.23751.10020.80110.142*
H21B1.11731.09440.86280.142*
H21C1.05031.11180.77000.142*
C220.6592 (4)0.9005 (3)0.6336 (2)0.0445 (7)
C230.5230 (4)0.9641 (3)0.6162 (2)0.0428 (7)
C240.3589 (4)0.9092 (3)0.5859 (2)0.0496 (8)
H240.33670.83530.57850.060*
C250.2288 (5)0.9639 (3)0.5669 (3)0.0595 (9)
H250.11930.92750.54840.071*
C260.2622 (5)1.0744 (3)0.5757 (3)0.0634 (10)
H260.17511.11130.56220.076*
C270.4247 (5)1.1279 (3)0.6045 (3)0.0624 (10)
H270.44721.20130.61050.075*
C280.5548 (5)1.0737 (3)0.6245 (3)0.0520 (8)
H280.66411.11070.64370.062*
C290.3176 (6)0.7394 (4)0.0606 (3)0.0661 (10)
C300.2374 (6)0.8395 (4)0.1034 (4)0.0753 (12)
N10.8380 (4)0.6743 (3)0.7289 (2)0.0526 (7)
N20.8012 (3)0.5880 (2)0.5580 (2)0.0468 (6)
N30.7924 (4)0.5618 (2)0.4679 (2)0.0521 (7)
N41.1651 (3)0.7807 (2)0.7093 (2)0.0478 (6)
N50.9358 (3)0.9034 (2)0.70525 (19)0.0456 (6)
N60.8058 (3)0.9593 (2)0.6930 (2)0.0500 (7)
H60.81621.02810.72140.060*
O10.9407 (3)0.73837 (19)0.51784 (18)0.0564 (6)
O20.6418 (3)0.80149 (19)0.59581 (19)0.0558 (6)
O30.2322 (5)0.8536 (3)0.1794 (3)0.1018 (12)
O40.1930 (14)0.8931 (8)0.0589 (6)0.261 (5)
Cu0.90049 (5)0.73603 (3)0.63528 (3)0.05047 (18)
Cl10.16329 (19)0.61979 (11)0.01824 (10)0.0956 (4)
Cl20.4774 (2)0.71845 (14)0.14101 (15)0.1265 (7)
Cl30.3983 (5)0.7551 (2)−0.02666 (19)0.1990 (15)
U11U22U33U12U13U23
C10.057 (2)0.068 (2)0.061 (2)0.0066 (18)0.0097 (18)0.017 (2)
C20.078 (3)0.097 (4)0.063 (3)0.021 (3)0.013 (2)0.034 (3)
C30.081 (3)0.096 (4)0.087 (3)0.021 (3)0.023 (3)0.059 (3)
C40.071 (3)0.067 (3)0.091 (3)0.017 (2)0.024 (2)0.047 (2)
C50.0419 (17)0.0469 (18)0.074 (2)0.0123 (14)0.0144 (16)0.0269 (17)
C60.0478 (18)0.0364 (17)0.070 (2)0.0089 (14)0.0104 (16)0.0179 (16)
C70.085 (3)0.0380 (19)0.088 (3)−0.0057 (19)0.010 (2)0.018 (2)
C80.0435 (17)0.0360 (16)0.059 (2)0.0079 (13)0.0117 (15)0.0091 (14)
C90.0549 (19)0.0355 (16)0.057 (2)0.0135 (14)0.0140 (16)0.0098 (14)
C100.064 (2)0.0476 (19)0.066 (2)0.0114 (17)0.0211 (19)0.0144 (17)
C110.087 (3)0.065 (3)0.074 (3)0.018 (2)0.036 (2)0.024 (2)
C120.110 (4)0.077 (3)0.064 (3)0.024 (3)0.034 (3)0.025 (2)
C130.103 (4)0.069 (3)0.057 (3)0.011 (3)0.005 (2)0.003 (2)
C140.066 (2)0.052 (2)0.064 (2)0.0067 (18)0.0079 (19)0.0127 (18)
C150.056 (2)0.0482 (19)0.071 (2)0.0183 (16)0.0217 (18)0.0201 (18)
C160.054 (2)0.068 (3)0.088 (3)0.0254 (19)0.021 (2)0.031 (2)
C170.044 (2)0.077 (3)0.082 (3)0.0107 (19)0.0065 (19)0.026 (2)
C180.0436 (19)0.060 (2)0.072 (2)0.0040 (16)0.0085 (17)0.0109 (19)
C190.0405 (17)0.0453 (18)0.058 (2)0.0058 (13)0.0128 (14)0.0125 (15)
C200.0430 (18)0.0400 (17)0.065 (2)0.0068 (14)0.0089 (16)0.0049 (16)
C210.056 (2)0.045 (2)0.143 (5)0.0061 (18)0.001 (3)−0.008 (3)
C220.0430 (16)0.0393 (16)0.0497 (18)0.0053 (13)0.0122 (14)0.0132 (14)
C230.0410 (16)0.0403 (16)0.0454 (17)0.0072 (12)0.0109 (13)0.0121 (13)
C240.0452 (17)0.0432 (17)0.058 (2)0.0037 (14)0.0114 (15)0.0161 (15)
