| Literature DB >> 22064793 |
Ping Xia, Jian-Li Lin, Sheng-Liang Ni.
Abstract
The asymmetric unit of the title compound, [Ni(HCO(2))(2)(C(14)H(12)N(2))(H(2)O)]·H(2)O, contains a mononuclear complex mol-ecule hydrogen bonded to a lattice water mol-ecule. The Ni(II) atom exhibits a distorted octa-hedral coordination geometry formed by the N atoms from a 2,9-dimethyl-1,10-phenanthroline ligand, two O atoms of a chelating formate anion, one aqua O atom and one O atom of a coordinating formate anion. The mol-ecules are assembled into chains extending along [100] through by O-H⋯O hydrogen bonds. The supra-molecular chains are further linked into layers parallel to (011) by weak π-π packing inter-actions [centroid-centroid separation = 3.768 (2) Å]. The resulting layers are stacked to meet the requirement of close-packing patterns.Entities:
Year: 2011 PMID: 22064793 PMCID: PMC3200966 DOI: 10.1107/S1600536811030558
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(HCO2)2(C14H12N2)(H2O)]·H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 25 reflections | |
| θ = 3.1–27.4° | |
| µ = 1.19 mm−1 | |
| α = 82.42 (3)° | |
| β = 81.77 (3)° | Block, green |
| γ = 76.10 (3)° | 0.30 × 0.20 × 0.15 mm |
| Rigaku R-AXIS RAPID diffractometer | 3785 independent reflections |
| Radiation source: fine-focus sealed tube | 3214 reflections with |
| graphite | |
| ω scans | θmax = 27.4°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 8265 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 3785 reflections | Δρmax = 0.69 e Å−3 |
| 226 parameters | Δρmin = −0.67 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0015 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ni | 0.77473 (5) | 0.18268 (4) | 0.77154 (3) | 0.02776 (13) | |
| O1 | 0.8178 (4) | −0.0310 (2) | 0.7920 (3) | 0.0540 (7) | |
| O2 | 0.7827 (4) | 0.0786 (3) | 0.9468 (2) | 0.0494 (6) | |
| C1 | 0.8093 (6) | −0.0283 (4) | 0.9011 (4) | 0.0535 (10) | |
| H1A | 0.8232 | −0.1082 | 0.9500 | 0.064* | |
| O3 | 0.4915 (3) | 0.1977 (2) | 0.7917 (2) | 0.0395 (5) | |
| O4 | 0.2105 (3) | 0.3030 (3) | 0.8671 (2) | 0.0485 (6) | |
| C2 | 0.3833 (5) | 0.2772 (4) | 0.8554 (3) | 0.0418 (8) | |
| H2A | 0.4386 | 0.3228 | 0.8997 | 0.050* | |
| O5 | 1.0628 (3) | 0.1559 (2) | 0.7442 (2) | 0.0378 (5) | |
| H52 | 1.1256 | 0.0773 | 0.7581 | 0.045* | |
| H51 | 1.1024 | 0.2025 | 0.7876 | 0.045* | |
| O6 | 0.6484 (4) | 0.0613 (3) | 0.1914 (2) | 0.0544 (7) | |
| H61 | 0.6881 | 0.0662 | 0.1176 | 0.065* | |
| H62 | 0.5887 | 0.0096 | 0.2356 | 0.065* | |
| N1 | 0.7660 (3) | 0.3828 (2) | 0.7853 (2) | 0.0271 (5) | |
| N2 | 0.7565 (4) | 0.2549 (3) | 0.5945 (2) | 0.0296 (5) | |
| C3 | 0.7791 (6) | 0.3669 (4) | 0.9991 (3) | 0.0460 (9) | |
| H3A | 0.7739 | 0.2766 | 0.9924 | 0.069* | |
| H3B | 0.6727 | 0.4074 | 1.0509 | 0.069* | |
| H3C | 0.8922 | 0.3672 | 1.0310 | 0.069* | |
| C4 | 0.7770 (4) | 0.4441 (3) | 0.8789 (3) | 0.0334 (7) | |
| C5 | 0.7852 (5) | 0.5793 (4) | 0.8660 (4) | 0.0456 (9) | |
| H5A | 0.7951 | 0.6194 | 0.9321 | 0.055* | |
| C6 | 0.7789 (6) | 0.6518 (4) | 0.7588 (4) | 0.0493 (9) | |
| H6A | 0.7825 | 0.7415 | 0.7516 | 0.059* | |
| C7 | 0.7668 (5) | 0.5908 (3) | 0.6584 (3) | 0.0393 (7) | |
| C8 | 0.7604 (6) | 0.6596 (4) | 0.5418 (4) | 0.0530 (10) | |
| H8A | 0.7629 | 0.7496 | 0.5305 | 0.064* | |
| C9 | 0.7509 (6) | 0.5968 (4) | 0.4485 (4) | 0.0527 (10) | |
| H9A | 0.7458 | 0.6441 | 0.3736 | 0.063* | |
| C10 | 0.7485 (5) | 0.4584 (4) | 0.4624 (3) | 0.0412 (8) | |
| C11 | 0.7418 (6) | 0.3871 (5) | 0.3671 (3) | 0.0530 (10) | |
| H11A | 0.7382 | 0.4300 | 0.2906 | 0.064* | |
| C12 | 0.7406 (6) | 0.2557 (5) | 0.3877 (3) | 0.0530 (10) | |
| H12A | 0.7360 | 0.2085 | 0.3249 | 0.064* | |
| C13 | 0.7465 (5) | 0.1901 (4) | 0.5032 (3) | 0.0392 (7) | |
| C14 | 0.7372 (7) | 0.0465 (4) | 0.5273 (4) | 0.0602 (11) | |
| H14A | 0.7439 | 0.0183 | 0.6102 | 0.090* | |
| H14B | 0.8404 | −0.0066 | 0.4815 | 0.090* | |
| H14C | 0.6214 | 0.0358 | 0.5057 | 0.090* | |
| C15 | 0.7550 (4) | 0.3872 (3) | 0.5750 (3) | 0.0306 (6) | |
| C16 | 0.7622 (4) | 0.4551 (3) | 0.6761 (3) | 0.0301 (6) |
| Ni | 0.0320 (2) | 0.0254 (2) | 0.0280 (2) | −0.01022 (15) | −0.00438 (15) | −0.00207 (14) |
| O1 | 0.078 (2) | 0.0316 (13) | 0.0548 (17) | −0.0161 (13) | −0.0093 (14) | −0.0044 (11) |
| O2 | 0.0675 (18) | 0.0447 (15) | 0.0364 (13) | −0.0178 (13) | −0.0080 (12) | 0.0058 (11) |
| C1 | 0.070 (3) | 0.0368 (19) | 0.052 (2) | −0.0164 (18) | −0.0105 (19) | 0.0139 (17) |
| O3 | 0.0273 (11) | 0.0512 (14) | 0.0448 (13) | −0.0162 (10) | −0.0022 (10) | −0.0107 (11) |
| O4 | 0.0317 (13) | 0.0651 (17) | 0.0524 (15) | −0.0129 (12) | −0.0027 (11) | −0.0177 (13) |
| C2 | 0.0361 (18) | 0.056 (2) | 0.0394 (18) | −0.0179 (16) | −0.0018 (14) | −0.0144 (16) |
| O5 | 0.0293 (11) | 0.0398 (12) | 0.0462 (13) | −0.0070 (9) | −0.0104 (10) | −0.0054 (10) |
| O6 | 0.0642 (18) | 0.0550 (16) | 0.0460 (15) | −0.0148 (14) | −0.0076 (13) | −0.0080 (12) |
| N1 | 0.0247 (12) | 0.0272 (12) | 0.0303 (12) | −0.0059 (10) | −0.0023 (9) | −0.0072 (9) |
| N2 | 0.0316 (13) | 0.0338 (13) | 0.0248 (12) | −0.0104 (11) | −0.0033 (10) | −0.0028 (10) |
| C3 | 0.052 (2) | 0.061 (2) | 0.0322 (17) | −0.0201 (18) | −0.0079 (15) | −0.0130 (16) |
| C4 | 0.0290 (15) | 0.0397 (17) | 0.0350 (16) | −0.0114 (13) | 0.0011 (12) | −0.0147 (13) |
| C5 | 0.045 (2) | 0.045 (2) | 0.054 (2) | −0.0166 (16) | 0.0011 (16) | −0.0251 (17) |
| C6 | 0.054 (2) | 0.0294 (17) | 0.067 (3) | −0.0139 (16) | 0.0035 (19) | −0.0152 (16) |
| C7 | 0.0356 (17) | 0.0284 (16) | 0.053 (2) | −0.0085 (13) | −0.0034 (15) | −0.0005 (14) |
| C8 | 0.057 (2) | 0.0317 (18) | 0.066 (3) | −0.0117 (17) | −0.005 (2) | 0.0130 (17) |
| C9 | 0.056 (2) | 0.052 (2) | 0.045 (2) | −0.0155 (19) | −0.0094 (18) | 0.0235 (18) |
| C10 | 0.0361 (18) | 0.050 (2) | 0.0353 (17) | −0.0103 (15) | −0.0067 (14) | 0.0071 (15) |
| C11 | 0.057 (2) | 0.075 (3) | 0.0253 (17) | −0.014 (2) | −0.0086 (16) | 0.0037 (17) |
| C12 | 0.062 (3) | 0.074 (3) | 0.0280 (17) | −0.021 (2) | −0.0083 (16) | −0.0125 (17) |
| C13 | 0.0382 (18) | 0.0484 (19) | 0.0346 (17) | −0.0101 (15) | −0.0039 (13) | −0.0165 (14) |
| C14 | 0.085 (3) | 0.057 (2) | 0.052 (2) | −0.030 (2) | −0.009 (2) | −0.0245 (19) |
| C15 | 0.0275 (15) | 0.0337 (15) | 0.0304 (15) | −0.0087 (12) | −0.0043 (12) | 0.0016 (12) |
| C16 | 0.0304 (15) | 0.0274 (14) | 0.0335 (15) | −0.0106 (12) | −0.0021 (12) | −0.0006 (11) |
| Ni—O3 | 2.046 (2) | C3—H3C | 0.9600 |
| Ni—O5 | 2.066 (2) | C4—C5 | 1.405 (5) |
| Ni—N2 | 2.076 (2) | C5—C6 | 1.352 (6) |
| Ni—N1 | 2.087 (2) | C5—H5A | 0.9300 |
| Ni—O1 | 2.148 (3) | C6—C7 | 1.406 (5) |
| Ni—O2 | 2.150 (2) | C6—H6A | 0.9300 |
| Ni—C1 | 2.457 (4) | C7—C16 | 1.403 (4) |
| O1—C1 | 1.244 (5) | C7—C8 | 1.429 (5) |
| O2—C1 | 1.249 (5) | C8—C9 | 1.341 (6) |
| C1—H1A | 0.9300 | C8—H8A | 0.9300 |
| O3—C2 | 1.235 (4) | C9—C10 | 1.428 (5) |
| O4—C2 | 1.233 (4) | C9—H9A | 0.9300 |
| C2—H2A | 0.9300 | C10—C15 | 1.399 (4) |
| O5—H52 | 0.8426 | C10—C11 | 1.408 (5) |
| O5—H51 | 0.8597 | C11—C12 | 1.354 (6) |
| O6—H61 | 0.8524 | C11—H11A | 0.9300 |
| O6—H62 | 0.8469 | C12—C13 | 1.406 (5) |
| N1—C4 | 1.337 (4) | C12—H12A | 0.9300 |
| N1—C16 | 1.370 (4) | C13—C14 | 1.495 (5) |
| N2—C13 | 1.334 (4) | C14—H14A | 0.9600 |
| N2—C15 | 1.359 (4) | C14—H14B | 0.9600 |
| C3—C4 | 1.497 (5) | C14—H14C | 0.9600 |
| C3—H3A | 0.9600 | C15—C16 | 1.444 (4) |
| C3—H3B | 0.9600 | ||
| O3—Ni—O5 | 175.85 (9) | C4—C3—H3C | 109.5 |
| O3—Ni—N2 | 88.19 (10) | H3A—C3—H3C | 109.5 |
| O5—Ni—N2 | 90.52 (10) | H3B—C3—H3C | 109.5 |
| O3—Ni—N1 | 97.19 (10) | N1—C4—C5 | 121.0 (3) |
| O5—Ni—N1 | 86.51 (10) | N1—C4—C3 | 119.0 (3) |
| N2—Ni—N1 | 81.48 (10) | C5—C4—C3 | 119.9 (3) |
| O3—Ni—O1 | 89.42 (11) | C6—C5—C4 | 121.0 (3) |
| O5—Ni—O1 | 87.32 (11) | C6—C5—H5A | 119.5 |
| N2—Ni—O1 | 110.07 (11) | C4—C5—H5A | 119.5 |
| N1—Ni—O1 | 166.96 (10) | C5—C6—C7 | 119.6 (3) |
| O3—Ni—O2 | 88.37 (11) | C5—C6—H6A | 120.2 |
| O5—Ni—O2 | 92.29 (11) | C7—C6—H6A | 120.2 |
| N2—Ni—O2 | 170.43 (10) | C16—C7—C6 | 117.0 (3) |
| N1—Ni—O2 | 107.82 (10) | C16—C7—C8 | 119.6 (3) |
| O1—Ni—O2 | 60.97 (11) | C6—C7—C8 | 123.4 (3) |
| O3—Ni—C1 | 88.83 (13) | C9—C8—C7 | 121.2 (3) |
| O5—Ni—C1 | 89.66 (13) | C9—C8—H8A | 119.4 |
| N2—Ni—C1 | 140.41 (13) | C7—C8—H8A | 119.4 |
| N1—Ni—C1 | 138.01 (12) | C8—C9—C10 | 120.9 (3) |
| O1—Ni—C1 | 30.42 (12) | C8—C9—H9A | 119.6 |
| O2—Ni—C1 | 30.54 (12) | C10—C9—H9A | 119.6 |
| C1—O1—Ni | 88.6 (2) | C15—C10—C11 | 117.1 (3) |
| C1—O2—Ni | 88.4 (2) | C15—C10—C9 | 119.7 (3) |
| O1—C1—O2 | 122.0 (3) | C11—C10—C9 | 123.2 (3) |
| O1—C1—Ni | 60.93 (19) | C12—C11—C10 | 119.6 (3) |
| O2—C1—Ni | 61.03 (18) | C12—C11—H11A | 120.2 |
| O1—C1—H1A | 119.0 | C10—C11—H11A | 120.2 |
| O2—C1—H1A | 119.0 | C11—C12—C13 | 120.5 (3) |
| Ni—C1—H1A | 179.7 | C11—C12—H12A | 119.8 |
| C2—O3—Ni | 121.6 (2) | C13—C12—H12A | 119.8 |
| O4—C2—O3 | 127.6 (3) | N2—C13—C12 | 121.0 (3) |
| O4—C2—H2A | 116.2 | N2—C13—C14 | 118.2 (3) |
| O3—C2—H2A | 116.2 | C12—C13—C14 | 120.8 (3) |
| Ni—O5—H52 | 116.4 | C13—C14—H14A | 109.5 |
| Ni—O5—H51 | 111.9 | C13—C14—H14B | 109.5 |
| H52—O5—H51 | 104.9 | H14A—C14—H14B | 109.5 |
| H61—O6—H62 | 132.8 | C13—C14—H14C | 109.5 |
| C4—N1—C16 | 118.4 (3) | H14A—C14—H14C | 109.5 |
| C4—N1—Ni | 130.5 (2) | H14B—C14—H14C | 109.5 |
| C16—N1—Ni | 110.88 (19) | N2—C15—C10 | 122.9 (3) |
| C13—N2—C15 | 118.9 (3) | N2—C15—C16 | 117.6 (3) |
| C13—N2—Ni | 129.2 (2) | C10—C15—C16 | 119.5 (3) |
| C15—N2—Ni | 111.95 (19) | N1—C16—C7 | 123.0 (3) |
| C4—C3—H3A | 109.5 | N1—C16—C15 | 118.0 (3) |
| C4—C3—H3B | 109.5 | C7—C16—C15 | 119.0 (3) |
| H3A—C3—H3B | 109.5 |
| H··· | ||||
| O5—H51···O4i | 0.86 | 1.85 | 2.703 (3) | 173.3 |
| O5—H52···O6ii | 0.84 | 2.03 | 2.808 (4) | 154.2 |
| O6—H61···O2iii | 0.85 | 1.98 | 2.830 (4) | 179.3 |
| O6—H62···O3iv | 0.85 | 2.43 | 3.077 (4) | 133.4 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H51⋯O4i | 0.86 | 1.85 | 2.703 (3) | 173.3 |
| O5—H52⋯O6ii | 0.84 | 2.03 | 2.808 (4) | 154.2 |
| O6—H61⋯O2iii | 0.85 | 1.98 | 2.830 (4) | 179.3 |
| O6—H62⋯O3iv | 0.85 | 2.43 | 3.077 (4) | 133.4 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .