| Literature DB >> 22064558 |
Franz Werner1, Liina Toon, Riina Aav.
Abstract
The title racemic compound, C(13)H(18)O(3), a common precursor in the total synthesis of terpenes, crystallizes with two molecules in the asymmetric unit. The crystal structure is made up of triple chains, formed by weak inter-molecular C-H⋯O contacts, propagating in the a-axis direction.Entities:
Year: 2011 PMID: 22064558 PMCID: PMC3200915 DOI: 10.1107/S1600536811034349
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H18O3 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4738 reflections | |
| θ = 2.3–25.0° | |
| µ = 0.09 mm−1 | |
| α = 102.493 (4)° | |
| β = 111.938 (4)° | Needle, colourless |
| γ = 98.665 (4)° | 0.60 × 0.40 × 0.40 mm |
| Bruker SMART X2S diffractometer | 4037 independent reflections |
| Radiation source: XOS X-beam microfocus source | 3265 reflections with |
| doubly curved silicon crystal | |
| ω scans | θmax = 25.1°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 11107 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4037 reflections | (Δ/σ)max < 0.001 |
| 291 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O11 | −0.36579 (13) | −0.13960 (12) | 0.44218 (10) | 0.0515 (3) | |
| C11 | −0.26520 (17) | −0.07427 (15) | 0.53959 (13) | 0.0353 (4) | |
| C12 | −0.11911 (18) | −0.11449 (16) | 0.59416 (15) | 0.0419 (4) | |
| H12A | −0.0964 | −0.1670 | 0.5316 | 0.050* | |
| H12B | −0.1325 | −0.1726 | 0.6425 | 0.050* | |
| C13 | 0.01603 (17) | 0.00794 (16) | 0.67085 (14) | 0.0391 (4) | |
| H13A | 0.0369 | 0.0598 | 0.6204 | 0.047* | |
| H13B | 0.1089 | −0.0228 | 0.7088 | 0.047* | |
| C14 | −0.01326 (16) | 0.10053 (15) | 0.76622 (12) | 0.0322 (3) | |
| C15 | −0.17489 (16) | 0.11996 (14) | 0.71628 (12) | 0.0303 (3) | |
| C16 | −0.28429 (16) | 0.04332 (15) | 0.61172 (13) | 0.0328 (3) | |
| H16 | −0.3796 | 0.0667 | 0.5828 | 0.039* | |
| C17 | −0.21067 (18) | 0.22780 (17) | 0.79299 (14) | 0.0413 (4) | |
| H17A | −0.2196 | 0.1967 | 0.8580 | 0.050* | |
| H17B | −0.3115 | 0.2417 | 0.7461 | 0.050* | |
| C18 | −0.08923 (19) | 0.36159 (17) | 0.84445 (14) | 0.0447 (4) | |
| H18A | −0.0967 | 0.4038 | 0.7816 | 0.054* | |
| H18B | −0.1091 | 0.4226 | 0.9044 | 0.054* | |
| C19 | 0.07257 (18) | 0.34259 (16) | 0.90015 (13) | 0.0414 (4) | |
| H19A | 0.1493 | 0.4296 | 0.9267 | 0.050* | |
| H19B | 0.0846 | 0.3117 | 0.9696 | 0.050* | |
| C110 | 0.10215 (16) | 0.24032 (16) | 0.81303 (12) | 0.0340 (3) | |
| C111 | 0.0068 (2) | 0.03947 (18) | 0.86826 (15) | 0.0474 (4) | |
| H1MA | −0.0214 | 0.0946 | 0.9250 | 0.071* | |
| H1MB | 0.1144 | 0.0370 | 0.9070 | 0.071* | |
| H1MC | −0.0598 | −0.0520 | 0.8374 | 0.071* | |
| O12 | 0.09080 (12) | 0.28742 (11) | 0.71548 (9) | 0.0387 (3) | |
| O13 | 0.25563 (12) | 0.22675 (12) | 0.86454 (10) | 0.0466 (3) | |
| C112 | 0.24137 (19) | 0.35950 (18) | 0.74068 (16) | 0.0481 (4) | |
| H1KA | 0.2594 | 0.4560 | 0.7798 | 0.058* | |
| H1KB | 0.2570 | 0.3502 | 0.6679 | 0.058* | |
| C113 | 0.3463 (2) | 0.2976 (2) | 0.82021 (19) | 0.0609 (5) | |
| H1KC | 0.3867 | 0.2354 | 0.7765 | 0.073* | |
| H1KD | 0.4343 | 0.3676 | 0.8850 | 0.073* | |
| O21 | 0.11049 (14) | 0.70843 (14) | 0.91102 (11) | 0.0569 (4) | |
| C21 | 0.19562 (17) | 0.73622 (16) | 0.86470 (13) | 0.0361 (4) | |
| C22 | 0.35845 (18) | 0.81980 (18) | 0.93451 (13) | 0.0422 (4) | |
| H22A | 0.3972 | 0.8107 | 1.0147 | 0.051* | |
| H22B | 0.3613 | 0.9155 | 0.9410 | 0.051* | |
| C23 | 0.46228 (17) | 0.77619 (16) | 0.87668 (13) | 0.0362 (4) | |
| H23A | 0.4676 | 0.6835 | 0.8780 | 0.043* | |
| H23B | 0.5676 | 0.8356 | 0.9227 | 0.043* | |
| C24 | 0.40501 (16) | 0.78078 (14) | 0.74922 (13) | 0.0303 (3) | |
| C25 | 0.23169 (16) | 0.71959 (14) | 0.68281 (12) | 0.0293 (3) | |
| C26 | 0.14168 (16) | 0.69527 (15) | 0.73754 (13) | 0.0319 (3) | |
| H26 | 0.0366 | 0.6487 | 0.6909 | 0.038* | |
| C27 | 0.16356 (19) | 0.68995 (19) | 0.55151 (13) | 0.0424 (4) | |
| H27A | 0.1637 | 0.7756 | 0.5318 | 0.051* | |
| H27B | 0.0552 | 0.6370 | 0.5181 | 0.051* | |
| C28 | 0.25155 (19) | 0.6126 (2) | 0.49578 (14) | 0.0478 (4) | |
| H28A | 0.2115 | 0.6063 | 0.4114 | 0.057* | |
| H28B | 0.2355 | 0.5202 | 0.5024 | 0.057* | |
| C29 | 0.42334 (19) | 0.68194 (18) | 0.55581 (14) | 0.0432 (4) | |
| H29A | 0.4790 | 0.6283 | 0.5206 | 0.052* | |
| H29B | 0.4404 | 0.7715 | 0.5437 | 0.052* | |
| C210 | 0.48576 (16) | 0.69737 (14) | 0.68634 (13) | 0.0307 (3) | |
| C211 | 0.4437 (2) | 0.92774 (16) | 0.74809 (17) | 0.0474 (4) | |
| H2MA | 0.3994 | 0.9313 | 0.6671 | 0.071* | |
| H2MB | 0.5558 | 0.9633 | 0.7825 | 0.071* | |
| H2MC | 0.4006 | 0.9819 | 0.7940 | 0.071* | |
| O22 | 0.46457 (11) | 0.56518 (10) | 0.69896 (9) | 0.0342 (3) | |
| O23 | 0.64712 (11) | 0.75715 (11) | 0.74433 (10) | 0.0404 (3) | |
| C212 | 0.61156 (18) | 0.54166 (18) | 0.75591 (16) | 0.0450 (4) | |
| H2KA | 0.6152 | 0.4513 | 0.7167 | 0.054* | |
| H2KB | 0.6363 | 0.5497 | 0.8394 | 0.054* | |
| C213 | 0.72049 (19) | 0.64914 (19) | 0.74471 (17) | 0.0504 (5) | |
| H2KC | 0.8229 | 0.6757 | 0.8119 | 0.061* | |
| H2KD | 0.7325 | 0.6191 | 0.6709 | 0.061* |
| O11 | 0.0446 (7) | 0.0560 (8) | 0.0396 (6) | 0.0102 (6) | 0.0118 (5) | −0.0010 (6) |
| C11 | 0.0356 (8) | 0.0356 (8) | 0.0373 (8) | 0.0059 (7) | 0.0185 (7) | 0.0120 (7) |
| C12 | 0.0409 (9) | 0.0356 (9) | 0.0503 (10) | 0.0126 (7) | 0.0197 (8) | 0.0121 (7) |
| C13 | 0.0312 (8) | 0.0383 (9) | 0.0489 (9) | 0.0115 (7) | 0.0173 (7) | 0.0126 (7) |
| C14 | 0.0288 (7) | 0.0356 (8) | 0.0339 (8) | 0.0068 (6) | 0.0124 (6) | 0.0157 (6) |
| C15 | 0.0318 (8) | 0.0333 (8) | 0.0323 (7) | 0.0078 (6) | 0.0173 (6) | 0.0159 (6) |
| C16 | 0.0278 (7) | 0.0368 (8) | 0.0351 (8) | 0.0094 (6) | 0.0129 (6) | 0.0132 (7) |
| C17 | 0.0393 (9) | 0.0487 (10) | 0.0374 (8) | 0.0138 (7) | 0.0184 (7) | 0.0093 (7) |
| C18 | 0.0508 (10) | 0.0426 (10) | 0.0354 (8) | 0.0139 (8) | 0.0164 (7) | 0.0035 (7) |
| C19 | 0.0431 (9) | 0.0406 (9) | 0.0308 (8) | 0.0023 (7) | 0.0100 (7) | 0.0072 (7) |
| C110 | 0.0289 (8) | 0.0416 (9) | 0.0305 (8) | 0.0059 (7) | 0.0087 (6) | 0.0180 (7) |
| C111 | 0.0452 (10) | 0.0507 (10) | 0.0469 (10) | 0.0079 (8) | 0.0134 (8) | 0.0297 (8) |
| O12 | 0.0366 (6) | 0.0430 (6) | 0.0369 (6) | 0.0022 (5) | 0.0142 (5) | 0.0208 (5) |
| O13 | 0.0284 (6) | 0.0571 (7) | 0.0505 (7) | 0.0056 (5) | 0.0091 (5) | 0.0259 (6) |
| C112 | 0.0457 (10) | 0.0418 (10) | 0.0585 (11) | −0.0007 (8) | 0.0275 (8) | 0.0162 (8) |
| C113 | 0.0383 (10) | 0.0721 (14) | 0.0739 (13) | 0.0040 (9) | 0.0248 (9) | 0.0291 (11) |
| O21 | 0.0482 (7) | 0.0828 (9) | 0.0488 (7) | 0.0105 (7) | 0.0316 (6) | 0.0214 (7) |
| C21 | 0.0356 (8) | 0.0407 (9) | 0.0388 (8) | 0.0134 (7) | 0.0199 (7) | 0.0144 (7) |
| C22 | 0.0397 (9) | 0.0511 (10) | 0.0296 (8) | 0.0078 (8) | 0.0147 (7) | 0.0024 (7) |
| C23 | 0.0278 (8) | 0.0430 (9) | 0.0304 (8) | 0.0041 (7) | 0.0096 (6) | 0.0045 (7) |
| C24 | 0.0291 (7) | 0.0288 (8) | 0.0342 (8) | 0.0053 (6) | 0.0152 (6) | 0.0098 (6) |
| C25 | 0.0300 (7) | 0.0275 (7) | 0.0316 (7) | 0.0116 (6) | 0.0116 (6) | 0.0107 (6) |
| C26 | 0.0256 (7) | 0.0333 (8) | 0.0349 (8) | 0.0068 (6) | 0.0112 (6) | 0.0093 (6) |
| C27 | 0.0386 (9) | 0.0596 (11) | 0.0319 (8) | 0.0185 (8) | 0.0134 (7) | 0.0174 (7) |
| C28 | 0.0480 (10) | 0.0699 (12) | 0.0254 (8) | 0.0208 (9) | 0.0148 (7) | 0.0113 (8) |
| C29 | 0.0492 (10) | 0.0544 (10) | 0.0416 (9) | 0.0204 (8) | 0.0292 (8) | 0.0213 (8) |
| C210 | 0.0283 (7) | 0.0313 (8) | 0.0369 (8) | 0.0054 (6) | 0.0175 (6) | 0.0129 (6) |
| C211 | 0.0495 (10) | 0.0315 (9) | 0.0670 (12) | 0.0072 (7) | 0.0319 (9) | 0.0147 (8) |
| O22 | 0.0310 (5) | 0.0301 (6) | 0.0454 (6) | 0.0088 (4) | 0.0180 (5) | 0.0144 (5) |
| O23 | 0.0283 (5) | 0.0391 (6) | 0.0552 (7) | 0.0036 (5) | 0.0222 (5) | 0.0120 (5) |
| C212 | 0.0372 (9) | 0.0516 (10) | 0.0562 (10) | 0.0202 (8) | 0.0222 (8) | 0.0243 (8) |
| C213 | 0.0349 (9) | 0.0589 (11) | 0.0648 (12) | 0.0165 (8) | 0.0245 (8) | 0.0228 (9) |
| O11—C11 | 1.2277 (18) | O21—C21 | 1.2211 (18) |
| C11—C16 | 1.461 (2) | C21—C26 | 1.458 (2) |
| C11—C12 | 1.497 (2) | C21—C22 | 1.500 (2) |
| C12—C13 | 1.526 (2) | C22—C23 | 1.526 (2) |
| C12—H12A | 0.9900 | C22—H22A | 0.9900 |
| C12—H12B | 0.9900 | C22—H22B | 0.9900 |
| C13—C14 | 1.538 (2) | C23—C24 | 1.538 (2) |
| C13—H13A | 0.9900 | C23—H23A | 0.9900 |
| C13—H13B | 0.9900 | C23—H23B | 0.9900 |
| C14—C15 | 1.519 (2) | C24—C25 | 1.526 (2) |
| C14—C111 | 1.546 (2) | C24—C211 | 1.544 (2) |
| C14—C110 | 1.550 (2) | C24—C210 | 1.553 (2) |
| C15—C16 | 1.339 (2) | C25—C26 | 1.338 (2) |
| C15—C17 | 1.509 (2) | C25—C27 | 1.505 (2) |
| C16—H16 | 0.9500 | C26—H26 | 0.9500 |
| C17—C18 | 1.526 (2) | C27—C28 | 1.523 (2) |
| C17—H17A | 0.9900 | C27—H27A | 0.9900 |
| C17—H17B | 0.9900 | C27—H27B | 0.9900 |
| C18—C19 | 1.525 (2) | C28—C29 | 1.526 (2) |
| C18—H18A | 0.9900 | C28—H28A | 0.9900 |
| C18—H18B | 0.9900 | C28—H28B | 0.9900 |
| C19—C110 | 1.521 (2) | C29—C210 | 1.519 (2) |
| C19—H19A | 0.9900 | C29—H29A | 0.9900 |
| C19—H19B | 0.9900 | C29—H29B | 0.9900 |
| C110—O12 | 1.4209 (17) | C210—O23 | 1.4229 (17) |
| C110—O13 | 1.4276 (18) | C210—O22 | 1.4320 (18) |
| C111—H1MA | 0.9800 | C211—H2MA | 0.9800 |
| C111—H1MB | 0.9800 | C211—H2MB | 0.9800 |
| C111—H1MC | 0.9800 | C211—H2MC | 0.9800 |
| O12—C112 | 1.4197 (19) | O22—C212 | 1.4250 (18) |
| O13—C113 | 1.420 (2) | O23—C213 | 1.431 (2) |
| C112—C113 | 1.490 (3) | C212—C213 | 1.498 (2) |
| C112—H1KA | 0.9900 | C212—H2KA | 0.9900 |
| C112—H1KB | 0.9900 | C212—H2KB | 0.9900 |
| C113—H1KC | 0.9900 | C213—H2KC | 0.9900 |
| C113—H1KD | 0.9900 | C213—H2KD | 0.9900 |
| O11—C11—C16 | 121.98 (14) | O21—C21—C26 | 121.53 (14) |
| O11—C11—C12 | 121.98 (14) | O21—C21—C22 | 122.15 (14) |
| C16—C11—C12 | 115.96 (13) | C26—C21—C22 | 116.25 (13) |
| C11—C12—C13 | 111.41 (13) | C21—C22—C23 | 110.97 (12) |
| C11—C12—H12A | 109.3 | C21—C22—H22A | 109.4 |
| C13—C12—H12A | 109.3 | C23—C22—H22A | 109.4 |
| C11—C12—H12B | 109.3 | C21—C22—H22B | 109.4 |
| C13—C12—H12B | 109.3 | C23—C22—H22B | 109.4 |
| H12A—C12—H12B | 108.0 | H22A—C22—H22B | 108.0 |
| C12—C13—C14 | 113.01 (12) | C22—C23—C24 | 112.62 (13) |
| C12—C13—H13A | 109.0 | C22—C23—H23A | 109.1 |
| C14—C13—H13A | 109.0 | C24—C23—H23A | 109.1 |
| C12—C13—H13B | 109.0 | C22—C23—H23B | 109.1 |
| C14—C13—H13B | 109.0 | C24—C23—H23B | 109.1 |
| H13A—C13—H13B | 107.8 | H23A—C23—H23B | 107.8 |
| C15—C14—C13 | 110.68 (12) | C25—C24—C23 | 110.83 (11) |
| C15—C14—C111 | 109.19 (12) | C25—C24—C211 | 109.70 (13) |
| C13—C14—C111 | 110.03 (13) | C23—C24—C211 | 109.57 (13) |
| C15—C14—C110 | 107.85 (12) | C25—C24—C210 | 108.00 (11) |
| C13—C14—C110 | 109.46 (12) | C23—C24—C210 | 109.07 (12) |
| C111—C14—C110 | 109.59 (12) | C211—C24—C210 | 109.64 (12) |
| C16—C15—C17 | 120.37 (13) | C26—C25—C27 | 120.58 (13) |
| C16—C15—C14 | 122.92 (13) | C26—C25—C24 | 122.30 (13) |
| C17—C15—C14 | 116.66 (13) | C27—C25—C24 | 117.11 (12) |
| C15—C16—C11 | 123.62 (14) | C25—C26—C21 | 123.76 (13) |
| C15—C16—H16 | 118.2 | C25—C26—H26 | 118.1 |
| C11—C16—H16 | 118.2 | C21—C26—H26 | 118.1 |
| C15—C17—C18 | 113.34 (13) | C25—C27—C28 | 112.53 (13) |
| C15—C17—H17A | 108.9 | C25—C27—H27A | 109.1 |
| C18—C17—H17A | 108.9 | C28—C27—H27A | 109.1 |
| C15—C17—H17B | 108.9 | C25—C27—H27B | 109.1 |
| C18—C17—H17B | 108.9 | C28—C27—H27B | 109.1 |
| H17A—C17—H17B | 107.7 | H27A—C27—H27B | 107.8 |
| C19—C18—C17 | 111.26 (14) | C27—C28—C29 | 110.82 (14) |
| C19—C18—H18A | 109.4 | C27—C28—H28A | 109.5 |
| C17—C18—H18A | 109.4 | C29—C28—H28A | 109.5 |
| C19—C18—H18B | 109.4 | C27—C28—H28B | 109.5 |
| C17—C18—H18B | 109.4 | C29—C28—H28B | 109.5 |
| H18A—C18—H18B | 108.0 | H28A—C28—H28B | 108.1 |
| C110—C19—C18 | 110.78 (12) | C210—C29—C28 | 110.28 (12) |
| C110—C19—H19A | 109.5 | C210—C29—H29A | 109.6 |
| C18—C19—H19A | 109.5 | C28—C29—H29A | 109.6 |
| C110—C19—H19B | 109.5 | C210—C29—H29B | 109.6 |
| C18—C19—H19B | 109.5 | C28—C29—H29B | 109.6 |
| H19A—C19—H19B | 108.1 | H29A—C29—H29B | 108.1 |
| O12—C110—O13 | 106.21 (11) | O23—C210—O22 | 106.12 (11) |
| O12—C110—C19 | 109.37 (13) | O23—C210—C29 | 111.74 (12) |
| O13—C110—C19 | 110.38 (12) | O22—C210—C29 | 107.31 (12) |
| O12—C110—C14 | 107.96 (11) | O23—C210—C24 | 108.53 (11) |
| O13—C110—C14 | 109.50 (12) | O22—C210—C24 | 109.70 (11) |
| C19—C110—C14 | 113.15 (12) | C29—C210—C24 | 113.19 (13) |
| C14—C111—H1MA | 109.5 | C24—C211—H2MA | 109.5 |
| C14—C111—H1MB | 109.5 | C24—C211—H2MB | 109.5 |
| H1MA—C111—H1MB | 109.5 | H2MA—C211—H2MB | 109.5 |
| C14—C111—H1MC | 109.5 | C24—C211—H2MC | 109.5 |
| H1MA—C111—H1MC | 109.5 | H2MA—C211—H2MC | 109.5 |
| H1MB—C111—H1MC | 109.5 | H2MB—C211—H2MC | 109.5 |
| C112—O12—C110 | 106.80 (11) | C212—O22—C210 | 109.00 (11) |
| C113—O13—C110 | 108.60 (13) | C210—O23—C213 | 106.50 (12) |
| O12—C112—C113 | 104.81 (13) | O22—C212—C213 | 103.85 (13) |
| O12—C112—H1KA | 110.8 | O22—C212—H2KA | 111.0 |
| C113—C112—H1KA | 110.8 | C213—C212—H2KA | 111.0 |
| O12—C112—H1KB | 110.8 | O22—C212—H2KB | 111.0 |
| C113—C112—H1KB | 110.8 | C213—C212—H2KB | 111.0 |
| H1KA—C112—H1KB | 108.9 | H2KA—C212—H2KB | 109.0 |
| O13—C113—C112 | 105.70 (14) | O23—C213—C212 | 103.06 (13) |
| O13—C113—H1KC | 110.6 | O23—C213—H2KC | 111.2 |
| C112—C113—H1KC | 110.6 | C212—C213—H2KC | 111.2 |
| O13—C113—H1KD | 110.6 | O23—C213—H2KD | 111.2 |
| C112—C113—H1KD | 110.6 | C212—C213—H2KD | 111.2 |
| H1KC—C113—H1KD | 108.7 | H2KC—C213—H2KD | 109.1 |
| H··· | ||||
| C213—H2KC···O21i | 0.99 | 2.52 | 3.450 (2) | 156. |
| C16—H16···O11ii | 0.95 | 2.62 | 3.547 (2) | 166. |
| C17—H17A···O21iii | 0.99 | 2.65 | 3.441 (2) | 137. |
| C113—H1KC···O11iv | 0.99 | 2.70 | 3.515 (3) | 140. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C213—H2 | 0.99 | 2.52 | 3.450 (2) | 156 |
| C16—H16⋯O11ii | 0.95 | 2.62 | 3.547 (2) | 166 |
| C17—H17 | 0.99 | 2.65 | 3.441 (2) | 137 |
| C113—H1 | 0.99 | 2.70 | 3.515 (3) | 140 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .