Literature DB >> 22059057

2-(5,6-Dihydro-benzimidazo[1,2-c]quinazolin-6-yl)-6-eth-oxy-phenol.

Naser Eltaher Eltayeb, Siang Guan Teoh, Kong Mun Lo.   

Abstract

In the title compound, C(22)H(19)N(3)O(2), the phenol ring forms dihedral angles of 88.93 (10) and 87.95 (12)° with the benzimidazole system and the quinazoline benzene ring, respectively. In the crystal, mol-ecules are linked via O-H⋯N hydrogen bonds into infinite chains along [100]. An intra-molecular N-H⋯O hydrogen bond generates an S(6) ring.

Entities:  

Year:  2011        PMID: 22059057      PMCID: PMC3200659          DOI: 10.1107/S1600536811034714

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, references to our previous structural studies of similar compounds and background references to benzimidazoles, see: Eltayeb et al. (2011 ▶).

Experimental

Crystal data

C22H19N3O2 M = 357.40 Triclinic, a = 8.6935 (3) Å b = 10.9167 (3) Å c = 11.3401 (5) Å α = 107.193 (2)° β = 108.923 (2)° γ = 104.723 (2)° V = 896.66 (6) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.25 × 0.2 × 0.17 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.614, T max = 0.746 7367 measured reflections 3505 independent reflections 2804 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.164 S = 1.00 3505 reflections 250 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.73 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811034714/hb6367sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034714/hb6367Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811034714/hb6367Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H19N3O2Z = 2
Mr = 357.40F(000) = 376
Triclinic, P1Dx = 1.324 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.6935 (3) ÅCell parameters from 2997 reflections
b = 10.9167 (3) Åθ = 2.6–28.3°
c = 11.3401 (5) ŵ = 0.09 mm1
α = 107.193 (2)°T = 296 K
β = 108.923 (2)°Block, yellow
γ = 104.723 (2)°0.25 × 0.2 × 0.17 mm
V = 896.66 (6) Å3
Bruker SMART APEXII CCD diffractometer3505 independent reflections
Radiation source: fine-focus sealed tube2804 reflections with I > 2σ(I)
graphiteRint = 0.022
φ and ω scansθmax = 26.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→10
Tmin = 0.614, Tmax = 0.746k = −13→13
7367 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.164H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.0842P)2 + 1.0545P] where P = (Fo2 + 2Fc2)/3
3505 reflections(Δ/σ)max < 0.001
250 parametersΔρmax = 0.73 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O20.2462 (2)0.30314 (16)0.30490 (16)0.0186 (4)
O10.3194 (2)0.36858 (17)0.10937 (16)0.0198 (4)
H1O10.24990.39740.13120.030*
N20.5360 (3)0.3168 (2)−0.0210 (2)0.0212 (4)
N30.8203 (3)0.4820 (2)0.1277 (2)0.0199 (4)
C220.0082 (3)0.1800 (3)0.3379 (3)0.0300 (6)
H22A−0.04270.24630.32580.045*
H22B−0.02370.14610.39920.045*
H22C−0.03500.10370.25100.045*
C210.2056 (3)0.2487 (2)0.3970 (2)0.0207 (5)
H21A0.25140.32320.48690.025*
H21B0.25840.18160.40590.025*
C170.4186 (3)0.3471 (2)0.3259 (2)0.0159 (5)
C160.4501 (3)0.3791 (2)0.2227 (2)0.0156 (5)
C150.6199 (3)0.4154 (2)0.2305 (2)0.0158 (5)
C140.6409 (3)0.4416 (2)0.1107 (2)0.0177 (5)
H140.60120.51630.10250.021*
C130.6001 (3)0.2101 (2)−0.0438 (2)0.0196 (5)
C80.7844 (3)0.2458 (2)0.0104 (2)0.0210 (5)
C90.8501 (3)0.1412 (3)−0.0197 (3)0.0235 (5)
H90.97120.16370.01560.028*
C100.7343 (3)0.0051 (2)−0.1018 (3)0.0264 (6)
H100.7770−0.0647−0.12120.032*
C180.5574 (3)0.3556 (2)0.4365 (2)0.0181 (5)
H180.53710.33640.50600.022*
C190.7260 (3)0.3924 (2)0.4435 (2)0.0193 (5)
H190.81830.39780.51770.023*
C200.7578 (3)0.4213 (2)0.3406 (2)0.0184 (5)
H200.87070.44440.34490.022*
C110.5555 (3)−0.0273 (3)−0.1549 (3)0.0276 (6)
H110.4786−0.1194−0.21060.033*
C120.4880 (3)0.0721 (2)−0.1280 (2)0.0243 (5)
H120.36650.0474−0.16610.029*
C70.8974 (3)0.3931 (2)0.0916 (2)0.0193 (5)
N11.0679 (3)0.4543 (2)0.1332 (2)0.0214 (4)
C61.1063 (3)0.5952 (2)0.2058 (2)0.0202 (5)
C51.2674 (3)0.7073 (3)0.2714 (2)0.0228 (5)
H51.36910.69580.26950.027*
C41.2708 (3)0.8375 (3)0.3399 (3)0.0312 (6)
H41.37670.91470.38550.037*
C31.1143 (4)0.8535 (3)0.3410 (3)0.0303 (6)
H31.11970.94110.38900.036*
C20.9543 (3)0.7420 (3)0.2726 (3)0.0257 (5)
H20.85100.75230.27170.031*
C10.9549 (3)0.6149 (2)0.2056 (2)0.0222 (5)
H1N20.409 (4)0.280 (3)−0.035 (3)0.043 (9)*
U11U22U33U12U13U23
O20.0157 (8)0.0213 (8)0.0235 (8)0.0083 (6)0.0111 (7)0.0116 (7)
O10.0160 (8)0.0301 (9)0.0206 (8)0.0148 (7)0.0098 (7)0.0129 (7)
N20.0169 (10)0.0223 (10)0.0212 (10)0.0076 (8)0.0073 (8)0.0062 (8)
N30.0174 (10)0.0228 (10)0.0222 (10)0.0087 (8)0.0097 (8)0.0110 (8)
C220.0255 (13)0.0367 (15)0.0420 (15)0.0142 (11)0.0213 (12)0.0250 (12)
C210.0246 (12)0.0199 (11)0.0237 (12)0.0095 (9)0.0141 (10)0.0117 (9)
C170.0167 (11)0.0114 (10)0.0186 (11)0.0066 (8)0.0074 (9)0.0040 (8)
C160.0178 (11)0.0137 (10)0.0162 (11)0.0091 (8)0.0067 (9)0.0056 (8)
C150.0173 (11)0.0134 (10)0.0181 (11)0.0076 (8)0.0079 (9)0.0065 (8)
C140.0164 (11)0.0216 (11)0.0226 (11)0.0121 (9)0.0107 (9)0.0122 (9)
C130.0242 (12)0.0247 (12)0.0168 (11)0.0144 (10)0.0113 (10)0.0106 (9)
C80.0279 (13)0.0161 (11)0.0140 (10)0.0047 (9)0.0066 (10)0.0061 (9)
C90.0192 (12)0.0267 (12)0.0294 (13)0.0120 (10)0.0109 (10)0.0147 (10)
C100.0370 (15)0.0177 (12)0.0274 (13)0.0126 (10)0.0168 (11)0.0081 (10)
C180.0211 (11)0.0158 (10)0.0169 (11)0.0057 (9)0.0081 (9)0.0072 (9)
C190.0161 (11)0.0187 (11)0.0167 (11)0.0052 (9)0.0014 (9)0.0066 (9)
C200.0134 (11)0.0182 (11)0.0211 (11)0.0061 (9)0.0059 (9)0.0066 (9)
C110.0325 (14)0.0195 (12)0.0263 (13)0.0055 (10)0.0127 (11)0.0073 (10)
C120.0203 (12)0.0244 (12)0.0220 (12)0.0026 (10)0.0094 (10)0.0063 (10)
C70.0198 (11)0.0271 (12)0.0178 (11)0.0139 (10)0.0095 (9)0.0125 (10)
N10.0182 (10)0.0255 (10)0.0226 (10)0.0091 (8)0.0087 (8)0.0125 (8)
C60.0217 (12)0.0210 (11)0.0152 (11)0.0044 (9)0.0048 (9)0.0107 (9)
C50.0185 (12)0.0310 (13)0.0195 (11)0.0085 (10)0.0064 (9)0.0142 (10)
C40.0291 (14)0.0238 (13)0.0233 (12)−0.0064 (10)0.0030 (11)0.0107 (10)
C30.0426 (16)0.0178 (12)0.0272 (13)0.0100 (11)0.0131 (12)0.0085 (10)
C20.0251 (13)0.0269 (13)0.0275 (13)0.0097 (10)0.0119 (11)0.0138 (11)
C10.0215 (12)0.0228 (12)0.0202 (11)0.0040 (9)0.0068 (10)0.0126 (10)
O2—C171.367 (3)C8—C71.461 (3)
O2—C211.438 (3)C9—C101.379 (3)
O1—C161.362 (3)C9—H90.9300
O1—H1O10.8200C10—C111.375 (4)
N2—C131.407 (3)C10—H100.9300
N2—C141.483 (3)C18—C191.386 (3)
N2—H1N21.02 (3)C18—H180.9300
N3—C71.354 (3)C19—C201.386 (3)
N3—C11.401 (3)C19—H190.9300
N3—C141.439 (3)C20—H200.9300
C22—C211.503 (3)C11—C121.364 (4)
C22—H22A0.9600C11—H110.9300
C22—H22B0.9600C12—H120.9300
C22—H22C0.9600C7—N11.312 (3)
C21—H21A0.9700N1—C61.403 (3)
C21—H21B0.9700C6—C11.385 (3)
C17—C181.389 (3)C6—C51.389 (3)
C17—C161.402 (3)C5—C41.391 (4)
C16—C151.394 (3)C5—H50.9300
C15—C201.394 (3)C4—C31.419 (4)
C15—C141.524 (3)C4—H40.9300
C14—H140.9800C3—C21.378 (4)
C13—C121.390 (3)C3—H30.9300
C13—C81.414 (3)C2—C11.373 (4)
C8—C91.404 (3)C2—H20.9300
C17—O2—C21116.69 (17)C10—C9—H9120.2
C16—O1—H1O1109.5C8—C9—H9120.2
C13—N2—C14117.46 (18)C11—C10—C9119.9 (2)
C13—N2—H1N2111.6 (18)C11—C10—H10120.0
C14—N2—H1N2109.0 (18)C9—C10—H10120.0
C7—N3—C1106.87 (19)C19—C18—C17120.2 (2)
C7—N3—C14125.18 (19)C19—C18—H18119.9
C1—N3—C14126.96 (19)C17—C18—H18119.9
C21—C22—H22A109.5C20—C19—C18120.4 (2)
C21—C22—H22B109.5C20—C19—H19119.8
H22A—C22—H22B109.5C18—C19—H19119.8
C21—C22—H22C109.5C19—C20—C15119.7 (2)
H22A—C22—H22C109.5C19—C20—H20120.1
H22B—C22—H22C109.5C15—C20—H20120.1
O2—C21—C22107.31 (19)C12—C11—C10121.7 (2)
O2—C21—H21A110.3C12—C11—H11119.2
C22—C21—H21A110.3C10—C11—H11119.2
O2—C21—H21B110.3C11—C12—C13120.2 (2)
C22—C21—H21B110.3C11—C12—H12119.9
H21A—C21—H21B108.5C13—C12—H12119.9
O2—C17—C18124.7 (2)N1—C7—N3113.7 (2)
O2—C17—C16115.40 (19)N1—C7—C8128.5 (2)
C18—C17—C16119.8 (2)N3—C7—C8117.8 (2)
O1—C16—C15117.52 (19)C7—N1—C6104.17 (19)
O1—C16—C17122.89 (19)C1—C6—C5120.5 (2)
C15—C16—C17119.5 (2)C1—C6—N1110.7 (2)
C20—C15—C16120.3 (2)C5—C6—N1128.8 (2)
C20—C15—C14123.6 (2)C6—C5—C4117.4 (2)
C16—C15—C14116.07 (19)C6—C5—H5121.3
N3—C14—N2105.89 (17)C4—C5—H5121.3
N3—C14—C15112.84 (18)C5—C4—C3120.6 (2)
N2—C14—C15112.62 (18)C5—C4—H4119.7
N3—C14—H14108.4C3—C4—H4119.7
N2—C14—H14108.4C2—C3—C4121.4 (2)
C15—C14—H14108.4C2—C3—H3119.3
C12—C13—N2121.8 (2)C4—C3—H3119.3
C12—C13—C8118.9 (2)C1—C2—C3116.7 (2)
N2—C13—C8119.0 (2)C1—C2—H2121.7
C9—C8—C13119.6 (2)C3—C2—H2121.7
C9—C8—C7123.3 (2)C2—C1—C6123.3 (2)
C13—C8—C7117.1 (2)C2—C1—N3132.2 (2)
C10—C9—C8119.7 (2)C6—C1—N3104.5 (2)
C17—O2—C21—C22−168.25 (19)C16—C15—C20—C19−0.8 (3)
C21—O2—C17—C18−6.7 (3)C14—C15—C20—C19−178.3 (2)
C21—O2—C17—C16170.40 (18)C9—C10—C11—C12−0.4 (4)
O2—C17—C16—O10.5 (3)C10—C11—C12—C13−0.7 (4)
C18—C17—C16—O1177.77 (19)N2—C13—C12—C11175.7 (2)
O2—C17—C16—C15−175.55 (18)C8—C13—C12—C111.5 (4)
C18—C17—C16—C151.7 (3)C1—N3—C7—N1−2.4 (3)
O1—C16—C15—C20−176.86 (19)C14—N3—C7—N1−171.7 (2)
C17—C16—C15—C20−0.6 (3)C1—N3—C7—C8179.14 (19)
O1—C16—C15—C140.8 (3)C14—N3—C7—C89.9 (3)
C17—C16—C15—C14177.08 (18)C9—C8—C7—N19.6 (4)
C7—N3—C14—N2−37.3 (3)C13—C8—C7—N1−167.8 (2)
C1—N3—C14—N2155.6 (2)C9—C8—C7—N3−172.1 (2)
C7—N3—C14—C1586.4 (3)C13—C8—C7—N310.4 (3)
C1—N3—C14—C15−80.8 (3)N3—C7—N1—C61.5 (3)
C13—N2—C14—N348.0 (3)C8—C7—N1—C6179.8 (2)
C13—N2—C14—C15−75.8 (2)C7—N1—C6—C10.0 (3)
C20—C15—C14—N3−3.9 (3)C7—N1—C6—C5−179.5 (2)
C16—C15—C14—N3178.50 (18)C1—C6—C5—C42.3 (3)
C20—C15—C14—N2115.9 (2)N1—C6—C5—C4−178.3 (2)
C16—C15—C14—N2−61.7 (2)C6—C5—C4—C3−0.5 (4)
C14—N2—C13—C12152.2 (2)C5—C4—C3—C2−1.2 (4)
C14—N2—C13—C8−33.6 (3)C4—C3—C2—C11.1 (4)
C12—C13—C8—C9−1.2 (3)C3—C2—C1—C60.8 (4)
N2—C13—C8—C9−175.5 (2)C3—C2—C1—N3179.8 (2)
C12—C13—C8—C7176.4 (2)C5—C6—C1—C2−2.5 (4)
N2—C13—C8—C72.0 (3)N1—C6—C1—C2177.9 (2)
C13—C8—C9—C100.1 (4)C5—C6—C1—N3178.2 (2)
C7—C8—C9—C10−177.3 (2)N1—C6—C1—N3−1.4 (2)
C8—C9—C10—C110.7 (4)C7—N3—C1—C2−177.0 (3)
O2—C17—C18—C19175.5 (2)C14—N3—C1—C2−8.0 (4)
C16—C17—C18—C19−1.5 (3)C7—N3—C1—C62.2 (2)
C17—C18—C19—C200.1 (3)C14—N3—C1—C6171.2 (2)
C18—C19—C20—C151.1 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1O1···N1i0.821.852.646 (3)165
N2—H1N2···O11.01 (4)2.12 (3)2.811 (3)124 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O1⋯N1i0.821.852.646 (3)165
N2—H1N2⋯O11.01 (4)2.12 (3)2.811 (3)124 (2)

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-(5,6-Dihydro-benzimidazo[1,2-c]quinazolin-6-yl)phenol.

Authors:  Naser Eltaher Eltayeb; Siang Guan Teoh; Ching Kheng Quah; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-06

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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