Literature DB >> 22065131

3-(2-Bromo-acet-yl)-6-fluoro-2H-chromen-2-one.

H N Harishkumar, Sudarshan Mahapatra, K N Venugopala, Kittappa Mariswamy Mahadevan.   

Abstract

The non-H atoms of the title compound, C(11)H(6)BrFO(3), are essentially coplanar (r.m.s. deviation for all non-H atoms = 0.074 Å). In the crystal, the molecules are linked by C-H⋯O and C-H⋯Br inter-actions.

Entities:  

Year:  2011        PMID: 22065131      PMCID: PMC3200785          DOI: 10.1107/S1600536811030960

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to coumarins, see: Hooper et al.,(1982 ▶); Morris et al. (1971 ▶); Khalfan et al. (1987 ▶); Domagala et al. (1996 ▶); Eid et al. (1994 ▶).

Experimental

Crystal data

C11H6BrFO3 M = 285.06 Monoclinic, a = 4.0590 (5) Å b = 11.7719 (13) Å c = 21.608 (2) Å β = 94.318 (10)° V = 1029.6 (2) Å3 Z = 4 Mo Kα radiation μ = 3.99 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Bruker SMART CCD area-detector Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.201, T max = 0.506 10491 measured reflections 2007 independent reflections 1438 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.065 S = 0.95 2007 reflections 145 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.37 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Window (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811030960/bt5592sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811030960/bt5592Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811030960/bt5592Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H6BrFO3F(000) = 560
Mr = 285.06Dx = 1.839 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2007 reflections
a = 4.0590 (5) Åθ = 3.3–26.0°
b = 11.7719 (13) ŵ = 3.99 mm1
c = 21.608 (2) ÅT = 293 K
β = 94.318 (10)°Needle, yellow
V = 1029.6 (2) Å30.30 × 0.20 × 0.10 mm
Z = 4
Bruker SMART CCD area-detector diffractometer2007 independent reflections
Radiation source: Enhance (Mo) X-ray Source1438 reflections with I > 2σ(I)
graphiteRint = 0.036
Detector resolution: 16.0839 pixels mm-1θmax = 26.0°, θmin = 3.3°
ω scansh = −5→4
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −14→14
Tmin = 0.201, Tmax = 0.506l = −26→26
10491 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.065H-atom parameters constrained
S = 0.95w = 1/[σ2(Fo2) + (0.0335P)2] where P = (Fo2 + 2Fc2)/3
2007 reflections(Δ/σ)max = 0.001
145 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.29450 (7)0.10699 (2)−0.07092 (1)0.0553 (1)
F10.1896 (5)0.78595 (14)0.21546 (8)0.0728 (7)
O1−0.1428 (4)0.34429 (15)0.16976 (8)0.0450 (6)
O2−0.1904 (5)0.19171 (16)0.11181 (9)0.0630 (8)
O30.3915 (5)0.34027 (16)−0.01840 (9)0.0606 (8)
C1−0.0789 (7)0.2860 (2)0.11695 (12)0.0405 (9)
C20.1133 (6)0.3458 (2)0.07253 (11)0.0320 (8)
C30.1926 (6)0.4562 (2)0.08252 (11)0.0351 (9)
C40.1121 (6)0.5154 (2)0.13648 (11)0.0338 (8)
C50.1933 (7)0.6296 (2)0.14854 (13)0.0428 (10)
C60.1139 (7)0.6754 (2)0.20335 (14)0.0478 (10)
C7−0.0399 (7)0.6145 (3)0.24778 (13)0.0531 (11)
C8−0.1208 (7)0.5031 (3)0.23639 (12)0.0487 (10)
C9−0.0485 (6)0.4551 (2)0.18082 (11)0.0372 (9)
C100.2260 (6)0.2882 (2)0.01622 (12)0.0362 (9)
C110.1383 (7)0.1654 (2)0.00482 (12)0.0417 (9)
H30.304280.494740.052890.0421*
H50.298590.672850.119870.0514*
H7−0.087580.648730.284850.0637*
H8−0.222910.460500.265720.0585*
H11A−0.100000.157230.003180.0500*
H11B0.231800.120390.039400.0500*
U11U22U33U12U13U23
Br10.0651 (2)0.0464 (2)0.0556 (2)−0.0025 (2)0.0125 (2)−0.0186 (2)
F10.1021 (14)0.0435 (11)0.0734 (12)−0.0040 (10)0.0097 (10)−0.0273 (9)
O10.0634 (12)0.0387 (11)0.0351 (10)−0.0073 (10)0.0176 (9)−0.0014 (9)
O20.0971 (16)0.0386 (13)0.0576 (13)−0.0262 (12)0.0342 (12)−0.0060 (10)
O30.0977 (16)0.0382 (11)0.0506 (12)−0.0227 (12)0.0377 (12)−0.0104 (10)
C10.0487 (17)0.0389 (17)0.0346 (15)−0.0033 (14)0.0086 (13)0.0010 (13)
C20.0372 (15)0.0297 (14)0.0297 (14)−0.0041 (12)0.0070 (12)0.0004 (11)
C30.0406 (15)0.0320 (16)0.0331 (15)−0.0054 (12)0.0065 (12)0.0017 (11)
C40.0361 (14)0.0329 (15)0.0324 (14)0.0025 (12)0.0027 (12)−0.0025 (12)
C50.0499 (17)0.0359 (17)0.0433 (16)−0.0014 (13)0.0075 (13)−0.0040 (12)
C60.0550 (18)0.0336 (17)0.0540 (19)0.0068 (15)−0.0013 (16)−0.0144 (14)
C70.063 (2)0.055 (2)0.0413 (17)0.0138 (17)0.0044 (15)−0.0154 (15)
C80.0570 (19)0.0529 (19)0.0376 (16)0.0047 (16)0.0123 (14)−0.0051 (14)
C90.0416 (16)0.0338 (16)0.0363 (15)0.0039 (13)0.0037 (13)−0.0037 (12)
C100.0407 (15)0.0321 (16)0.0361 (15)−0.0031 (12)0.0053 (12)−0.0013 (12)
C110.0477 (16)0.0343 (16)0.0446 (16)−0.0053 (14)0.0142 (13)−0.0095 (12)
Br1—C111.926 (3)C5—C61.362 (4)
F1—C61.358 (3)C6—C71.384 (4)
O1—C11.373 (3)C7—C81.370 (5)
O1—C91.375 (3)C8—C91.379 (4)
O2—C11.201 (3)C10—C111.505 (3)
O3—C101.209 (3)C3—H30.9300
C1—C21.462 (4)C5—H50.9300
C2—C31.352 (3)C7—H70.9300
C2—C101.494 (3)C8—H80.9300
C3—C41.418 (3)C11—H11A0.9700
C4—C51.404 (3)C11—H11B0.9700
C4—C91.393 (3)
Br1···O32.9861 (19)C5···O3vi3.404 (3)
Br1···C11i3.747 (3)C6···C7i3.569 (4)
Br1···H11Ai2.8900C7···C6v3.569 (4)
F1···O1ii3.053 (3)C8···C5v3.574 (4)
F1···C8ii3.226 (4)C8···F1iv3.226 (4)
F1···C9ii3.259 (3)C9···C4v3.541 (3)
F1···H8iii2.8400C9···F1iv3.259 (3)
O1···F1iv3.053 (3)C10···C1i3.431 (4)
O2···C112.772 (3)C10···O2i3.230 (3)
O2···C2v3.411 (3)C11···Br1v3.747 (3)
O2···C10v3.230 (3)C11···O22.772 (3)
O3···C2i3.403 (3)C1···H7vii3.0600
O3···C3vi3.296 (3)C1···H11A2.8800
O3···C5vi3.404 (3)C1···H11B2.9200
O3···Br12.9861 (19)C11···H11Ai3.1000
O1···H7vii2.7600H3···O32.4300
O2···H7vii2.5200H3···H52.5500
O2···H11B2.5500H3···O3vi2.4500
O2···H11A2.4400H5···H32.5500
O2···H11Bv2.8500H5···O3vi2.6100
O3···H32.4300H7···O1iii2.7600
O3···H3vi2.4500H7···O2iii2.5200
O3···H5vi2.6100H7···C1iii3.0600
C1···C2v3.420 (4)H8···F1vii2.8400
C1···C10v3.431 (4)H11A···Br1v2.8900
C2···O2i3.411 (3)H11A···O22.4400
C2···O3v3.403 (3)H11A···C12.8800
C2···C1i3.420 (4)H11A···C11v3.1000
C3···O3vi3.296 (3)H11B···O22.5500
C4···C9i3.541 (3)H11B···O2i2.8500
C5···C8i3.574 (4)H11B···C12.9200
C1—O1—C9123.43 (19)C4—C9—C8122.1 (2)
O1—C1—O2116.5 (2)O3—C10—C2119.5 (2)
O1—C1—C2116.7 (2)O3—C10—C11121.4 (2)
O2—C1—C2126.9 (2)C2—C10—C11119.1 (2)
C1—C2—C3119.4 (2)Br1—C11—C10113.15 (18)
C1—C2—C10121.8 (2)C2—C3—H3119.00
C3—C2—C10118.8 (2)C4—C3—H3119.00
C2—C3—C4122.5 (2)C4—C5—H5121.00
C3—C4—C5123.9 (2)C6—C5—H5121.00
C3—C4—C9117.6 (2)C6—C7—H7120.00
C5—C4—C9118.4 (2)C8—C7—H7120.00
C4—C5—C6118.2 (2)C7—C8—H8120.00
F1—C6—C5118.8 (2)C9—C8—H8121.00
F1—C6—C7118.0 (3)Br1—C11—H11A109.00
C5—C6—C7123.2 (2)Br1—C11—H11B109.00
C6—C7—C8119.1 (3)C10—C11—H11A109.00
C7—C8—C9119.0 (3)C10—C11—H11B109.00
O1—C9—C4120.2 (2)H11A—C11—H11B108.00
O1—C9—C8117.7 (2)
C9—O1—C1—O2−176.2 (2)C3—C4—C5—C6−177.3 (3)
C9—O1—C1—C22.9 (3)C9—C4—C5—C60.7 (4)
C1—O1—C9—C42.0 (3)C3—C4—C9—O1−4.2 (3)
C1—O1—C9—C8−178.5 (2)C3—C4—C9—C8176.3 (2)
O1—C1—C2—C3−5.6 (4)C5—C4—C9—O1177.7 (2)
O1—C1—C2—C10174.2 (2)C5—C4—C9—C8−1.8 (4)
O2—C1—C2—C3173.4 (3)C4—C5—C6—F1−179.7 (2)
O2—C1—C2—C10−6.8 (4)C4—C5—C6—C70.6 (4)
C1—C2—C3—C43.6 (4)F1—C6—C7—C8179.5 (3)
C10—C2—C3—C4−176.3 (2)C5—C6—C7—C8−0.8 (4)
C1—C2—C10—O3−178.2 (2)C6—C7—C8—C9−0.4 (4)
C1—C2—C10—C110.2 (4)C7—C8—C9—O1−177.8 (2)
C3—C2—C10—O31.7 (4)C7—C8—C9—C41.7 (4)
C3—C2—C10—C11−179.9 (2)O3—C10—C11—Br1−3.2 (3)
C2—C3—C4—C5179.4 (3)C2—C10—C11—Br1178.48 (18)
C2—C3—C4—C91.4 (4)
D—H···AD—HH···AD···AD—H···A
C3—H3···O3vi0.932.453.296 (3)152
C7—H7···O2iii0.932.523.425 (3)164
C11—H11A···Br1v0.972.893.747 (3)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O3i0.932.453.296 (3)152
C7—H7⋯O2ii0.932.523.425 (3)164
C11—H11A⋯Br1iii0.972.893.747 (3)148

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  The mode of action of novobiocin.

Authors:  A Morris; A D Russell
Journal:  Prog Med Chem       Date:  1971

3.  Synthesis of new 7-substituted 4-methylcoumarin derivatives of antimicrobial activity.

Authors:  A I Eid; F A Ragab; S L el-Ansary; S M el-Gazayerly; F E Mourad
Journal:  Arch Pharm (Weinheim)       Date:  1994-04       Impact factor: 3.751

4.  Effects of novobiocin, coumermycin A1, clorobiocin, and their analogs on Escherichia coli DNA gyrase and bacterial growth.

Authors:  D C Hooper; J S Wolfson; G L McHugh; M B Winters; M N Swartz
Journal:  Antimicrob Agents Chemother       Date:  1982-10       Impact factor: 5.191

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.