Literature DB >> 22063273

Rotational and hinge dynamics of discoidal high density lipoproteins probed by interchain disulfide bond formation.

Ling Li1, Songlin Li, Martin K Jones, Jere P Segrest.   

Abstract

To develop a detailed double belt model for discoidal HDL, we previously scored inter-helical salt bridges between all possible registries of two stacked antiparallel amphipathic helical rings of apolipoprotein (apo) A-I. The top score was the antiparallel apposition of helix 5 with 5 followed closely by appositions of helix 5 with 4 and helix 5 with 6. The rationale for the current study is that, for each of the optimal scores, a pair of identical residues can be identified in juxtaposition directly on the contact edge between the two antiparallel helical belts of apoA-I. Further, these residues are always in the '9th position' in one of the eighteen 11-mer repeats that make up the lipid-associating domain of apoA-I. To illustrate our terminology, 129j (LL5/5) refers to the juxtaposition of the Cα atoms of G129 (in a '9th position') in the pairwise helix 5 domains. We reasoned that if identical residues in the double belt juxtapositions were mutated to a cysteine and kept under reducing conditions during disc formation, we would have a precise method for determining registration in discoidal HDL by formation of a disulfide-linked apoA-I homodimer. Using this approach, we conclude that 129j (LL5/5) is the major rotamer orientation for double belt HDL and propose that the small ubiquitous gap between the pairwise helix 5 portions of the double belt in larger HDL discoidal particles is significantly dynamic to hinge off the disc edge under certain conditions, e.g., in smaller particles or perhaps following binding of the enzyme LCAT. This article is part of a Special Issue entitled Advances in High Density Lipoprotein Formation and Metabolism: A Tribute to John F. Oram (1945-2010). Copyright Â
© 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 22063273      PMCID: PMC3666556          DOI: 10.1016/j.bbalip.2011.10.013

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  45 in total

1.  Length scales of lipid dynamics and molecular dynamics.

Authors:  S E Feller; R W Pastor
Journal:  Pac Symp Biocomput       Date:  1997

2.  A molecular theory of lipid-protein interactions in the plasma lipoproteins.

Authors:  J P Segrest; R L Jackson; J D Morrisett; A M Gotto
Journal:  FEBS Lett       Date:  1974-01-15       Impact factor: 4.124

3.  Cryo-electron microscopy of low density lipoprotein and reconstituted discoidal high density lipoprotein: imaging of the apolipoprotein moiety.

Authors:  R van Antwerpen; G C Chen; C R Pullinger; J P Kane; M LaBelle; R M Krauss; C Luna-Chavez; T M Forte; J C Gilkey
Journal:  J Lipid Res       Date:  1997-04       Impact factor: 5.922

4.  Structural determination of lipid-bound ApoA-I using fluorescence resonance energy transfer.

Authors:  H Li; D S Lyles; M J Thomas; W Pan; M G Sorci-Thomas
Journal:  J Biol Chem       Date:  2000-11-24       Impact factor: 5.157

5.  Intermolecular contact between globular N-terminal fold and C-terminal domain of ApoA-I stabilizes its lipid-bound conformation: studies employing chemical cross-linking and mass spectrometry.

Authors:  Shaila Bhat; Mary G Sorci-Thomas; Eric T Alexander; Michael P Samuel; Michael J Thomas
Journal:  J Biol Chem       Date:  2005-06-22       Impact factor: 5.157

6.  Crystal structure of truncated human apolipoprotein A-I suggests a lipid-bound conformation.

Authors:  D W Borhani; D P Rogers; J A Engler; C G Brouillette
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

7.  Characterization of apolipoprotein A-I structure using a cysteine-specific fluorescence probe.

Authors:  M A Tricerri; A K Behling Agree; S A Sanchez; A Jonas
Journal:  Biochemistry       Date:  2000-11-28       Impact factor: 3.162

8.  A structural and functional role for 11-mer repeats in alpha-synuclein and other exchangeable lipid binding proteins.

Authors:  Robert Bussell; David Eliezer
Journal:  J Mol Biol       Date:  2003-06-13       Impact factor: 5.469

9.  The C-terminal domain of apolipoprotein A-I contains a lipid-sensitive conformational trigger.

Authors:  Michael N Oda; Trudy M Forte; Robert O Ryan; John C Voss
Journal:  Nat Struct Biol       Date:  2003-06

10.  Heterogeneity of dog interstitial fluid (peripheral lymph) high density lipoproteins: implications for a role in reverse cholesterol transport.

Authors:  L Dory; L M Boquet; R L Hamilton; C H Sloop; P S Roheim
Journal:  J Lipid Res       Date:  1985-05       Impact factor: 5.922

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  17 in total

1.  Validation of previous computer models and MD simulations of discoidal HDL by a recent crystal structure of apoA-I.

Authors:  Jere P Segrest; Martin K Jones; Andrea Catte; Saravana P Thirumuruganandham
Journal:  J Lipid Res       Date:  2012-07-08       Impact factor: 5.922

2.  A robust all-atom model for LCAT generated by homology modeling.

Authors:  Jere P Segrest; Martin K Jones; Andrea Catte; Saravana P Thirumuruganandham
Journal:  J Lipid Res       Date:  2015-01-14       Impact factor: 5.922

3.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

4.  A thumbwheel mechanism for APOA1 activation of LCAT activity in HDL.

Authors:  Allison L Cooke; Jamie Morris; John T Melchior; Scott E Street; W Gray Jerome; Rong Huang; Andrew B Herr; Loren E Smith; Jere P Segrest; Alan T Remaley; Amy S Shah; Thomas B Thompson; W Sean Davidson
Journal:  J Lipid Res       Date:  2018-05-17       Impact factor: 5.922

5.  Apolipoprotein A-I helical structure and stability in discoidal high-density lipoprotein (HDL) particles by hydrogen exchange and mass spectrometry.

Authors:  Palaniappan Sevugan Chetty; Leland Mayne; Zhong-Yuan Kan; Sissel Lund-Katz; S Walter Englander; Michael C Phillips
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-27       Impact factor: 11.205

6.  Molecular dynamics simulations of lipid nanodiscs.

Authors:  Mohsen Pourmousa; Richard W Pastor
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-05-03       Impact factor: 3.747

7.  Hydrophobic amino acids in the hinge region of the 5A apolipoprotein mimetic peptide are essential for promoting cholesterol efflux by the ABCA1 transporter.

Authors:  Denis O Sviridov; Alexander M Andrianov; Ivan V Anishchenko; John A Stonik; Marcelo J A Amar; Scott Turner; Alan T Remaley
Journal:  J Pharmacol Exp Ther       Date:  2012-10-05       Impact factor: 4.030

8.  The low-resolution structure of nHDL reconstituted with DMPC with and without cholesterol reveals a mechanism for particle expansion.

Authors:  Valentin Gogonea; Gary S Gerstenecker; Zhiping Wu; Xavier Lee; Celalettin Topbas; Matthew A Wagner; Thomas C Tallant; Jonathan D Smith; Philip Callow; Vitaliy Pipich; Hélène Malet; Guy Schoehn; Joseph A DiDonato; Stanley L Hazen
Journal:  J Lipid Res       Date:  2013-01-23       Impact factor: 5.922

9.  High-Density Lipoprotein Biogenesis: Defining the Domains Involved in Human Apolipoprotein A-I Lipidation.

Authors:  Ricquita D Pollard; Brian Fulp; Mary G Sorci-Thomas; Michael J Thomas
Journal:  Biochemistry       Date:  2016-08-23       Impact factor: 3.162

Review 10.  ApoA1 and ApoA1-specific self-antibodies in cardiovascular disease.

Authors:  Dimitry A Chistiakov; Alexander N Orekhov; Yuri V Bobryshev
Journal:  Lab Invest       Date:  2016-05-16       Impact factor: 5.662

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