Literature DB >> 22064645

Dimethyl 4-(4-hy-droxy-phen-yl)-2,6-dimethyl-1,4-dihydro-pyridine-3,5-dicarboxyl-ate.

Chun-Hua Zhang, Jing-Min Zhao, Bao-Guo Chen.   

Abstract

The title mol-ecule, C(17)H(19)NO(5), was prepared by a Hantzsch dihydro-pyridine synthesis from 4-hy-droxy-benzaldehyde, methyl acetoacetate and NH(4)HCO(3). In the mol-ecular structure of the title compound, the dihydro-pyridine ring adopts a flattened boat conformation and the plane of the base of the boat forms a dihedral angle of 80.8 (2)° with the aromatic six-membered ring. The packing is stabilized by strong inter-molecular N-H⋯O(carbon-yl), O(hydrox-y)-H⋯O(carbon-yl) and weak intra-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 22064645      PMCID: PMC3200733          DOI: 10.1107/S1600536811032521

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the bioactivity and synthesis of 1,4-dihydro­pyridines, see: Yang et al. (2010 ▶); Davies et al. (2005 ▶); Warrior et al. (2005 ▶); Ko & Yao (2006 ▶); Rose & Draeger (1992 ▶). For related structures, see: Bai et al. (2009 ▶); Fun et al. (2009 ▶); Thenmozhi et al. (2009 ▶). For hydrogen-bond definitions, see: Desiraju & Steiner (1999 ▶). For the synthetic method, see: Tamaddon et al. (2010 ▶).

Experimental

Crystal data

C17H19NO5 M = 317.33 Monoclinic, a = 13.245 (3) Å b = 9.3480 (19) Å c = 13.754 (3) Å β = 110.14 (3)° V = 1598.8 (6) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Nonius CAD-4 diffractometer Absorption correction: ψ scan For semi-empirical (using intensity measurements) absorption, see: North et al. (1968 ▶) T min = 0.981, T max = 0.990 4588 measured reflections 2931 independent reflections 1212 reflections with I > 2σ(I) R int = 0.104 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.074 wR(F 2) = 0.081 S = 1.00 2931 reflections 209 parameters 1 restraint H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1996 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811032521/zl2397sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811032521/zl2397Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811032521/zl2397Isup3.mol Supplementary material file. DOI: 10.1107/S1600536811032521/zl2397Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H19NO5F(000) = 672
Mr = 317.33Dx = 1.318 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 13.245 (3) Åθ = 9–12°
b = 9.3480 (19) ŵ = 0.10 mm1
c = 13.754 (3) ÅT = 293 K
β = 110.14 (3)°Block, yellow
V = 1598.8 (6) Å30.20 × 0.10 × 0.10 mm
Z = 4
Nonius CAD 4 diffractometer1212 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.104
graphiteθmax = 25.4°, θmin = 1.8°
ω/2θ scansh = 0→15
Absorption correction: ψ scan For semi-empirical (using intensity measurements) absorption, see: North et al. (1968)k = −4→11
Tmin = 0.981, Tmax = 0.990l = −16→15
4588 measured reflections3 standard reflections every 200 reflections
2931 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.074Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.005P)2] where P = (Fo2 + 2Fc2)/3
2931 reflections(Δ/σ)max < 0.001
209 parametersΔρmax = 0.16 e Å3
1 restraintΔρmin = −0.17 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.6521 (3)0.2025 (3)0.3016 (2)0.0547 (9)
H1A0.65150.14450.25290.066*
O11.0141 (2)−0.0866 (3)0.7601 (2)0.0705 (9)
H1B0.9967−0.11570.80830.106*
C10.8797 (3)0.1492 (4)0.5474 (3)0.0460 (10)
H1C0.89100.17930.48750.055*
O20.5444 (2)0.3203 (4)0.5778 (2)0.0866 (11)
C20.9528 (3)0.0542 (4)0.6113 (3)0.0609 (12)
H2A1.01160.02320.59470.073*
O30.4353 (2)0.1763 (3)0.4605 (2)0.0698 (9)
C30.9371 (3)0.0055 (4)0.7006 (3)0.0498 (10)
O40.8684 (2)0.5538 (3)0.3923 (2)0.0706 (9)
C40.8511 (3)0.0495 (4)0.7228 (3)0.0601 (12)
H4A0.83960.01570.78160.072*
O50.8363 (2)0.5462 (3)0.5423 (2)0.0600 (8)
C50.7786 (3)0.1468 (4)0.6570 (3)0.0578 (12)
H5A0.71950.17630.67350.069*
C60.7922 (3)0.2018 (4)0.5662 (3)0.0422 (9)
C70.7113 (3)0.3079 (4)0.4988 (3)0.0466 (9)
H7A0.70360.38530.54380.056*
C80.5986 (3)0.2431 (4)0.4446 (3)0.0480 (10)
C90.5808 (3)0.1810 (4)0.3502 (3)0.0442 (9)
C100.7253 (3)0.3108 (4)0.3254 (3)0.0461 (10)
C110.7525 (3)0.3737 (4)0.4184 (3)0.0530 (11)
C120.4874 (3)0.0857 (4)0.2903 (3)0.0674 (14)
H12A0.43840.07740.32760.101*
H12B0.5139−0.00730.28190.101*
H12C0.45080.12690.22340.101*
C130.7703 (3)0.3459 (5)0.2409 (3)0.0789 (16)
H13A0.84260.38070.27150.118*
H13B0.72660.41800.19620.118*
H13C0.77030.26130.20130.118*
C140.5229 (3)0.2511 (4)0.4999 (3)0.0518 (11)
C150.3573 (3)0.1894 (5)0.5099 (3)0.1006 (19)
H15A0.29570.13190.47400.151*
H15B0.33590.28770.50880.151*
H15C0.38780.15750.58040.151*
C160.8259 (3)0.4957 (4)0.4461 (3)0.0506 (10)
C170.9061 (3)0.6675 (4)0.5735 (3)0.0797 (15)
H17A0.91230.69480.64260.120*
H17B0.87700.74570.52710.120*
H17C0.97590.64330.57170.120*
U11U22U33U12U13U23
N10.077 (3)0.042 (2)0.048 (2)0.0006 (19)0.0258 (18)0.0007 (17)
O10.074 (2)0.085 (2)0.0554 (19)0.0210 (18)0.0265 (16)0.0311 (17)
C10.060 (3)0.049 (3)0.036 (2)0.010 (2)0.0251 (19)−0.0016 (17)
O20.075 (2)0.127 (3)0.059 (2)−0.018 (2)0.0253 (17)−0.038 (2)
C20.058 (3)0.073 (3)0.057 (3)0.004 (2)0.027 (2)0.024 (2)
O30.0503 (18)0.104 (3)0.063 (2)−0.0190 (18)0.0301 (16)−0.0103 (19)
C30.056 (3)0.053 (2)0.045 (2)−0.006 (2)0.024 (2)0.001 (2)
O40.085 (2)0.075 (2)0.0512 (19)−0.0162 (18)0.0227 (16)0.0111 (16)
C40.066 (3)0.075 (3)0.045 (3)0.003 (3)0.026 (2)0.014 (2)
O50.087 (2)0.0338 (16)0.071 (2)−0.0074 (15)0.0426 (18)−0.0083 (15)
C50.052 (3)0.075 (3)0.054 (3)0.011 (2)0.029 (2)0.007 (2)
C60.048 (2)0.042 (2)0.041 (2)−0.0051 (18)0.0206 (19)0.0032 (17)
C70.054 (3)0.049 (2)0.039 (2)0.012 (2)0.0183 (19)−0.0042 (19)
C80.065 (3)0.042 (2)0.036 (2)0.0020 (19)0.015 (2)−0.0039 (17)
C90.042 (2)0.045 (2)0.047 (2)0.0111 (19)0.0175 (18)0.007 (2)
C100.058 (3)0.046 (2)0.046 (2)0.000 (2)0.032 (2)0.0108 (19)
C110.077 (3)0.043 (2)0.037 (2)0.014 (2)0.019 (2)−0.0060 (19)
C120.064 (3)0.097 (4)0.040 (2)−0.004 (3)0.016 (2)−0.021 (3)
C130.086 (4)0.103 (4)0.054 (3)−0.005 (3)0.032 (3)−0.003 (3)
C140.051 (3)0.059 (3)0.040 (2)0.002 (2)0.009 (2)−0.002 (2)
C150.055 (3)0.136 (5)0.112 (4)0.008 (4)0.031 (3)−0.018 (4)
C160.059 (3)0.049 (3)0.053 (3)0.002 (2)0.031 (2)0.016 (2)
C170.096 (4)0.052 (3)0.075 (3)−0.008 (3)0.009 (3)0.000 (3)
N1—C91.346 (4)C7—C111.522 (4)
N1—C101.361 (4)C7—C81.544 (5)
N1—H1A0.8600C7—H7A0.9800
O1—C31.370 (4)C8—C91.367 (4)
O1—H1B0.8200C8—C141.455 (5)
C1—C61.363 (4)C9—C121.517 (4)
C1—C21.383 (4)C10—C111.340 (5)
C1—H1C0.9300C10—C131.514 (4)
O2—C141.199 (4)C11—C161.461 (5)
C2—C31.391 (4)C12—H12A0.9600
C2—H2A0.9300C12—H12B0.9600
O3—C141.302 (4)C12—H12C0.9600
O3—C151.424 (4)C13—H13A0.9600
C3—C41.341 (4)C13—H13B0.9600
O4—C161.203 (4)C13—H13C0.9600
C4—C51.403 (5)C15—H15A0.9600
C4—H4A0.9300C15—H15B0.9600
O5—C161.366 (4)C15—H15C0.9600
O5—C171.433 (4)C17—H17A0.9600
C5—C61.417 (4)C17—H17B0.9600
C5—H5A0.9300C17—H17C0.9600
C6—C71.520 (5)
C9—N1—C10123.7 (3)C11—C10—N1119.4 (3)
C9—N1—H1A118.2C11—C10—C13126.2 (4)
C10—N1—H1A118.2N1—C10—C13114.4 (4)
C3—O1—H1B109.5C10—C11—C16121.8 (4)
C6—C1—C2124.5 (3)C10—C11—C7118.1 (4)
C6—C1—H1C117.8C16—C11—C7119.9 (3)
C2—C1—H1C117.8C9—C12—H12A109.5
C1—C2—C3119.1 (4)C9—C12—H12B109.5
C1—C2—H2A120.5H12A—C12—H12B109.5
C3—C2—H2A120.5C9—C12—H12C109.5
C14—O3—C15116.3 (3)H12A—C12—H12C109.5
C4—C3—O1124.9 (4)H12B—C12—H12C109.5
C4—C3—C2119.8 (4)C10—C13—H13A109.5
O1—C3—C2115.2 (3)C10—C13—H13B109.5
C3—C4—C5119.9 (4)H13A—C13—H13B109.5
C3—C4—H4A120.1C10—C13—H13C109.5
C5—C4—H4A120.1H13A—C13—H13C109.5
C16—O5—C17113.8 (3)H13B—C13—H13C109.5
C4—C5—C6122.4 (4)O2—C14—O3124.5 (4)
C4—C5—H5A118.8O2—C14—C8120.0 (4)
C6—C5—H5A118.8O3—C14—C8115.5 (4)
C1—C6—C5114.3 (4)O3—C15—H15A109.5
C1—C6—C7126.0 (3)O3—C15—H15B109.5
C5—C6—C7119.8 (3)H15A—C15—H15B109.5
C6—C7—C11110.6 (3)O3—C15—H15C109.5
C6—C7—C8113.6 (3)H15A—C15—H15C109.5
C11—C7—C8109.7 (3)H15B—C15—H15C109.5
C6—C7—H7A107.6O4—C16—O5121.8 (4)
C11—C7—H7A107.6O4—C16—C11127.0 (4)
C8—C7—H7A107.6O5—C16—C11111.0 (3)
C9—C8—C14126.5 (4)O5—C17—H17A109.5
C9—C8—C7116.5 (3)O5—C17—H17B109.5
C14—C8—C7117.0 (3)H17A—C17—H17B109.5
N1—C9—C8119.2 (4)O5—C17—H17C109.5
N1—C9—C12113.5 (3)H17A—C17—H17C109.5
C8—C9—C12127.3 (3)H17B—C17—H17C109.5
C6—C1—C2—C31.0 (7)C7—C8—C9—C12167.3 (4)
C1—C2—C3—C40.9 (7)C9—N1—C10—C1121.1 (6)
C1—C2—C3—O1−179.1 (4)C9—N1—C10—C13−160.3 (3)
O1—C3—C4—C5178.6 (4)N1—C10—C11—C16−176.5 (3)
C2—C3—C4—C5−1.3 (7)C13—C10—C11—C165.0 (7)
C3—C4—C5—C60.0 (7)N1—C10—C11—C77.9 (6)
C2—C1—C6—C5−2.1 (6)C13—C10—C11—C7−170.6 (4)
C2—C1—C6—C7179.0 (4)C6—C7—C11—C1092.2 (4)
C4—C5—C6—C11.6 (6)C8—C7—C11—C10−33.9 (5)
C4—C5—C6—C7−179.4 (4)C6—C7—C11—C16−83.5 (4)
C1—C6—C7—C11−12.1 (5)C8—C7—C11—C16150.4 (3)
C5—C6—C7—C11169.1 (3)C15—O3—C14—O25.5 (7)
C1—C6—C7—C8111.8 (4)C15—O3—C14—C8−176.4 (4)
C5—C6—C7—C8−67.0 (4)C9—C8—C14—O2−172.9 (4)
C6—C7—C8—C9−88.5 (4)C7—C8—C14—O28.7 (6)
C11—C7—C8—C935.9 (5)C9—C8—C14—O38.9 (6)
C6—C7—C8—C1490.1 (4)C7—C8—C14—O3−169.5 (4)
C11—C7—C8—C14−145.5 (3)C17—O5—C16—O4−3.2 (6)
C10—N1—C9—C8−18.3 (6)C17—O5—C16—C11−179.1 (3)
C10—N1—C9—C12162.1 (4)C10—C11—C16—O40.8 (7)
C14—C8—C9—N1169.3 (4)C7—C11—C16—O4176.3 (4)
C7—C8—C9—N1−12.3 (5)C10—C11—C16—O5176.4 (4)
C14—C8—C9—C12−11.2 (7)C7—C11—C16—O5−8.0 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O4i0.862.102.936 (4)164
O1—H1B···O2ii0.821.922.742 (4)179
C7—H7A···O20.982.392.781 (5)103
C7—H7A···O50.982.322.717 (5)103
C12—H12A···O30.962.062.790 (5)131
C13—H13A···O40.962.262.818 (5)116
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O4i0.862.102.936 (4)164
O1—H1B⋯O2ii0.821.922.742 (4)179
C7—H7A⋯O20.982.392.781 (5)103
C7—H7A⋯O50.982.322.717 (5)103
C12—H12A⋯O30.962.062.790 (5)131
C13—H13A⋯O40.962.262.818 (5)116

Symmetry codes: (i) ; (ii) .

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