Literature DB >> 22065133

[1-(1H-Imidazo[4,5-f][1,10]phenanthro-lin-2-yl)naphthalen-2-ol-κN,N]diiodidomercury(II).

Tian-Le Li1.   

Abstract

In the title compound, [HgI(2)(C(23)H(14)N(4)O)], the Hg(II) atom is four-coordinated by two N atoms from one 1-(1H-imidazo[4,5-f][1,10]phenanthrolin-2-yl)naphthalen-2-ol ligand and by two I atoms in a distorted tetra-hedral environment. An intra-molecular O-H⋯N hydrogen bond stabilizes the mol-ecular conformation and an inter-molecular N-H⋯I inter-action stabilizes the crystal packing.

Entities:  

Year:  2011        PMID: 22065133      PMCID: PMC3201534          DOI: 10.1107/S1600536811037160

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For information about the organic ligand 1-(1H-imidazo[4,5-f][1,10]phenanthrolin-2-yl)naphthalen-2-ol), see: Wang et al. (2010 ▶).

Experimental

Crystal data

[HgI2(C23H14N4O)] M = 816.77 Monoclinic, a = 14.4271 (10) Å b = 7.3026 (5) Å c = 21.1337 (15) Å β = 94.472 (1)° V = 2219.8 (3) Å3 Z = 4 Mo Kα radiation μ = 9.74 mm−1 T = 293 K 0.17 × 0.14 × 0.12 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.41, T max = 0.64 11586 measured reflections 4351 independent reflections 3217 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.057 S = 1.01 4351 reflections 284 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.67 e Å−3 Δρmin = −0.84 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811037160/bt5643sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811037160/bt5643Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[HgI2(C23H14N4O)]F(000) = 1496
Mr = 816.77Dx = 2.444 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4351 reflections
a = 14.4271 (10) Åθ = 1.9–26.0°
b = 7.3026 (5) ŵ = 9.74 mm1
c = 21.1337 (15) ÅT = 293 K
β = 94.472 (1)°Block, pale yellow
V = 2219.8 (3) Å30.17 × 0.14 × 0.12 mm
Z = 4
Bruker SMART APEX diffractometer4351 independent reflections
Radiation source: fine-focus sealed tube3217 reflections with I > 2σ(I)
graphiteRint = 0.031
φ and ω scansθmax = 26.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −16→17
Tmin = 0.41, Tmax = 0.64k = −7→9
11586 measured reflectionsl = −25→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.057H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0207P)2 + 0.5359P] where P = (Fo2 + 2Fc2)/3
4351 reflections(Δ/σ)max = 0.002
284 parametersΔρmax = 0.67 e Å3
0 restraintsΔρmin = −0.84 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C20.8132 (4)0.3909 (8)−0.2038 (3)0.0445 (14)
H20.85490.3558−0.23300.053*
C70.6301 (4)0.7203 (7)0.0288 (2)0.0479 (15)
H70.65920.75520.06770.058*
C80.5367 (4)0.7611 (8)0.0162 (2)0.0465 (14)
H80.50470.82450.04590.056*
C90.4920 (4)0.7077 (7)−0.0400 (2)0.0387 (13)
H90.42900.7309−0.04880.046*
C100.5440 (3)0.6156 (6)−0.0847 (2)0.0292 (11)
C110.5070 (3)0.5568 (6)−0.1458 (2)0.0291 (11)
C130.4226 (3)0.4818 (6)−0.2345 (2)0.0308 (11)
C140.3454 (3)0.4641 (7)−0.2832 (2)0.0344 (12)
C150.3641 (4)0.5059 (7)−0.3451 (2)0.0434 (13)
C160.2540 (4)0.4097 (8)−0.2700 (3)0.0424 (14)
C170.2914 (5)0.5155 (8)−0.3934 (3)0.0595 (18)
H170.30390.5523−0.43400.071*
C180.2032 (5)0.4714 (8)−0.3811 (3)0.0593 (18)
H180.15570.4787−0.41330.071*
C190.1830 (4)0.4155 (8)−0.3208 (3)0.0546 (17)
C200.0924 (5)0.3593 (10)−0.3092 (4)0.083 (2)
H200.04510.3663−0.34160.099*
C210.0735 (5)0.2951 (11)−0.2514 (5)0.090 (3)
H210.01310.2589−0.24480.108*
C220.1429 (5)0.2820 (10)−0.2013 (3)0.075 (2)
H220.12940.2351−0.16210.091*
C230.2314 (4)0.3399 (8)−0.2110 (3)0.0563 (17)
H230.27750.3327−0.17780.068*
N30.4179 (3)0.5490 (5)−0.17388 (18)0.0316 (10)
H3A0.36810.5804−0.15670.038*
O10.4506 (3)0.5473 (6)−0.36141 (19)0.0563 (11)
H1A0.488 (5)0.518 (10)−0.326 (4)0.12 (3)*
C10.8439 (4)0.4232 (8)−0.1411 (3)0.0466 (14)
H10.90660.4048−0.12900.056*
C30.7213 (4)0.4112 (7)−0.2222 (2)0.0395 (13)
H30.69900.3871−0.26390.047*
C40.6609 (3)0.4691 (6)−0.1774 (2)0.0313 (11)
C50.6970 (3)0.5071 (6)−0.1156 (2)0.0323 (11)
C60.6386 (3)0.5855 (6)−0.0694 (2)0.0298 (11)
C120.5631 (3)0.4922 (6)−0.1909 (2)0.0301 (11)
N10.6800 (3)0.6338 (6)−0.01211 (19)0.0390 (11)
N20.7895 (3)0.4787 (5)−0.09743 (19)0.0375 (10)
N40.5108 (3)0.4486 (5)−0.24611 (18)0.0316 (10)
Hg10.837535 (16)0.50252 (3)0.013119 (11)0.05187 (8)
I10.78377 (3)0.23045 (5)0.087966 (19)0.05635 (12)
I20.96077 (3)0.77042 (5)0.026201 (19)0.05224 (12)
U11U22U33U12U13U23
C20.039 (3)0.053 (4)0.043 (3)0.006 (3)0.014 (3)0.005 (3)
C70.070 (4)0.047 (4)0.026 (3)−0.011 (3)0.003 (3)−0.006 (3)
C80.064 (4)0.047 (4)0.029 (3)0.001 (3)0.010 (3)−0.004 (3)
C90.041 (3)0.041 (3)0.035 (3)0.005 (2)0.013 (2)0.003 (3)
C100.035 (3)0.026 (3)0.027 (3)−0.002 (2)0.003 (2)0.004 (2)
C110.029 (3)0.033 (3)0.025 (3)0.000 (2)0.003 (2)0.001 (2)
C130.042 (3)0.026 (3)0.025 (2)−0.003 (2)0.005 (2)0.002 (2)
C140.040 (3)0.037 (3)0.026 (3)0.000 (2)0.002 (2)−0.003 (2)
C150.060 (4)0.033 (3)0.035 (3)0.006 (3)−0.007 (3)−0.003 (3)
C160.037 (3)0.044 (3)0.046 (3)0.007 (3)0.000 (3)−0.015 (3)
C170.099 (6)0.042 (4)0.034 (3)0.013 (4)−0.015 (3)−0.005 (3)
C180.073 (5)0.049 (4)0.050 (4)0.018 (3)−0.029 (3)−0.016 (3)
C190.046 (4)0.044 (4)0.070 (5)0.015 (3)−0.020 (3)−0.021 (3)
C200.043 (5)0.086 (6)0.115 (7)0.014 (4)−0.016 (4)−0.039 (5)
C210.037 (4)0.095 (6)0.140 (8)−0.002 (4)0.018 (5)−0.048 (6)
C220.060 (5)0.094 (6)0.077 (5)−0.018 (4)0.033 (4)−0.033 (4)
C230.049 (4)0.071 (4)0.051 (4)−0.009 (3)0.013 (3)−0.024 (3)
N30.035 (2)0.034 (2)0.026 (2)−0.0019 (18)0.0057 (18)−0.0040 (18)
O10.071 (3)0.066 (3)0.033 (2)−0.006 (2)0.012 (2)0.001 (2)
C10.029 (3)0.058 (4)0.052 (4)0.003 (3)0.004 (3)0.007 (3)
C30.042 (3)0.042 (3)0.035 (3)0.004 (2)0.005 (3)−0.001 (3)
C40.033 (3)0.030 (3)0.031 (3)0.000 (2)0.006 (2)0.002 (2)
C50.034 (3)0.024 (3)0.038 (3)−0.002 (2)0.002 (2)0.003 (2)
C60.039 (3)0.027 (3)0.024 (3)−0.006 (2)0.002 (2)0.006 (2)
C120.034 (3)0.028 (3)0.028 (3)−0.002 (2)0.002 (2)0.001 (2)
N10.047 (3)0.038 (3)0.031 (2)−0.006 (2)−0.004 (2)0.003 (2)
N20.032 (2)0.040 (3)0.040 (2)0.000 (2)−0.0001 (19)0.004 (2)
N40.033 (2)0.037 (2)0.025 (2)−0.0007 (18)0.0039 (18)−0.0021 (18)
Hg10.04968 (14)0.05769 (16)0.04649 (14)−0.01629 (12)−0.00742 (10)0.00740 (13)
I10.0555 (2)0.0551 (3)0.0607 (3)0.00396 (19)0.0187 (2)0.0143 (2)
I20.0464 (2)0.0458 (2)0.0623 (3)−0.00957 (18)−0.00981 (18)0.0071 (2)
C2—C31.361 (7)C18—H180.9300
C2—C11.385 (7)C19—C201.410 (9)
C2—H20.9300C20—C211.357 (11)
C7—N11.327 (6)C20—H200.9300
C7—C81.385 (8)C21—C221.403 (10)
C7—H70.9300C21—H210.9300
C8—C91.363 (7)C22—C231.375 (8)
C8—H80.9300C22—H220.9300
C9—C101.420 (6)C23—H230.9300
C9—H90.9300N3—H3A0.8600
C10—C61.396 (6)O1—H1A0.91 (8)
C10—C111.425 (6)C1—N21.322 (6)
C11—N31.375 (6)C1—H10.9300
C11—C121.381 (6)C3—C41.402 (6)
C13—N41.337 (6)C3—H30.9300
C13—N31.378 (6)C4—C51.396 (7)
C13—C141.463 (6)C4—C121.427 (6)
C14—C151.391 (7)C5—N21.374 (6)
C14—C161.425 (7)C5—C61.456 (6)
C15—O11.355 (7)C6—N11.354 (6)
C15—C171.407 (8)C12—N41.376 (6)
C16—C231.409 (8)N1—Hg12.486 (4)
C16—C191.425 (7)N2—Hg12.391 (4)
C17—C181.358 (9)Hg1—I22.6435 (4)
C17—H170.9300Hg1—I12.6912 (5)
C18—C191.389 (9)
C3—C2—C1119.2 (5)C20—C21—H21119.3
C3—C2—H2120.4C22—C21—H21119.3
C1—C2—H2120.4C23—C22—C21118.9 (7)
N1—C7—C8123.2 (5)C23—C22—H22120.6
N1—C7—H7118.4C21—C22—H22120.6
C8—C7—H7118.4C22—C23—C16121.7 (6)
C9—C8—C7119.4 (5)C22—C23—H23119.2
C9—C8—H8120.3C16—C23—H23119.2
C7—C8—H8120.3C11—N3—C13107.6 (4)
C8—C9—C10118.5 (5)C11—N3—H3A126.2
C8—C9—H9120.8C13—N3—H3A126.2
C10—C9—H9120.8C15—O1—H1A103 (5)
C6—C10—C9118.6 (5)N2—C1—C2123.9 (5)
C6—C10—C11116.9 (4)N2—C1—H1118.1
C9—C10—C11124.5 (4)C2—C1—H1118.1
N3—C11—C12105.5 (4)C2—C3—C4118.9 (5)
N3—C11—C10132.4 (4)C2—C3—H3120.5
C12—C11—C10122.1 (4)C4—C3—H3120.5
N4—C13—N3110.6 (4)C5—C4—C3119.0 (4)
N4—C13—C14122.6 (4)C5—C4—C12117.1 (4)
N3—C13—C14126.5 (4)C3—C4—C12123.9 (5)
C15—C14—C16119.7 (5)N2—C5—C4121.1 (4)
C15—C14—C13116.7 (4)N2—C5—C6118.1 (4)
C16—C14—C13123.6 (4)C4—C5—C6120.8 (4)
O1—C15—C14122.6 (5)N1—C6—C10121.4 (5)
O1—C15—C17117.0 (5)N1—C6—C5117.7 (4)
C14—C15—C17120.3 (6)C10—C6—C5120.9 (4)
C23—C16—C19118.4 (5)N4—C12—C11110.6 (4)
C23—C16—C14123.7 (5)N4—C12—C4127.6 (4)
C19—C16—C14117.8 (5)C11—C12—C4121.7 (4)
C18—C17—C15120.4 (6)C7—N1—C6118.8 (5)
C18—C17—H17119.8C7—N1—Hg1125.3 (3)
C15—C17—H17119.8C6—N1—Hg1115.0 (3)
C17—C18—C19120.8 (6)C1—N2—C5117.9 (4)
C17—C18—H18119.6C1—N2—Hg1124.2 (3)
C19—C18—H18119.6C5—N2—Hg1117.6 (3)
C18—C19—C20120.6 (6)C13—N4—C12105.6 (4)
C18—C19—C16120.6 (6)N2—Hg1—N168.14 (14)
C20—C19—C16118.8 (7)N2—Hg1—I2107.31 (9)
C21—C20—C19120.8 (7)N1—Hg1—I2109.47 (10)
C21—C20—H20119.6N2—Hg1—I1116.46 (9)
C19—C20—H20119.6N1—Hg1—I196.33 (9)
C20—C21—C22121.4 (7)I2—Hg1—I1135.010 (15)
D—H···AD—HH···AD···AD—H···A
N3—H3A···I1i0.863.053.896 (4)167.
O1—H1A···N40.91 (8)1.77 (8)2.623 (6)155 (7)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯I1i0.863.053.896 (4)167
O1—H1A⋯N40.91 (8)1.77 (8)2.623 (6)155 (7)

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  2 in total

1.  Crystal structure of 3-[4-(1H-imidazol-1-yl)phen-yl]-2-(4-nitro-phen-yl)prop-2-ene-nitrile.

Authors:  Ting-Ting Yu; Ming-Di Yang; Jing-Jing Pi; Yu-Bin Zhang; Jian-Hua Yu
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-08-06

2.  Bis((E)-2-{3-[4-(1H-imidazol-1-yl-κN (3))styr-yl]-5,5-di-methyl-cyclo-hex-2-enyl-idene}malono-nitrile)-diiodido-mercury(II).

Authors:  Wen-Gang Xi; Zhi-Chao Wu; Hong-Ping Zhou
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-21
  2 in total

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