C250.0426 (18)0.060 (2)0.072 (2)0.0059 (16)0.0120 (17)0.0183 (19)
C260.058 (2)0.062 (2)0.069 (2)0.0254 (18)0.0090 (19)0.020 (2)
C270.069 (2)0.0408 (18)0.074 (3)0.0121 (17)0.008 (2)0.0217 (18)
C280.0500 (19)0.0409 (17)0.058 (2)0.0009 (14)0.0075 (15)0.0135 (15)
C290.077 (3)0.059 (2)0.062 (2)0.008 (2)0.025 (2)0.0147 (19)
C300.086 (3)0.066 (3)0.082 (3)0.024 (2)0.022 (3)0.030 (2)
N10.0419 (15)0.0540 (17)0.0612 (18)0.0060 (12)0.0107 (13)0.0206 (14)
N20.0452 (15)0.0338 (13)0.0583 (17)0.0058 (11)0.0126 (12)0.0118 (12)
N30.0571 (17)0.0368 (14)0.0568 (17)0.0048 (12)0.0127 (14)0.0099 (12)
N40.0423 (14)0.0393 (14)0.0611 (17)0.0074 (11)0.0156 (13)0.0143 (13)
N50.0413 (14)0.0385 (14)0.0512 (15)0.0087 (11)0.0106 (12)0.0073 (12)
N60.0418 (14)0.0362 (14)0.0612 (17)0.0111 (11)0.0069 (12)0.0043 (12)
O10.0632 (15)0.0387 (12)0.0574 (15)−0.0042 (11)0.0175 (12)0.0046 (11)
O20.0510 (13)0.0346 (12)0.0705 (16)0.0058 (10)0.0059 (12)0.0087 (11)
O30.109 (3)0.096 (3)0.079 (2)0.042 (2)0.023 (2)−0.008 (2)
O40.395 (13)0.307 (10)0.265 (9)0.269 (10)0.187 (9)0.224 (9)
Cu0.0526 (3)0.0376 (3)0.0532 (3)−0.00343 (18)0.0129 (2)0.00748 (19)
Cl10.0939 (9)0.0706 (8)0.0948 (9)−0.0064 (6)0.0015 (7)0.0103 (7)
Cl20.0788 (9)0.0975 (11)0.1661 (17)0.0305 (8)−0.0130 (10)0.0181 (11)
Cl30.336 (4)0.1402 (18)0.171 (2)0.017 (2)0.189 (3)0.0433 (16)
Cu—N12.046 (3)C14—H140.9300
N2—N31.367 (4)C15—N41.330 (4)
Cu—N21.938 (3)C15—C161.378 (6)
Cu—N42.196 (3)C15—H150.9300
N5—N61.373 (4)C16—C171.383 (6)
Cu—N52.088 (3)C16—H160.9300
N6—H60.8600C17—C181.385 (6)
Cu—O11.996 (3)C17—H170.9300
Cu—O22.420 (2)C18—C191.388 (5)
C1—N11.324 (5)C18—H180.9300
C1—C21.389 (6)C19—N41.338 (4)
C1—H10.9300C19—C201.493 (5)
C2—C31.364 (7)C20—N51.285 (4)
C2—H20.9300C20—C211.500 (5)
C3—C41.383 (7)C21—H21A0.9600
C3—H30.9300C21—H21B0.9600
C4—C51.385 (6)C21—H21C0.9600
C4—H40.9300C22—O21.228 (4)
C5—N11.367 (5)C22—N61.367 (4)
C5—C61.481 (6)C22—C231.494 (4)
C6—N21.289 (5)C23—C281.390 (5)
C6—C71.496 (5)C23—C241.393 (5)
C7—H7A0.9600C24—C251.382 (5)
C7—H7B0.9600C24—H240.9300
C7—H7C0.9600C25—C261.400 (6)
O1—C81.280 (4)C25—H250.9300
C8—N31.338 (4)C26—C271.376 (6)
C8—C91.485 (5)C26—H260.9300
C9—C141.393 (5)C27—C281.381 (5)
C9—C101.398 (5)C27—H270.9300
C10—C111.370 (6)C28—H280.9300
C10—H100.9300C29—C301.561 (6)
C11—C121.374 (7)C29—Cl31.738 (4)
C11—H110.9300C29—Cl21.747 (5)
C12—C131.370 (7)C29—Cl11.777 (5)
C12—H120.9300C30—O41.173 (7)
C13—C141.360 (7)C30—O31.189 (6)
C13—H130.9300
N1—C1—C2122.2 (4)C20—C21—H21C109.5
N1—C1—H1118.9H21A—C21—H21C109.5
C2—C1—H1118.9H21B—C21—H21C109.5
C3—C2—C1119.1 (5)O2—C22—N6121.8 (3)
C3—C2—H2120.5O2—C22—C23122.1 (3)
C1—C2—H2120.5N6—C22—C23116.1 (3)
C2—C3—C4119.4 (4)C28—C23—C24119.3 (3)
C2—C3—H3120.3C28—C23—C22122.4 (3)
C4—C3—H3120.3C24—C23—C22118.2 (3)
C3—C4—C5119.6 (4)C25—C24—C23120.3 (3)
