Literature DB >> 22065331

5-Meth-oxy-2-{[4-(morpholin-4-yl)phen-yl]imino-meth-yl}phenol.

K Dhahagani, K Manvizhi, G Chakkaravarthi, G Anbalagan, G Rajagopal.   

Abstract

In the title compound, C(18)H(20)N(2)O(3), the dihedral angle between the two aromatic rings is 33.66 (6)°. The morpholine ring adopts a chair conformation. The mol-ecular structure is stabilized by an intra-molecular O-H⋯N hydrogen bond. In the crystal, mol-ecules are linked via weak inter-molecular C-H⋯O and C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 22065331      PMCID: PMC3200704          DOI: 10.1107/S1600536811034659

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of morpholine derivatives, see: Lan et al. (2010 ▶); Raparti et al. (2009 ▶). For standard bond lengths, see: Allen et al. (1987 ▶). For a related structure, see: Yang et al. (2011 ▶). For the definition of puckering parameters, see: Cremer & Pople (1975 ▶). For graph-set notation, see: Etter et al. (1990 ▶).

Experimental

Crystal data

C18H20N2O3 M = 312.36 Monoclinic, a = 10.623 (6) Å b = 9.106 (5) Å c = 16.640 (5) Å β = 97.446 (6)° V = 1596.2 (13) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 295 K 0.28 × 0.24 × 0.20 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.975, T max = 0.982 21296 measured reflections 4941 independent reflections 2761 reflections with I > 2σ(I) R int = 0.031 Standard reflections: 0

Refinement

R[F 2 > 2σ(F 2)] = 0.066 wR(F 2) = 0.204 S = 1.05 4941 reflections 210 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811034659/bt5628sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034659/bt5628Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811034659/bt5628Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H20N2O3F(000) = 664
Mr = 312.36Dx = 1.300 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4380 reflections
a = 10.623 (6) Åθ = 2.5–30.6°
b = 9.106 (5) ŵ = 0.09 mm1
c = 16.640 (5) ÅT = 295 K
β = 97.446 (6)°Block, colourless
V = 1596.2 (13) Å30.28 × 0.24 × 0.20 mm
Z = 4
Bruker Kappa APEXII diffractometer4941 independent reflections
Radiation source: fine-focus sealed tube2761 reflections with I > 2σ(I)
graphiteRint = 0.031
ω and φ scansθmax = 30.7°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→15
Tmin = 0.975, Tmax = 0.982k = −12→12
21296 measured reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.066Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.204H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.089P)2 + 0.3452P] where P = (Fo2 + 2Fc2)/3
4941 reflections(Δ/σ)max < 0.001
210 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.27 e Å3
xyzUiso*/Ueq
C10.4258 (2)0.3507 (4)0.86902 (17)0.0858 (8)
H1A0.35920.42210.85390.103*
H1B0.39740.25750.84480.103*
C20.5421 (2)0.3978 (3)0.83441 (17)0.0756 (7)
H2A0.52650.39210.77580.091*
H2B0.56090.49930.84910.091*
C30.6624 (2)0.2790 (4)0.94823 (13)0.0993 (11)
H3A0.69770.36490.97740.119*
H3B0.72140.19850.96050.119*
C40.5395 (2)0.2410 (4)0.97652 (15)0.1022 (11)
H4A0.51490.14350.95700.123*
H4B0.55190.23741.03530.123*
C50.75890 (16)0.31894 (19)0.82520 (9)0.0409 (4)
C60.76084 (19)0.3993 (2)0.75393 (12)0.0559 (5)
H60.68850.45010.73200.067*
C70.86803 (19)0.4047 (2)0.71547 (11)0.0549 (5)
H70.86670.45990.66830.066*
C80.97710 (16)0.33047 (18)0.74518 (9)0.0396 (4)
C90.97771 (17)0.2539 (2)0.81688 (10)0.0472 (4)
H91.05100.20510.83900.057*
C100.87091 (18)0.2490 (2)0.85609 (10)0.0482 (4)
H100.87410.19740.90450.058*
C111.16925 (16)0.24530 (19)0.70644 (10)0.0421 (4)
H111.15950.16030.73600.051*
C121.28060 (16)0.26119 (18)0.66578 (9)0.0393 (4)
C131.30539 (17)0.39126 (18)0.62486 (10)0.0402 (4)
C141.41223 (17)0.40335 (19)0.58674 (10)0.0450 (4)
H141.42840.49020.56050.054*
C151.49540 (17)0.2874 (2)0.58729 (10)0.0461 (4)
C161.47404 (19)0.1582 (2)0.62718 (13)0.0559 (5)
H161.53070.08020.62800.067*
C171.36751 (19)0.1477 (2)0.66548 (12)0.0532 (5)
H171.35300.06090.69230.064*
C181.6838 (2)0.1948 (3)0.54114 (18)0.0868 (8)
H18A1.72260.16800.59440.130*
H18B1.74820.22610.50940.130*
H18C1.63970.11170.51570.130*
N10.64900 (14)0.30818 (19)0.86311 (8)0.0491 (4)
N21.08397 (14)0.34434 (16)0.70305 (8)0.0420 (3)
O10.44192 (16)0.3353 (2)0.95242 (11)0.0846 (6)
O21.22521 (14)0.50605 (14)0.62211 (9)0.0607 (4)
H21.16350.48390.64450.091*
O31.59655 (14)0.31149 (17)0.54691 (9)0.0650 (4)
U11U22U33U12U13U23
C10.0467 (13)0.118 (2)0.0978 (19)0.0095 (14)0.0282 (13)0.0384 (16)
C20.0460 (12)0.0875 (17)0.0984 (18)0.0089 (12)0.0296 (12)0.0292 (14)
C30.0464 (13)0.211 (4)0.0423 (11)−0.0168 (18)0.0123 (9)0.0158 (15)
C40.0513 (14)0.204 (4)0.0542 (13)0.0027 (19)0.0187 (11)0.0345 (17)
C50.0358 (9)0.0504 (10)0.0378 (8)−0.0008 (7)0.0096 (7)0.0001 (7)
C60.0391 (10)0.0789 (14)0.0515 (10)0.0145 (9)0.0124 (8)0.0206 (9)
C70.0457 (11)0.0742 (13)0.0474 (9)0.0086 (9)0.0165 (8)0.0204 (9)
C80.0379 (9)0.0430 (9)0.0400 (8)−0.0018 (7)0.0131 (7)−0.0021 (6)
C90.0398 (9)0.0576 (11)0.0457 (9)0.0105 (8)0.0118 (7)0.0082 (8)
C100.0458 (10)0.0589 (11)0.0422 (8)0.0064 (9)0.0142 (8)0.0119 (8)
C110.0431 (10)0.0409 (9)0.0443 (8)−0.0020 (8)0.0131 (7)0.0012 (7)
C120.0381 (9)0.0408 (9)0.0407 (8)0.0013 (7)0.0119 (7)0.0012 (6)
C130.0420 (10)0.0385 (8)0.0415 (8)0.0030 (7)0.0112 (7)−0.0010 (6)
C140.0479 (11)0.0416 (9)0.0483 (9)−0.0017 (8)0.0169 (8)0.0034 (7)
C150.0383 (9)0.0576 (11)0.0454 (9)0.0020 (8)0.0161 (7)0.0031 (8)
C160.0473 (11)0.0549 (11)0.0693 (12)0.0179 (9)0.0218 (9)0.0137 (9)
C170.0519 (11)0.0478 (10)0.0640 (11)0.0099 (9)0.0228 (9)0.0160 (8)
C180.0587 (15)0.106 (2)0.105 (2)0.0246 (14)0.0441 (14)0.0078 (16)
N10.0366 (8)0.0714 (11)0.0413 (7)0.0044 (7)0.0120 (6)0.0086 (7)
N20.0387 (8)0.0472 (8)0.0425 (7)0.0013 (6)0.0141 (6)−0.0004 (6)
O10.0549 (10)0.1205 (15)0.0859 (12)−0.0139 (10)0.0373 (9)−0.0139 (10)
O20.0624 (9)0.0448 (7)0.0820 (10)0.0152 (7)0.0362 (8)0.0122 (6)
O30.0515 (8)0.0765 (10)0.0743 (9)0.0092 (7)0.0351 (7)0.0138 (7)
C1—O11.383 (3)C9—C101.381 (2)
C1—C21.492 (3)C9—H90.9300
C1—H1A0.9700C10—H100.9300
C1—H1B0.9700C11—N21.274 (2)
C2—N11.430 (3)C11—C121.444 (2)
C2—H2A0.9700C11—H110.9300
C2—H2B0.9700C12—C171.386 (2)
C3—N11.430 (3)C12—C131.408 (2)
C3—C41.485 (3)C13—O21.345 (2)
C3—H3A0.9700C13—C141.374 (2)
C3—H3B0.9700C14—C151.376 (3)
C4—O11.365 (3)C14—H140.9300
C4—H4A0.9700C15—O31.357 (2)
C4—H4B0.9700C15—C161.384 (3)
C5—C101.388 (2)C16—C171.372 (3)
C5—C61.396 (2)C16—H160.9300
C5—N11.400 (2)C17—H170.9300
C6—C71.378 (3)C18—O31.421 (3)
C6—H60.9300C18—H18A0.9600
C7—C81.377 (3)C18—H18B0.9600
C7—H70.9300C18—H18C0.9600
C8—C91.381 (2)O2—H20.8200
C8—N21.415 (2)
O1—C1—C2114.5 (2)C8—C9—H9119.6
O1—C1—H1A108.6C9—C10—C5121.83 (16)
C2—C1—H1A108.6C9—C10—H10119.1
O1—C1—H1B108.6C5—C10—H10119.1
C2—C1—H1B108.6N2—C11—C12121.94 (16)
H1A—C1—H1B107.6N2—C11—H11119.0
N1—C2—C1111.6 (2)C12—C11—H11119.0
N1—C2—H2A109.3C17—C12—C13117.33 (16)
C1—C2—H2A109.3C17—C12—C11120.88 (16)
N1—C2—H2B109.3C13—C12—C11121.79 (15)
C1—C2—H2B109.3O2—C13—C14118.62 (15)
H2A—C2—H2B108.0O2—C13—C12120.85 (16)
N1—C3—C4112.25 (18)C14—C13—C12120.53 (15)
N1—C3—H3A109.2C13—C14—C15120.22 (16)
C4—C3—H3A109.2C13—C14—H14119.9
N1—C3—H3B109.2C15—C14—H14119.9
C4—C3—H3B109.2O3—C15—C14114.92 (16)
H3A—C3—H3B107.9O3—C15—C16124.38 (17)
O1—C4—C3115.2 (3)C14—C15—C16120.70 (17)
O1—C4—H4A108.5C17—C16—C15118.59 (17)
C3—C4—H4A108.5C17—C16—H16120.7
O1—C4—H4B108.5C15—C16—H16120.7
C3—C4—H4B108.5C16—C17—C12122.63 (17)
H4A—C4—H4B107.5C16—C17—H17118.7
C10—C5—C6116.66 (16)C12—C17—H17118.7
C10—C5—N1121.72 (15)O3—C18—H18A109.5
C6—C5—N1121.62 (16)O3—C18—H18B109.5
C7—C6—C5121.18 (17)H18A—C18—H18B109.5
C7—C6—H6119.4O3—C18—H18C109.5
C5—C6—H6119.4H18A—C18—H18C109.5
C8—C7—C6121.55 (17)H18B—C18—H18C109.5
C8—C7—H7119.2C5—N1—C2118.82 (16)
C6—C7—H7119.2C5—N1—C3118.53 (16)
C7—C8—C9117.88 (16)C2—N1—C3114.18 (19)
C7—C8—N2118.04 (15)C11—N2—C8121.75 (15)
C9—C8—N2123.97 (16)C4—O1—C1110.42 (19)
C10—C9—C8120.83 (16)C13—O2—H2109.5
C10—C9—H9119.6C15—O3—C18118.55 (17)
O1—C1—C2—N150.7 (3)C13—C14—C15—C16−1.1 (3)
N1—C3—C4—O1−49.6 (4)O3—C15—C16—C17−179.70 (19)
C10—C5—C6—C71.8 (3)C14—C15—C16—C170.6 (3)
N1—C5—C6—C7−177.56 (19)C15—C16—C17—C120.0 (3)
C5—C6—C7—C80.5 (3)C13—C12—C17—C16−0.2 (3)
C6—C7—C8—C9−2.3 (3)C11—C12—C17—C16179.64 (19)
C6—C7—C8—N2−178.64 (18)C10—C5—N1—C2171.9 (2)
C7—C8—C9—C101.8 (3)C6—C5—N1—C2−8.8 (3)
N2—C8—C9—C10177.85 (17)C10—C5—N1—C325.7 (3)
C8—C9—C10—C50.6 (3)C6—C5—N1—C3−155.0 (2)
C6—C5—C10—C9−2.3 (3)C1—C2—N1—C5167.9 (2)
N1—C5—C10—C9177.01 (17)C1—C2—N1—C3−44.4 (3)
N2—C11—C12—C17−175.33 (17)C4—C3—N1—C5−168.5 (3)
N2—C11—C12—C134.5 (3)C4—C3—N1—C243.8 (4)
C17—C12—C13—O2179.68 (17)C12—C11—N2—C8−177.88 (15)
C11—C12—C13—O2−0.2 (3)C7—C8—N2—C11−154.33 (18)
C17—C12—C13—C14−0.2 (3)C9—C8—N2—C1129.6 (3)
C11—C12—C13—C14179.93 (16)C3—C4—O1—C154.7 (4)
O2—C13—C14—C15−179.05 (17)C2—C1—O1—C4−55.3 (3)
C12—C13—C14—C150.9 (3)C14—C15—O3—C18−177.0 (2)
C13—C14—C15—O3179.24 (16)C16—C15—O3—C183.3 (3)
Cg2 and Cg3 are the centroids of the C5–C10 and C12–C17 rings, respectively.
D—H···AD—HH···AD···AD—H···A
O2—H2···N20.821.872.600 (2)148
C14—H14···O3i0.932.533.412 (3)158
C18—H18B···O1ii0.962.443.289 (3)148
C2—H2A···Cg3iii0.972.923.799 (4)152
C16—H16···Cg2iv0.932.863.663 (3)146
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 and Cg3 are the centroids of the C5–C10 and C12–C17 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯N20.821.872.600 (2)148
C14—H14⋯O3i0.932.533.412 (3)158
C18—H18B⋯O1ii0.962.443.289 (3)148
C2—H2ACg3iii0.972.923.799 (4)152
C16—H16⋯Cg2iv0.932.863.663 (3)146

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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