Literature DB >> 22064560

Extreme genome reduction in symbiotic bacteria.

John P McCutcheon1, Nancy A Moran.   

Abstract

Since 2006, numerous cases of bacterial symbionts with extraordinarily small genomes have been reported. These organisms represent independent lineages from diverse bacterial groups. They have diminutive gene sets that rival some mitochondria and chloroplasts in terms of gene numbers and lack genes that are considered to be essential in other bacteria. These symbionts have numerous features in common, such as extraordinarily fast protein evolution and a high abundance of chaperones. Together, these features point to highly degenerate genomes that retain only the most essential functions, often including a considerable fraction of genes that serve the hosts. These discoveries have implications for the concept of minimal genomes, the origins of cellular organelles, and studies of symbiosis and host-associated microbiota.

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Year:  2011        PMID: 22064560     DOI: 10.1038/nrmicro2670

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  112 in total

1.  Evolutionary genomics: is Buchnera a bacterium or an organelle?

Authors:  J O Andersson
Journal:  Curr Biol       Date:  2000-11-30       Impact factor: 10.834

2.  Mealybug beta-proteobacterial endosymbionts contain gamma-proteobacterial symbionts.

Authors:  C D von Dohlen; S Kohler; S T Alsop; W R McManus
Journal:  Nature       Date:  2001-07-26       Impact factor: 49.962

3.  The 1.2-megabase genome sequence of Mimivirus.

Authors:  Didier Raoult; Stéphane Audic; Catherine Robert; Chantal Abergel; Patricia Renesto; Hiroyuki Ogata; Bernard La Scola; Marie Suzan; Jean-Michel Claverie
Journal:  Science       Date:  2004-10-14       Impact factor: 47.728

4.  The difference between organelles and endosymbionts.

Authors:  Ursula Theissen; William Martin
Journal:  Curr Biol       Date:  2006-12-19       Impact factor: 10.834

5.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

6.  Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host.

Authors:  Hidehiro Toh; Brian L Weiss; Sarah A H Perkin; Atsushi Yamashita; Kenshiro Oshima; Masahira Hattori; Serap Aksoy
Journal:  Genome Res       Date:  2005-12-19       Impact factor: 9.043

7.  Genome size and evolution.

Authors:  D C Wallace; H J Morowitz
Journal:  Chromosoma       Date:  1973       Impact factor: 4.316

8.  The major protein in the midgut of teneral Glossina morsitans morsitans is a molecular chaperone from the endosymbiotic bacterium Wigglesworthia glossinidia.

Authors:  L R Haines; J D Haddow; S Aksoy; R H Gooding; T W Pearson
Journal:  Insect Biochem Mol Biol       Date:  2002-11       Impact factor: 4.714

9.  Coexistence of Wolbachia with Buchnera aphidicola and a secondary symbiont in the aphid Cinara cedri.

Authors:  Laura Gómez-Valero; Mario Soriano-Navarro; Vicente Pérez-Brocal; Abdelaziz Heddi; Andrés Moya; José Manuel García-Verdugo; Amparo Latorre
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

10.  Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters.

Authors:  Dongying Wu; Sean C Daugherty; Susan E Van Aken; Grace H Pai; Kisha L Watkins; Hoda Khouri; Luke J Tallon; Jennifer M Zaborsky; Helen E Dunbar; Phat L Tran; Nancy A Moran; Jonathan A Eisen
Journal:  PLoS Biol       Date:  2006-06       Impact factor: 8.029

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  507 in total

1.  Symbiosis: Sheltered bacteria lose their senses.

Authors:  Andrew Jermy
Journal:  Nat Rev Microbiol       Date:  2011-12-16       Impact factor: 60.633

2.  Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts.

Authors:  Lu Fan; David Reynolds; Michael Liu; Manuel Stark; Staffan Kjelleberg; Nicole S Webster; Torsten Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-13       Impact factor: 11.205

Review 3.  Engineering ecosystems and synthetic ecologies.

Authors:  Michael T Mee; Harris H Wang
Journal:  Mol Biosyst       Date:  2012-10

4.  Endosymbiotic origin and differential loss of eukaryotic genes.

Authors:  Chuan Ku; Shijulal Nelson-Sathi; Mayo Roettger; Filipa L Sousa; Peter J Lockhart; David Bryant; Einat Hazkani-Covo; James O McInerney; Giddy Landan; William F Martin
Journal:  Nature       Date:  2015-08-19       Impact factor: 49.962

5.  Indispensability of Horizontally Transferred Genes and Its Impact on Bacterial Genome Streamlining.

Authors:  Ildikó Karcagi; Gábor Draskovits; Kinga Umenhoffer; Gergely Fekete; Károly Kovács; Orsolya Méhi; Gabriella Balikó; Balázs Szappanos; Zsuzsanna Györfy; Tamás Fehér; Balázs Bogos; Frederick R Blattner; Csaba Pál; György Pósfai; Balázs Papp
Journal:  Mol Biol Evol       Date:  2016-01-14       Impact factor: 16.240

6.  Repeated replacement of an intrabacterial symbiont in the tripartite nested mealybug symbiosis.

Authors:  Filip Husnik; John P McCutcheon
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-29       Impact factor: 11.205

7.  Genomic Comparisons of Lactobacillus crispatus and Lactobacillus iners Reveal Potential Ecological Drivers of Community Composition in the Vagina.

Authors:  Michael T France; Helena Mendes-Soares; Larry J Forney
Journal:  Appl Environ Microbiol       Date:  2016-11-21       Impact factor: 4.792

8.  Cuscuta australis (dodder) parasite eavesdrops on the host plants' FT signals to flower.

Authors:  Guojing Shen; Nian Liu; Jingxiong Zhang; Yuxing Xu; Ian T Baldwin; Jianqiang Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-31       Impact factor: 11.205

9.  Stability of a Pseudomonas putida KT2440 bacteriophage-carried genomic island and its impact on rhizosphere fitness.

Authors:  Jose M Quesada; María Isabel Soriano; Manuel Espinosa-Urgel
Journal:  Appl Environ Microbiol       Date:  2012-07-27       Impact factor: 4.792

Review 10.  Improving Sterile Insect Technique (SIT) for tsetse flies through research on their symbionts and pathogens.

Authors:  Adly M M Abd-Alla; Max Bergoin; Andrew G Parker; Nguya K Maniania; Just M Vlak; Kostas Bourtzis; Drion G Boucias; Serap Aksoy
Journal:  J Invertebr Pathol       Date:  2012-07-24       Impact factor: 2.841

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