Literature DB >> 22065017

3,3,4,4-Tetra-fluoro-1-[2-(3,3,4,4-tetra-fluoro-pyrrolidin-1-yl)phen-yl]pyrrolidine.

Jin Wang, Jun-Wen Zhong, Pei-Lian Liu, Wan-Wan Cao, Zhuo Zeng.   

Abstract

The asymmetric unit of the title compound, C(14)H(12)F(8)N(2), contains one tetra-fluoro-pyrrolidine system and one half-mol-ecule of benzene; the latter, together with a second heterocyclic unit, are completed by symmetry, with a twofold crystallographic axis crossing through both the middle of the bond between the C atoms bearing the heterocyclic rings and the opposite C-C bonds of the whole benzene mol-ecule. The pyrrolidine ring shows an envelope conformation with the apex at the N atom. The dihedral angle between the least-squares plane of this ring and the benzene ring is 36.9 (5)°. There are intra-molecular C-H⋯N inter-actions generating S(6) ring motifs. In the crystal structure, the mol-ecules are linked by C-H⋯F inter-actions, forming chains parallel to [010].

Entities:  

Year:  2011        PMID: 22065017      PMCID: PMC3200749          DOI: 10.1107/S1600536811033757

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the properties of fluorinated and alkyl-fluorinated heterocyclic compounds, see: Babudri et al. (2007 ▶). For applications of compounds with fluorinated rings, see: Brambilla (2001 ▶); Hagan (2008 ▶). For the synthesis of related compounds, see: Zeng & Shreeve (2009 ▶). For a description of hydrogen-bonding motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C14H12F8N2 M = 360.26 Orthorhombic, a = 8.678 (3) Å b = 9.818 (3) Å c = 17.088 (5) Å V = 1455.9 (8) Å3 Z = 4 Mo Kα radiation μ = 0.17 mm−1 T = 293 K 0.44 × 0.37 × 0.22 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.928, T max = 0.963 6762 measured reflections 1283 independent reflections 878 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.071 wR(F 2) = 0.129 S = 0.92 1283 reflections 109 parameters H-atom parameters constrained Δρmax = 0.50 e Å−3 Δρmin = −0.41 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033757/lr2025sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033757/lr2025Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12F8N2F(000) = 728
Mr = 360.26Dx = 1.644 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 1256 reflections
a = 8.678 (3) Åθ = 2.4–20.4°
b = 9.818 (3) ŵ = 0.17 mm1
c = 17.088 (5) ÅT = 293 K
V = 1455.9 (8) Å3Block, colourless
Z = 40.44 × 0.37 × 0.22 mm
Bruker SMART CCD area-detector diffractometer1283 independent reflections
Radiation source: fine-focus sealed tube878 reflections with I > 2σ(I)
graphiteRint = 0.036
φ and ω scansθmax = 25.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→10
Tmin = 0.928, Tmax = 0.963k = −10→11
6762 measured reflectionsl = −20→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.071Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.129H-atom parameters constrained
S = 0.92w = 1/[σ2(Fo2) + (0.005P)2 + 3.940P] where P = (Fo2 + 2Fc2)/3
1283 reflections(Δ/σ)max = 0.022
109 parametersΔρmax = 0.50 e Å3
0 restraintsΔρmin = −0.41 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
F1−0.1645 (4)−0.1228 (3)−0.4379 (2)0.1363 (14)
F20.0115 (4)−0.1911 (3)−0.51367 (13)0.1146 (11)
F30.0249 (6)−0.0376 (3)−0.34538 (19)0.181 (2)
F40.2023 (4)−0.0915 (4)−0.42295 (19)0.1626 (19)
N1−0.0183 (3)−0.3376 (3)−0.33165 (14)0.0491 (7)
C1−0.0181 (5)−0.7079 (3)−0.2889 (2)0.0673 (11)
H1−0.0338−0.7897−0.31510.081*
C2−0.0311 (4)−0.5864 (3)−0.3283 (2)0.0586 (10)
H2−0.0529−0.5872−0.38150.070*
C3−0.0126 (4)−0.4627 (3)−0.29036 (18)0.0472 (8)
C4−0.0670 (5)−0.3406 (4)−0.4133 (2)0.0697 (12)
H4A−0.1751−0.3646−0.41790.084*
H4B−0.0060−0.4047−0.44340.084*
C5−0.0388 (5)−0.1976 (4)−0.4393 (2)0.0663 (11)
C60.0846 (6)−0.1425 (4)−0.3851 (2)0.0743 (12)
C70.1226 (5)−0.2548 (4)−0.3301 (2)0.0636 (10)
H7A0.2110−0.3065−0.34810.076*
H7B0.1432−0.2204−0.27790.076*
U11U22U33U12U13U23
F10.089 (2)0.106 (2)0.214 (4)0.0321 (19)0.015 (2)0.049 (2)
F20.171 (3)0.124 (2)0.0491 (14)−0.027 (2)0.0102 (17)0.0096 (14)
F30.380 (7)0.0575 (16)0.106 (2)0.053 (3)−0.059 (3)−0.0167 (16)
F40.153 (3)0.208 (4)0.127 (3)−0.099 (3)−0.046 (2)0.102 (3)
N10.0642 (19)0.0434 (14)0.0395 (14)−0.0035 (14)−0.0065 (14)0.0017 (12)
C10.075 (3)0.0410 (18)0.086 (3)−0.005 (2)0.006 (2)−0.0105 (18)
C20.069 (3)0.0468 (19)0.060 (2)−0.0026 (18)−0.0019 (19)−0.0090 (17)
C30.052 (2)0.0416 (17)0.0478 (17)−0.0006 (16)−0.0009 (16)−0.0011 (14)
C40.097 (3)0.063 (2)0.049 (2)−0.005 (2)−0.020 (2)0.0015 (19)
C50.084 (3)0.069 (2)0.047 (2)0.009 (2)0.003 (2)0.0102 (18)
C60.107 (4)0.058 (2)0.058 (2)−0.016 (2)−0.002 (2)0.011 (2)
C70.078 (3)0.053 (2)0.060 (2)−0.012 (2)−0.009 (2)0.0106 (18)
F1—C51.315 (5)C2—C31.385 (4)
F2—C51.344 (4)C2—H20.9300
F3—C61.337 (5)C3—C3i1.397 (6)
F4—C61.309 (5)C4—C51.493 (5)
N1—C31.418 (4)C4—H4A0.9700
N1—C41.458 (4)C4—H4B0.9700
N1—C71.468 (5)C5—C61.516 (6)
C1—C1i1.364 (7)C6—C71.485 (5)
C1—C21.374 (5)C7—H7A0.9700
C1—H10.9300C7—H7B0.9700
C3—N1—C4117.9 (3)F1—C5—F2105.1 (3)
C3—N1—C7116.2 (3)F1—C5—C4112.5 (4)
C4—N1—C7105.7 (3)F2—C5—C4112.3 (3)
C1i—C1—C2119.7 (2)F1—C5—C6112.0 (4)
C1i—C1—H1120.1F2—C5—C6109.4 (4)
C2—C1—H1120.1C4—C5—C6105.6 (3)
C1—C2—C3121.5 (3)F4—C6—F3105.0 (4)
C1—C2—H2119.3F4—C6—C7115.0 (4)
C3—C2—H2119.3F3—C6—C7109.7 (3)
C2—C3—C3i118.7 (2)F4—C6—C5112.6 (3)
C2—C3—N1121.5 (3)F3—C6—C5108.2 (4)
C3i—C3—N1119.80 (16)C7—C6—C5106.2 (3)
N1—C4—C5102.6 (3)N1—C7—C6102.4 (3)
N1—C4—H4A111.2N1—C7—H7A111.3
C5—C4—H4A111.2C6—C7—H7A111.3
N1—C4—H4B111.2N1—C7—H7B111.3
C5—C4—H4B111.2C6—C7—H7B111.3
H4A—C4—H4B109.2H7A—C7—H7B109.2
C1i—C1—C2—C3−1.8 (8)F2—C5—C6—F45.7 (5)
C1—C2—C3—C3i−3.0 (7)C4—C5—C6—F4126.7 (4)
C1—C2—C3—N1176.7 (4)F1—C5—C6—F35.1 (5)
C4—N1—C3—C29.0 (5)F2—C5—C6—F3121.2 (4)
C7—N1—C3—C2−118.0 (4)C4—C5—C6—F3−117.7 (4)
C4—N1—C3—C3i−171.2 (4)F1—C5—C6—C7122.8 (4)
C7—N1—C3—C3i61.8 (5)F2—C5—C6—C7−121.1 (4)
C3—N1—C4—C5−172.8 (3)C4—C5—C6—C70.0 (5)
C7—N1—C4—C5−40.9 (4)C3—N1—C7—C6173.7 (3)
N1—C4—C5—F1−98.1 (4)C4—N1—C7—C640.8 (4)
N1—C4—C5—F2143.5 (4)F4—C6—C7—N1−149.4 (4)
N1—C4—C5—C624.4 (4)F3—C6—C7—N192.5 (4)
F1—C5—C6—F4−110.5 (5)C5—C6—C7—N1−24.1 (4)
D—H···AD—HH···AD···AD—H···A
C1—H1···F3ii0.932.543.398 (4)154.
C7—H7B···N1i0.972.453.020 (4)117.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯F3i0.932.543.398 (4)154
C7—H7B⋯N1ii0.972.453.020 (4)117

Symmetry codes: (i) ; (ii) .

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