C3—C4—H4120.2C25—C24—H24119.9
C5—C4—H4120.2C23—C24—H24119.9
N1—C5—C4120.3 (4)C24—C25—C26120.0 (3)
N1—C5—C6114.8 (3)C24—C25—H25120.0
C4—C5—C6125.0 (4)C26—C25—H25120.0
N2—C6—C5113.4 (3)C27—C26—C25119.5 (3)
N2—C6—C7124.2 (4)C27—C26—H26120.3
C5—C6—C7122.4 (3)C25—C26—H26120.3
C6—C7—H7A109.5C26—C27—C28120.7 (3)
C6—C7—H7B109.5C26—C27—H27119.7
H7A—C7—H7B109.5C28—C27—H27119.7
C6—C7—H7C109.5C27—C28—C23120.3 (3)
H7A—C7—H7C109.5C27—C28—H28119.9
H7B—C7—H7C109.5C23—C28—H28119.9
O1—C8—N3125.2 (3)C30—C29—Cl3111.7 (3)
O1—C8—C9118.4 (3)C30—C29—Cl2111.6 (3)
N3—C8—C9116.4 (3)Cl3—C29—Cl2108.5 (3)
C14—C9—C10118.2 (4)C30—C29—Cl1108.9 (3)
C14—C9—C8121.9 (3)Cl3—C29—Cl1109.4 (3)
C10—C9—C8119.9 (3)Cl2—C29—Cl1106.7 (2)
C11—C10—C9120.1 (4)O4—C30—O3127.5 (6)
C11—C10—H10119.9O4—C30—C29117.5 (6)
C9—C10—H10119.9O3—C30—C29115.0 (4)
C10—C11—C12120.6 (4)C1—N1—C5119.5 (3)
C10—C11—H11119.7C1—N1—Cu128.5 (3)
C12—C11—H11119.7C5—N1—Cu112.0 (2)
C13—C12—C11119.7 (5)C6—N2—N3122.9 (3)
C13—C12—H12120.2C6—N2—Cu119.6 (3)
C11—C12—H12120.2N3—N2—Cu117.4 (2)
C14—C13—C12120.7 (5)C8—N3—N2107.9 (3)
C14—C13—H13119.7C15—N4—C19119.1 (3)
C12—C13—H13119.7C15—N4—Cu126.5 (2)
C13—C14—C9120.7 (4)C19—N4—Cu114.4 (2)
C13—C14—H14119.6C20—N5—N6120.0 (3)
C9—C14—H14119.6C20—N5—Cu120.5 (2)
N4—C15—C16122.4 (4)N6—N5—Cu119.4 (2)
N4—C15—H15118.8C22—N6—N5116.8 (3)
C16—C15—H15118.8C22—N6—H6121.6
C15—C16—C17119.2 (4)N5—N6—H6121.6
C15—C16—H16120.4C8—O1—Cu109.8 (2)
C17—C16—H16120.4C22—O2—Cu110.6 (2)
C16—C17—C18118.4 (4)N2—Cu—O179.25 (11)
C16—C17—H17120.8N2—Cu—N180.17 (12)
C18—C17—H17120.8O1—Cu—N1159.01 (12)
C17—C18—C19119.2 (4)N2—Cu—N5162.98 (12)
C17—C18—H18120.4O1—Cu—N5100.25 (11)
C19—C18—H18120.4N1—Cu—N5100.64 (12)
N4—C19—C18121.7 (3)N2—Cu—N4122.15 (11)
N4—C19—C20115.2 (3)O1—Cu—N494.88 (11)
C18—C19—C20123.1 (3)N1—Cu—N492.52 (11)
N5—C20—C19115.0 (3)N5—Cu—N474.87 (10)
N5—C20—C21125.4 (3)N2—Cu—O291.71 (10)
C19—C20—C21119.4 (3)O1—Cu—O288.33 (11)
C20—C21—H21A109.5N1—Cu—O296.41 (11)
C20—C21—H21B109.5N5—Cu—O271.28 (9)
H21A—C21—H21B109.5N4—Cu—O2146.02 (9)
Table 1

Selected bond lengths (Å)

Cu—N12.046 (3)
Cu—N21.938 (3)
Cu—N42.196 (3)
Cu—N52.088 (3)
Cu—O11.996 (3)
Cu—O22.420 (2)
  3 in total

1.  Structural chemistry and In vitro antitubercular activity of acetylpyridine benzoyl hydrazone and its copper complex against Mycobacterium smegmatis.

Authors:  Jayendra Patole; Uday Sandbhor; Subhash Padhye; Dileep N Deobagkar; Christopher E Anson; Annie Powell
Journal:  Bioorg Med Chem Lett       Date:  2003-01-06       Impact factor: 2.823

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Bis{N'-[1-(2-pyrid-yl)ethyl-idene-κN]benzohydrazidato-κN',O}nickel(II).

Authors:  Amitabha Datta; Nien-Tsu Chuang; Ming-Han Sie; Jui-Hsien Huang; Hon Man Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-03
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.