Literature DB >> 22064558

rac-8a'-Methyl-3',4',8',8a'-tetra-hydro-2'H-spiro-[[1,3]dioxolane-2,1'-naphthalen]-6'(7'H)-one.

Franz Werner1, Liina Toon, Riina Aav.   

Abstract

The title racemic compound, C(13)H(18)O(3), a common precursor in the total synthesis of terpenes, crystallizes with two molecules in the asymmetric unit. The crystal structure is made up of triple chains, formed by weak inter-molecular C-H⋯O contacts, propagating in the a-axis direction.

Entities:  

Year:  2011        PMID: 22064558      PMCID: PMC3200915          DOI: 10.1107/S1600536811034349

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound, see: Smith et al. (2007 ▶). For the crystal structure of the educt, 9-methyl-Δ5,10-deca­lin-1,6-dione, see: Jones et al. (1973 ▶). For application of the title compound as a precursor in the synthesis of terpenes, see: Foot et al. (2006 ▶); Hatzellis et al. (2004 ▶); Coltart & Danishefsky (2003 ▶).

Experimental

Crystal data

C13H18O3 M = 222.27 Triclinic, a = 9.6841 (15) Å b = 10.5515 (14) Å c = 12.8717 (19) Å α = 102.493 (4)° β = 111.938 (4)° γ = 98.665 (4)° V = 1151.6 (3) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 200 K 0.60 × 0.40 × 0.40 mm

Data collection

Bruker SMART X2S diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.948, T max = 0.965 11107 measured reflections 4037 independent reflections 3265 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.106 S = 1.05 4037 reflections 291 parameters H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.19 e Å−3 Data collection: GIS (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶), OLEX2 (Dolomanov et al., 2009 ▶) and VESTA (Momma & Izumi, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811034349/su2308sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034349/su2308Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811034349/su2308Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H18O3Z = 4
Mr = 222.27F(000) = 480
Triclinic, P1Dx = 1.282 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.6841 (15) ÅCell parameters from 4738 reflections
b = 10.5515 (14) Åθ = 2.3–25.0°
c = 12.8717 (19) ŵ = 0.09 mm1
α = 102.493 (4)°T = 200 K
β = 111.938 (4)°Needle, colourless
γ = 98.665 (4)°0.60 × 0.40 × 0.40 mm
V = 1151.6 (3) Å3
Bruker SMART X2S diffractometer4037 independent reflections
Radiation source: XOS X-beam microfocus source3265 reflections with I > 2σ(I)
doubly curved silicon crystalRint = 0.032
ω scansθmax = 25.1°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.948, Tmax = 0.965k = −12→12
11107 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0516P)2 + 0.2344P] where P = (Fo2 + 2Fc2)/3
4037 reflections(Δ/σ)max < 0.001
291 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11−0.36579 (13)−0.13960 (12)0.44218 (10)0.0515 (3)
C11−0.26520 (17)−0.07427 (15)0.53959 (13)0.0353 (4)
C12−0.11911 (18)−0.11449 (16)0.59416 (15)0.0419 (4)
H12A−0.0964−0.16700.53160.050*
H12B−0.1325−0.17260.64250.050*
C130.01603 (17)0.00794 (16)0.67085 (14)0.0391 (4)
H13A0.03690.05980.62040.047*
H13B0.1089−0.02280.70880.047*
C14−0.01326 (16)0.10053 (15)0.76622 (12)0.0322 (3)
C15−0.17489 (16)0.11996 (14)0.71628 (12)0.0303 (3)
C16−0.28429 (16)0.04332 (15)0.61172 (13)0.0328 (3)
H16−0.37960.06670.58280.039*
C17−0.21067 (18)0.22780 (17)0.79299 (14)0.0413 (4)
H17A−0.21960.19670.85800.050*
H17B−0.31150.24170.74610.050*
C18−0.08923 (19)0.36159 (17)0.84445 (14)0.0447 (4)
H18A−0.09670.40380.78160.054*
H18B−0.10910.42260.90440.054*
C190.07257 (18)0.34259 (16)0.90015 (13)0.0414 (4)
H19A0.14930.42960.92670.050*
H19B0.08460.31170.96960.050*
C1100.10215 (16)0.24032 (16)0.81303 (12)0.0340 (3)
C1110.0068 (2)0.03947 (18)0.86826 (15)0.0474 (4)
H1MA−0.02140.09460.92500.071*
H1MB0.11440.03700.90700.071*
H1MC−0.0598−0.05200.83740.071*
O120.09080 (12)0.28742 (11)0.71548 (9)0.0387 (3)
O130.25563 (12)0.22675 (12)0.86454 (10)0.0466 (3)
C1120.24137 (19)0.35950 (18)0.74068 (16)0.0481 (4)
H1KA0.25940.45600.77980.058*
H1KB0.25700.35020.66790.058*
C1130.3463 (2)0.2976 (2)0.82021 (19)0.0609 (5)
H1KC0.38670.23540.77650.073*
H1KD0.43430.36760.88500.073*
O210.11049 (14)0.70843 (14)0.91102 (11)0.0569 (4)
C210.19562 (17)0.73622 (16)0.86470 (13)0.0361 (4)
C220.35845 (18)0.81980 (18)0.93451 (13)0.0422 (4)
H22A0.39720.81071.01470.051*
H22B0.36130.91550.94100.051*
C230.46228 (17)0.77619 (16)0.87668 (13)0.0362 (4)
H23A0.46760.68350.87800.043*
H23B0.56760.83560.92270.043*
C240.40501 (16)0.78078 (14)0.74922 (13)0.0303 (3)
C250.23169 (16)0.71959 (14)0.68281 (12)0.0293 (3)
C260.14168 (16)0.69527 (15)0.73754 (13)0.0319 (3)
H260.03660.64870.69090.038*
C270.16356 (19)0.68995 (19)0.55151 (13)0.0424 (4)
H27A0.16370.77560.53180.051*
H27B0.05520.63700.51810.051*
C280.25155 (19)0.6126 (2)0.49578 (14)0.0478 (4)
H28A0.21150.60630.41140.057*
H28B0.23550.52020.50240.057*
C290.42334 (19)0.68194 (18)0.55581 (14)0.0432 (4)
H29A0.47900.62830.52060.052*
H29B0.44040.77150.54370.052*
C2100.48576 (16)0.69737 (14)0.68634 (13)0.0307 (3)
C2110.4437 (2)0.92774 (16)0.74809 (17)0.0474 (4)
H2MA0.39940.93130.66710.071*
H2MB0.55580.96330.78250.071*
H2MC0.40060.98190.79400.071*
O220.46457 (11)0.56518 (10)0.69896 (9)0.0342 (3)
O230.64712 (11)0.75715 (11)0.74433 (10)0.0404 (3)
C2120.61156 (18)0.54166 (18)0.75591 (16)0.0450 (4)
H2KA0.61520.45130.71670.054*
H2KB0.63630.54970.83940.054*
C2130.72049 (19)0.64914 (19)0.74471 (17)0.0504 (5)
H2KC0.82290.67570.81190.061*
H2KD0.73250.61910.67090.061*
U11U22U33U12U13U23
O110.0446 (7)0.0560 (8)0.0396 (6)0.0102 (6)0.0118 (5)−0.0010 (6)
C110.0356 (8)0.0356 (8)0.0373 (8)0.0059 (7)0.0185 (7)0.0120 (7)
C120.0409 (9)0.0356 (9)0.0503 (10)0.0126 (7)0.0197 (8)0.0121 (7)
C130.0312 (8)0.0383 (9)0.0489 (9)0.0115 (7)0.0173 (7)0.0126 (7)
C140.0288 (7)0.0356 (8)0.0339 (8)0.0068 (6)0.0124 (6)0.0157 (6)
C150.0318 (8)0.0333 (8)0.0323 (7)0.0078 (6)0.0173 (6)0.0159 (6)
C160.0278 (7)0.0368 (8)0.0351 (8)0.0094 (6)0.0129 (6)0.0132 (7)
C170.0393 (9)0.0487 (10)0.0374 (8)0.0138 (7)0.0184 (7)0.0093 (7)
C180.0508 (10)0.0426 (10)0.0354 (8)0.0139 (8)0.0164 (7)0.0035 (7)
C190.0431 (9)0.0406 (9)0.0308 (8)0.0023 (7)0.0100 (7)0.0072 (7)
C1100.0289 (8)0.0416 (9)0.0305 (8)0.0059 (7)0.0087 (6)0.0180 (7)
C1110.0452 (10)0.0507 (10)0.0469 (10)0.0079 (8)0.0134 (8)0.0297 (8)
O120.0366 (6)0.0430 (6)0.0369 (6)0.0022 (5)0.0142 (5)0.0208 (5)
O130.0284 (6)0.0571 (7)0.0505 (7)0.0056 (5)0.0091 (5)0.0259 (6)
C1120.0457 (10)0.0418 (10)0.0585 (11)−0.0007 (8)0.0275 (8)0.0162 (8)
C1130.0383 (10)0.0721 (14)0.0739 (13)0.0040 (9)0.0248 (9)0.0291 (11)
O210.0482 (7)0.0828 (9)0.0488 (7)0.0105 (7)0.0316 (6)0.0214 (7)
C210.0356 (8)0.0407 (9)0.0388 (8)0.0134 (7)0.0199 (7)0.0144 (7)
C220.0397 (9)0.0511 (10)0.0296 (8)0.0078 (8)0.0147 (7)0.0024 (7)
C230.0278 (8)0.0430 (9)0.0304 (8)0.0041 (7)0.0096 (6)0.0045 (7)
C240.0291 (7)0.0288 (8)0.0342 (8)0.0053 (6)0.0152 (6)0.0098 (6)
C250.0300 (7)0.0275 (7)0.0316 (7)0.0116 (6)0.0116 (6)0.0107 (6)
C260.0256 (7)0.0333 (8)0.0349 (8)0.0068 (6)0.0112 (6)0.0093 (6)
C270.0386 (9)0.0596 (11)0.0319 (8)0.0185 (8)0.0134 (7)0.0174 (7)
C280.0480 (10)0.0699 (12)0.0254 (8)0.0208 (9)0.0148 (7)0.0113 (8)
C290.0492 (10)0.0544 (10)0.0416 (9)0.0204 (8)0.0292 (8)0.0213 (8)
C2100.0283 (7)0.0313 (8)0.0369 (8)0.0054 (6)0.0175 (6)0.0129 (6)
C2110.0495 (10)0.0315 (9)0.0670 (12)0.0072 (7)0.0319 (9)0.0147 (8)
O220.0310 (5)0.0301 (6)0.0454 (6)0.0088 (4)0.0180 (5)0.0144 (5)
O230.0283 (5)0.0391 (6)0.0552 (7)0.0036 (5)0.0222 (5)0.0120 (5)
C2120.0372 (9)0.0516 (10)0.0562 (10)0.0202 (8)0.0222 (8)0.0243 (8)
C2130.0349 (9)0.0589 (11)0.0648 (12)0.0165 (8)0.0245 (8)0.0228 (9)
O11—C111.2277 (18)O21—C211.2211 (18)
C11—C161.461 (2)C21—C261.458 (2)
C11—C121.497 (2)C21—C221.500 (2)
C12—C131.526 (2)C22—C231.526 (2)
C12—H12A0.9900C22—H22A0.9900
C12—H12B0.9900C22—H22B0.9900
C13—C141.538 (2)C23—C241.538 (2)
C13—H13A0.9900C23—H23A0.9900
C13—H13B0.9900C23—H23B0.9900
C14—C151.519 (2)C24—C251.526 (2)
C14—C1111.546 (2)C24—C2111.544 (2)
C14—C1101.550 (2)C24—C2101.553 (2)
C15—C161.339 (2)C25—C261.338 (2)
C15—C171.509 (2)C25—C271.505 (2)
C16—H160.9500C26—H260.9500
C17—C181.526 (2)C27—C281.523 (2)
C17—H17A0.9900C27—H27A0.9900
C17—H17B0.9900C27—H27B0.9900
C18—C191.525 (2)C28—C291.526 (2)
C18—H18A0.9900C28—H28A0.9900
C18—H18B0.9900C28—H28B0.9900
C19—C1101.521 (2)C29—C2101.519 (2)
C19—H19A0.9900C29—H29A0.9900
C19—H19B0.9900C29—H29B0.9900
C110—O121.4209 (17)C210—O231.4229 (17)
C110—O131.4276 (18)C210—O221.4320 (18)
C111—H1MA0.9800C211—H2MA0.9800
C111—H1MB0.9800C211—H2MB0.9800
C111—H1MC0.9800C211—H2MC0.9800
O12—C1121.4197 (19)O22—C2121.4250 (18)
O13—C1131.420 (2)O23—C2131.431 (2)
C112—C1131.490 (3)C212—C2131.498 (2)
C112—H1KA0.9900C212—H2KA0.9900
C112—H1KB0.9900C212—H2KB0.9900
C113—H1KC0.9900C213—H2KC0.9900
C113—H1KD0.9900C213—H2KD0.9900
O11—C11—C16121.98 (14)O21—C21—C26121.53 (14)
O11—C11—C12121.98 (14)O21—C21—C22122.15 (14)
C16—C11—C12115.96 (13)C26—C21—C22116.25 (13)
C11—C12—C13111.41 (13)C21—C22—C23110.97 (12)
C11—C12—H12A109.3C21—C22—H22A109.4
C13—C12—H12A109.3C23—C22—H22A109.4
C11—C12—H12B109.3C21—C22—H22B109.4
C13—C12—H12B109.3C23—C22—H22B109.4
H12A—C12—H12B108.0H22A—C22—H22B108.0
C12—C13—C14113.01 (12)C22—C23—C24112.62 (13)
C12—C13—H13A109.0C22—C23—H23A109.1
C14—C13—H13A109.0C24—C23—H23A109.1
C12—C13—H13B109.0C22—C23—H23B109.1
C14—C13—H13B109.0C24—C23—H23B109.1
H13A—C13—H13B107.8H23A—C23—H23B107.8
C15—C14—C13110.68 (12)C25—C24—C23110.83 (11)
C15—C14—C111109.19 (12)C25—C24—C211109.70 (13)
C13—C14—C111110.03 (13)C23—C24—C211109.57 (13)
C15—C14—C110107.85 (12)C25—C24—C210108.00 (11)
C13—C14—C110109.46 (12)C23—C24—C210109.07 (12)
C111—C14—C110109.59 (12)C211—C24—C210109.64 (12)
C16—C15—C17120.37 (13)C26—C25—C27120.58 (13)
C16—C15—C14122.92 (13)C26—C25—C24122.30 (13)
C17—C15—C14116.66 (13)C27—C25—C24117.11 (12)
C15—C16—C11123.62 (14)C25—C26—C21123.76 (13)
C15—C16—H16118.2C25—C26—H26118.1
C11—C16—H16118.2C21—C26—H26118.1
C15—C17—C18113.34 (13)C25—C27—C28112.53 (13)
C15—C17—H17A108.9C25—C27—H27A109.1
C18—C17—H17A108.9C28—C27—H27A109.1
C15—C17—H17B108.9C25—C27—H27B109.1
C18—C17—H17B108.9C28—C27—H27B109.1
H17A—C17—H17B107.7H27A—C27—H27B107.8
C19—C18—C17111.26 (14)C27—C28—C29110.82 (14)
C19—C18—H18A109.4C27—C28—H28A109.5
C17—C18—H18A109.4C29—C28—H28A109.5
C19—C18—H18B109.4C27—C28—H28B109.5
C17—C18—H18B109.4C29—C28—H28B109.5
H18A—C18—H18B108.0H28A—C28—H28B108.1
C110—C19—C18110.78 (12)C210—C29—C28110.28 (12)
C110—C19—H19A109.5C210—C29—H29A109.6
C18—C19—H19A109.5C28—C29—H29A109.6
C110—C19—H19B109.5C210—C29—H29B109.6
C18—C19—H19B109.5C28—C29—H29B109.6
H19A—C19—H19B108.1H29A—C29—H29B108.1
O12—C110—O13106.21 (11)O23—C210—O22106.12 (11)
O12—C110—C19109.37 (13)O23—C210—C29111.74 (12)
O13—C110—C19110.38 (12)O22—C210—C29107.31 (12)
O12—C110—C14107.96 (11)O23—C210—C24108.53 (11)
O13—C110—C14109.50 (12)O22—C210—C24109.70 (11)
C19—C110—C14113.15 (12)C29—C210—C24113.19 (13)
C14—C111—H1MA109.5C24—C211—H2MA109.5
C14—C111—H1MB109.5C24—C211—H2MB109.5
H1MA—C111—H1MB109.5H2MA—C211—H2MB109.5
C14—C111—H1MC109.5C24—C211—H2MC109.5
H1MA—C111—H1MC109.5H2MA—C211—H2MC109.5
H1MB—C111—H1MC109.5H2MB—C211—H2MC109.5
C112—O12—C110106.80 (11)C212—O22—C210109.00 (11)
C113—O13—C110108.60 (13)C210—O23—C213106.50 (12)
O12—C112—C113104.81 (13)O22—C212—C213103.85 (13)
O12—C112—H1KA110.8O22—C212—H2KA111.0
C113—C112—H1KA110.8C213—C212—H2KA111.0
O12—C112—H1KB110.8O22—C212—H2KB111.0
C113—C112—H1KB110.8C213—C212—H2KB111.0
H1KA—C112—H1KB108.9H2KA—C212—H2KB109.0
O13—C113—C112105.70 (14)O23—C213—C212103.06 (13)
O13—C113—H1KC110.6O23—C213—H2KC111.2
C112—C113—H1KC110.6C212—C213—H2KC111.2
O13—C113—H1KD110.6O23—C213—H2KD111.2
C112—C113—H1KD110.6C212—C213—H2KD111.2
H1KC—C113—H1KD108.7H2KC—C213—H2KD109.1
D—H···AD—HH···AD···AD—H···A
C213—H2KC···O21i0.992.523.450 (2)156.
C16—H16···O11ii0.952.623.547 (2)166.
C17—H17A···O21iii0.992.653.441 (2)137.
C113—H1KC···O11iv0.992.703.515 (3)140.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C213—H2KC⋯O21i0.992.523.450 (2)156
C16—H16⋯O11ii0.952.623.547 (2)166
C17—H17A⋯O21iii0.992.653.441 (2)137
C113—H1KC⋯O11iv0.992.703.515 (3)140

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

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