| Literature DB >> 22059070 |
Tobias Gruber, Frank Eissmann, Edwin Weber, Gerrit Schüürmann.
Abstract
In the main mol-ecule of the title compound, C(13)H(11)N(2)O(3) (+)·ClO(4) (-), the two aromatic rings are twisted by 56.19 (3)° relative to each other and the nitro group is not coplanar with the benzene ring [36.43 (4)°]. The crystal packing is dominated by infinite aromatic stacks in the a-axis direction. These are formed by the benzene units of the mol-ecule featuring an alternating arrangement, which explains the two different distances of 3.3860 (4) and 3.4907 (4) Å for the aromatic units (these are the perpendicular distances of the centroid of one aromatic ring on the mean plane of the other other aromatic ring). Adjacent stacks are connected by π-π stacking between two pyridinium units [3.5949 (4) Å] and weak C-H⋯O inter-actions. The perchlorate anions are accomodated in the lattice voids connected to the cation via weak C-H⋯O contacts between the O atoms of the anion and various aromatic as well as methyl H atoms.Entities:
Year: 2011 PMID: 22059070 PMCID: PMC3200796 DOI: 10.1107/S1600536811034945
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H11N2O3+·ClO4− | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 6858 reflections | |
| θ = 2.7–44.1° | |
| µ = 0.31 mm−1 | |
| α = 105.980 (2)° | |
| β = 104.119 (1)° | Piece, colourless |
| γ = 99.138 (1)° | 0.45 × 0.39 × 0.15 mm |
| Bruker Kappa APEXII CCD diffractometer | 5199 independent reflections |
| Radiation source: fine-focus sealed tube | 4759 reflections with |
| graphite | |
| φ and ω scans | θmax = 32.5°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 20599 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 5199 reflections | (Δ/σ)max = 0.001 |
| 209 parameters | Δρmax = 0.65 e Å−3 |
| 0 restraints | Δρmin = −0.46 e Å−3 |
| Experimental. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.21076 (10) | 0.03649 (11) | 0.75601 (6) | 0.02567 (14) | |
| O2 | 0.48688 (9) | 0.15551 (10) | 0.77549 (6) | 0.02398 (14) | |
| O3 | 0.09175 (9) | −0.25751 (9) | 0.16586 (6) | 0.02171 (13) | |
| N1 | 0.33202 (10) | 0.07804 (10) | 0.71642 (6) | 0.01796 (13) | |
| N2 | 0.23169 (10) | 0.29598 (10) | 0.06813 (6) | 0.01774 (13) | |
| C1 | 0.28772 (11) | 0.03276 (11) | 0.59073 (7) | 0.01597 (13) | |
| C2 | 0.16321 (11) | −0.12663 (11) | 0.52203 (7) | 0.01882 (15) | |
| H2 | 0.1083 | −0.2049 | 0.5553 | 0.023* | |
| C3 | 0.12131 (11) | −0.16827 (11) | 0.40303 (7) | 0.01830 (14) | |
| H3 | 0.0389 | −0.2780 | 0.3535 | 0.022* | |
| C4 | 0.20033 (11) | −0.04878 (10) | 0.35605 (7) | 0.01519 (13) | |
| C5 | 0.32546 (11) | 0.11108 (11) | 0.42782 (7) | 0.01684 (14) | |
| H5 | 0.3786 | 0.1914 | 0.3952 | 0.020* | |
| C6 | 0.37179 (11) | 0.15206 (11) | 0.54715 (7) | 0.01746 (14) | |
| H6 | 0.4585 | 0.2587 | 0.5973 | 0.021* | |
| C7 | 0.15140 (10) | −0.10129 (11) | 0.22792 (7) | 0.01583 (13) | |
| C8 | 0.17711 (10) | 0.04177 (11) | 0.17269 (7) | 0.01528 (13) | |
| C9 | 0.13320 (12) | 0.20531 (11) | 0.21083 (7) | 0.01856 (15) | |
| H9 | 0.0845 | 0.2303 | 0.2735 | 0.022* | |
| C10 | 0.16116 (12) | 0.33074 (12) | 0.15649 (8) | 0.01980 (15) | |
| H10 | 0.1305 | 0.4423 | 0.1815 | 0.024* | |
| C11 | 0.27066 (12) | 0.13678 (12) | 0.02789 (7) | 0.01927 (15) | |
| H11 | 0.3181 | 0.1145 | −0.0354 | 0.023* | |
| C12 | 0.24204 (12) | 0.00559 (12) | 0.07807 (7) | 0.01801 (14) | |
| H12 | 0.2664 | −0.1079 | 0.0483 | 0.022* | |
| C13 | 0.27377 (13) | 0.43875 (13) | 0.01795 (8) | 0.02376 (17) | |
| H13A | 0.1777 | 0.5026 | 0.0122 | 0.036* | |
| H13B | 0.2839 | 0.3847 | −0.0592 | 0.036* | |
| H13C | 0.3875 | 0.5235 | 0.0676 | 0.036* | |
| Cl1 | 0.70498 (3) | 0.38019 (2) | 0.243705 (16) | 0.01746 (6) | |
| O4 | 0.58098 (11) | 0.28582 (13) | 0.28579 (8) | 0.03593 (19) | |
| O5 | 0.69466 (14) | 0.27089 (12) | 0.12976 (7) | 0.0388 (2) | |
| O6 | 0.66108 (14) | 0.54567 (11) | 0.23798 (8) | 0.0376 (2) | |
| O7 | 0.88363 (10) | 0.41729 (10) | 0.32064 (7) | 0.02936 (16) |
| O1 | 0.0294 (3) | 0.0341 (4) | 0.0188 (3) | 0.0093 (3) | 0.0123 (3) | 0.0115 (3) |
| O2 | 0.0234 (3) | 0.0258 (3) | 0.0179 (3) | 0.0067 (2) | −0.0007 (2) | 0.0054 (2) |
| O3 | 0.0258 (3) | 0.0173 (3) | 0.0178 (3) | 0.0018 (2) | 0.0047 (2) | 0.0028 (2) |
| N1 | 0.0216 (3) | 0.0198 (3) | 0.0142 (3) | 0.0086 (2) | 0.0048 (2) | 0.0068 (2) |
| N2 | 0.0178 (3) | 0.0209 (3) | 0.0143 (3) | 0.0026 (2) | 0.0037 (2) | 0.0078 (2) |
| C1 | 0.0170 (3) | 0.0192 (3) | 0.0127 (3) | 0.0059 (3) | 0.0044 (2) | 0.0059 (3) |
| C2 | 0.0205 (3) | 0.0196 (3) | 0.0166 (3) | 0.0020 (3) | 0.0055 (3) | 0.0081 (3) |
| C3 | 0.0196 (3) | 0.0173 (3) | 0.0159 (3) | 0.0003 (3) | 0.0041 (3) | 0.0056 (3) |
| C4 | 0.0161 (3) | 0.0160 (3) | 0.0135 (3) | 0.0033 (2) | 0.0044 (2) | 0.0052 (2) |
| C5 | 0.0180 (3) | 0.0170 (3) | 0.0150 (3) | 0.0018 (3) | 0.0053 (3) | 0.0055 (3) |
| C6 | 0.0181 (3) | 0.0174 (3) | 0.0151 (3) | 0.0021 (3) | 0.0042 (3) | 0.0045 (3) |
| C7 | 0.0154 (3) | 0.0174 (3) | 0.0144 (3) | 0.0038 (2) | 0.0042 (2) | 0.0052 (3) |
| C8 | 0.0155 (3) | 0.0177 (3) | 0.0125 (3) | 0.0041 (2) | 0.0039 (2) | 0.0049 (2) |
| C9 | 0.0213 (3) | 0.0203 (3) | 0.0183 (3) | 0.0079 (3) | 0.0100 (3) | 0.0076 (3) |
| C10 | 0.0228 (4) | 0.0201 (3) | 0.0193 (4) | 0.0075 (3) | 0.0085 (3) | 0.0077 (3) |
| C11 | 0.0210 (3) | 0.0244 (4) | 0.0129 (3) | 0.0055 (3) | 0.0062 (3) | 0.0061 (3) |
| C12 | 0.0215 (3) | 0.0205 (3) | 0.0122 (3) | 0.0068 (3) | 0.0056 (3) | 0.0041 (3) |
| C13 | 0.0254 (4) | 0.0250 (4) | 0.0209 (4) | 0.0003 (3) | 0.0053 (3) | 0.0124 (3) |
| Cl1 | 0.01988 (9) | 0.01675 (9) | 0.01702 (9) | 0.00538 (6) | 0.00752 (7) | 0.00529 (7) |
| O4 | 0.0248 (3) | 0.0491 (5) | 0.0350 (4) | −0.0025 (3) | 0.0119 (3) | 0.0193 (4) |
| O5 | 0.0544 (5) | 0.0345 (4) | 0.0236 (4) | 0.0117 (4) | 0.0172 (4) | −0.0019 (3) |
| O6 | 0.0580 (6) | 0.0274 (4) | 0.0320 (4) | 0.0249 (4) | 0.0095 (4) | 0.0123 (3) |
| O7 | 0.0185 (3) | 0.0273 (3) | 0.0383 (4) | 0.0036 (2) | 0.0036 (3) | 0.0102 (3) |
| O1—N1 | 1.2280 (10) | C6—H6 | 0.9500 |
| O2—N1 | 1.2260 (10) | C7—C8 | 1.5052 (11) |
| O3—C7 | 1.2191 (10) | C8—C12 | 1.3910 (11) |
| N1—C1 | 1.4655 (10) | C8—C9 | 1.3915 (11) |
| N2—C11 | 1.3466 (11) | C9—C10 | 1.3800 (12) |
| N2—C10 | 1.3487 (11) | C9—H9 | 0.9500 |
| N2—C13 | 1.4803 (11) | C10—H10 | 0.9500 |
| C1—C6 | 1.3855 (11) | C11—C12 | 1.3819 (12) |
| C1—C2 | 1.3858 (11) | C11—H11 | 0.9500 |
| C2—C3 | 1.3885 (11) | C12—H12 | 0.9500 |
| C2—H2 | 0.9500 | C13—H13A | 0.9800 |
| C3—C4 | 1.3988 (11) | C13—H13B | 0.9800 |
| C3—H3 | 0.9500 | C13—H13C | 0.9800 |
| C4—C5 | 1.3984 (11) | Cl1—O4 | 1.4337 (8) |
| C4—C7 | 1.4885 (11) | Cl1—O6 | 1.4340 (8) |
| C5—C6 | 1.3911 (11) | Cl1—O5 | 1.4383 (8) |
| C5—H5 | 0.9500 | Cl1—O7 | 1.4401 (8) |
| O2—N1—O1 | 124.08 (8) | C12—C8—C9 | 119.35 (7) |
| O2—N1—C1 | 118.26 (7) | C12—C8—C7 | 118.31 (7) |
| O1—N1—C1 | 117.66 (7) | C9—C8—C7 | 122.32 (7) |
| C11—N2—C10 | 121.28 (7) | C10—C9—C8 | 119.22 (7) |
| C11—N2—C13 | 119.58 (7) | C10—C9—H9 | 120.4 |
| C10—N2—C13 | 119.09 (8) | C8—C9—H9 | 120.4 |
| C6—C1—C2 | 123.63 (7) | N2—C10—C9 | 120.44 (8) |
| C6—C1—N1 | 118.23 (7) | N2—C10—H10 | 119.8 |
| C2—C1—N1 | 118.14 (7) | C9—C10—H10 | 119.8 |
| C1—C2—C3 | 117.82 (7) | N2—C11—C12 | 120.44 (7) |
| C1—C2—H2 | 121.1 | N2—C11—H11 | 119.8 |
| C3—C2—H2 | 121.1 | C12—C11—H11 | 119.8 |
| C2—C3—C4 | 120.07 (7) | C11—C12—C8 | 119.18 (8) |
| C2—C3—H3 | 120.0 | C11—C12—H12 | 120.4 |
| C4—C3—H3 | 120.0 | C8—C12—H12 | 120.4 |
| C5—C4—C3 | 120.66 (7) | N2—C13—H13A | 109.5 |
| C5—C4—C7 | 121.64 (7) | N2—C13—H13B | 109.5 |
| C3—C4—C7 | 117.66 (7) | H13A—C13—H13B | 109.5 |
| C6—C5—C4 | 119.76 (7) | N2—C13—H13C | 109.5 |
| C6—C5—H5 | 120.1 | H13A—C13—H13C | 109.5 |
| C4—C5—H5 | 120.1 | H13B—C13—H13C | 109.5 |
| C1—C6—C5 | 118.03 (7) | O4—Cl1—O6 | 110.12 (6) |
| C1—C6—H6 | 121.0 | O4—Cl1—O5 | 109.24 (6) |
| C5—C6—H6 | 121.0 | O6—Cl1—O5 | 108.89 (6) |
| O3—C7—C4 | 121.94 (7) | O4—Cl1—O7 | 109.05 (5) |
| O3—C7—C8 | 118.68 (7) | O6—Cl1—O7 | 109.59 (5) |
| C4—C7—C8 | 119.37 (7) | O5—Cl1—O7 | 109.94 (5) |
| O2—N1—C1—C6 | −36.02 (11) | C5—C4—C7—C8 | −23.70 (11) |
| O1—N1—C1—C6 | 143.63 (8) | C3—C4—C7—C8 | 158.50 (8) |
| O2—N1—C1—C2 | 144.34 (8) | O3—C7—C8—C12 | −39.66 (11) |
| O1—N1—C1—C2 | −36.01 (11) | C4—C7—C8—C12 | 139.93 (8) |
| C6—C1—C2—C3 | 0.10 (13) | O3—C7—C8—C9 | 138.36 (9) |
| N1—C1—C2—C3 | 179.72 (7) | C4—C7—C8—C9 | −42.06 (11) |
| C1—C2—C3—C4 | −1.68 (13) | C12—C8—C9—C10 | −2.33 (13) |
| C2—C3—C4—C5 | 1.70 (13) | C7—C8—C9—C10 | 179.68 (8) |
| C2—C3—C4—C7 | 179.52 (8) | C11—N2—C10—C9 | 2.39 (13) |
| C3—C4—C5—C6 | −0.10 (13) | C13—N2—C10—C9 | −175.05 (8) |
| C7—C4—C5—C6 | −177.83 (7) | C8—C9—C10—N2 | −0.59 (13) |
| C2—C1—C6—C5 | 1.46 (13) | C10—N2—C11—C12 | −1.20 (13) |
| N1—C1—C6—C5 | −178.16 (7) | C13—N2—C11—C12 | 176.23 (8) |
| C4—C5—C6—C1 | −1.43 (12) | N2—C11—C12—C8 | −1.75 (13) |
| C5—C4—C7—O3 | 155.88 (8) | C9—C8—C12—C11 | 3.47 (12) |
| C3—C4—C7—O3 | −21.92 (12) | C7—C8—C12—C11 | −178.45 (7) |
| H··· | ||||
| C2—H2···O7i | 0.95 | 2.60 | 3.478 (1) | 153. |
| C3—H3···O7ii | 0.95 | 2.42 | 3.277 (1) | 150. |
| C5—H5···O4 | 0.95 | 2.51 | 3.394 (1) | 154. |
| C9—H9···O7iii | 0.95 | 2.42 | 3.132 (1) | 132. |
| C10—H10···O3iv | 0.95 | 2.52 | 3.392 (1) | 153. |
| C11—H11···O1v | 0.95 | 2.43 | 3.200 (1) | 138. |
| C12—H12···O5vi | 0.95 | 2.39 | 3.134 (1) | 135. |
| C13—H13A···O3iv | 0.98 | 2.63 | 3.373 (1) | 133. |
| C13—H13B···O6vii | 0.98 | 2.59 | 3.429 (1) | 144. |
| C13—H13C···O2viii | 0.98 | 2.63 | 3.446 (1) | 141. |
| C13—H13C···O6 | 0.98 | 2.60 | 3.402 (1) | 139. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C2—H2⋯O7i | 0.95 | 2.60 | 3.478 (1) | 153 |
| C3—H3⋯O7ii | 0.95 | 2.42 | 3.277 (1) | 150 |
| C5—H5⋯O4 | 0.95 | 2.51 | 3.394 (1) | 154 |
| C9—H9⋯O7iii | 0.95 | 2.42 | 3.132 (1) | 132 |
| C10—H10⋯O3iv | 0.95 | 2.52 | 3.392 (1) | 153 |
| C11—H11⋯O1v | 0.95 | 2.43 | 3.200 (1) | 138 |
| C12—H12⋯O5vi | 0.95 | 2.39 | 3.134 (1) | 135 |
| C13—H13 | 0.98 | 2.63 | 3.373 (1) | 133 |
| C13—H13 | 0.98 | 2.59 | 3.429 (1) | 144 |
| C13—H13 | 0.98 | 2.63 | 3.446 (1) | 141 |
| C13—H13 | 0.98 | 2.60 | 3.402 (1) | 139 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .