Literature DB >> 22059055

2-(1-Adamant-yl)-1-(3-amino-phen-yl)ethanol.

Michal Rouchal, Zuzana Kozubková, Marek Nečas, Robert Vícha.   

Abstract

In the crystal structure of the title compound, C(18)H(25)NO, mol-ecules are linked via O-H⋯N hydrogen bonds, forming chains parallel to the c axis. Additional weak N-H⋯O inter-actions stabilize the crystal packing. The adamantane cage consists of three fused cyclo-hexane rings in almost ideal chair conformations, with C-C-C angles in the range 107.9 (10)-111.3 (11)°.

Entities:  

Year:  2011        PMID: 22059055      PMCID: PMC3200880          DOI: 10.1107/S1600536811034763

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of adamantane-bearing compounds, see: van der Schyf & Geldenhuys (2009) ▶. For related structures, see: Rouchal et al. (2009 ▶, 2010 ▶).

Experimental

Crystal data

C18H25NO M = 271.39 Orthorhombic, a = 16.4467 (7) Å b = 22.1873 (9) Å c = 8.1033 (4) Å V = 2957.0 (2) Å3 Z = 8 Mo Kα radiation μ = 0.07 mm−1 T = 120 K 0.30 × 0.20 × 0.10 mm

Data collection

Kuma KM-4 CCD diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.984, T max = 1.000 30937 measured reflections 2602 independent reflections 1716 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.068 S = 0.85 2602 reflections 190 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.15 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811034763/pk2344sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034763/pk2344Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811034763/pk2344Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H25NODx = 1.219 Mg m3
Mr = 271.39Melting point: 417 K
Orthorhombic, PccnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ab 2acCell parameters from 6715 reflections
a = 16.4467 (7) Åθ = 2.9–27.3°
b = 22.1873 (9) ŵ = 0.07 mm1
c = 8.1033 (4) ÅT = 120 K
V = 2957.0 (2) Å3Block, colourless
Z = 80.30 × 0.20 × 0.10 mm
F(000) = 1184
Kuma KM-4 CCD diffractometer2602 independent reflections
Radiation source: fine-focus sealed tube1716 reflections with I > 2σ(I)
graphiteRint = 0.053
Detector resolution: 0.06 pixels mm-1θmax = 25.0°, θmin = 3.0°
ω scansh = −18→19
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)k = −26→26
Tmin = 0.984, Tmax = 1.000l = −8→9
30937 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.068H atoms treated by a mixture of independent and constrained refinement
S = 0.85w = 1/[σ2(Fo2) + (0.0369P)2] where P = (Fo2 + 2Fc2)/3
2602 reflections(Δ/σ)max = 0.001
190 parametersΔρmax = 0.14 e Å3
0 restraintsΔρmin = −0.15 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.36193 (5)0.68130 (4)0.21617 (11)0.0266 (2)
H1A0.31390.68100.25130.040*
N10.30745 (7)0.68654 (6)0.83127 (16)0.0257 (3)
C10.54376 (8)0.63700 (5)0.11634 (15)0.0185 (3)
C20.53840 (8)0.57371 (6)0.04034 (16)0.0240 (3)
H2A0.55600.54340.12270.029*
H2B0.48130.56490.01020.029*
C30.59193 (8)0.56895 (6)−0.11291 (17)0.0271 (4)
H30.58750.5274−0.15990.033*
C40.68033 (8)0.58181 (6)−0.06886 (18)0.0290 (4)
H4A0.69980.55190.01270.035*
H4B0.71470.5785−0.16880.035*
C50.68711 (8)0.64514 (6)0.00313 (17)0.0258 (3)
H50.74500.65360.03320.031*
C60.65776 (8)0.69158 (6)−0.12231 (18)0.0281 (4)
H6A0.69230.6900−0.22220.034*
H6B0.66190.7326−0.07460.034*
C70.56932 (8)0.67818 (6)−0.16850 (17)0.0254 (3)
H70.55030.7082−0.25190.030*
C80.51604 (8)0.68229 (6)−0.01404 (15)0.0228 (3)
H8A0.51910.72360.03190.027*
H8B0.45870.6741−0.04400.027*
C90.56360 (8)0.61470 (6)−0.24141 (16)0.0282 (4)
H9A0.50670.6060−0.27370.034*
H9B0.59810.6118−0.34120.034*
C100.63360 (8)0.64953 (6)0.15736 (17)0.0242 (3)
H10A0.63870.69040.20560.029*
H10B0.65270.62010.24050.029*
C110.49559 (8)0.64112 (6)0.27851 (16)0.0226 (3)
H11A0.52050.61250.35740.027*
H11B0.50390.68210.32380.027*
C120.40426 (8)0.62906 (6)0.27706 (16)0.0221 (3)
H120.39320.59450.20090.027*
C130.37566 (8)0.61198 (6)0.44839 (16)0.0197 (3)
C140.35838 (7)0.65598 (6)0.56444 (16)0.0199 (3)
H140.36450.69720.53560.024*
C150.33224 (7)0.64093 (6)0.72247 (17)0.0209 (3)
C160.32485 (8)0.58040 (6)0.76474 (17)0.0250 (3)
H160.30710.56940.87210.030*
C170.34335 (8)0.53647 (6)0.65039 (18)0.0277 (4)
H170.33900.49520.68040.033*
C180.36811 (8)0.55162 (6)0.49282 (17)0.0259 (3)
H180.38000.52090.41490.031*
H1B0.3144 (9)0.6768 (6)0.942 (2)0.045 (5)*
H1C0.3315 (8)0.7235 (7)0.8081 (17)0.033 (4)*
U11U22U33U12U13U23
O10.0216 (5)0.0341 (5)0.0241 (6)0.0052 (4)0.0027 (5)0.0062 (5)
N10.0280 (7)0.0324 (8)0.0166 (8)0.0026 (6)0.0010 (6)0.0003 (6)
C10.0189 (8)0.0208 (7)0.0158 (8)0.0003 (6)0.0010 (6)−0.0002 (6)
C20.0250 (8)0.0223 (7)0.0247 (8)−0.0017 (6)0.0019 (6)0.0005 (6)
C30.0303 (8)0.0224 (7)0.0286 (9)−0.0005 (6)0.0046 (7)−0.0073 (7)
C40.0272 (9)0.0322 (8)0.0276 (9)0.0082 (6)0.0086 (7)0.0036 (7)
C50.0160 (7)0.0359 (8)0.0257 (9)−0.0040 (6)−0.0009 (6)0.0016 (7)
C60.0296 (9)0.0280 (8)0.0268 (9)−0.0056 (6)0.0071 (7)0.0018 (7)
C70.0270 (8)0.0281 (8)0.0210 (8)0.0034 (6)0.0015 (6)0.0073 (7)
C80.0212 (7)0.0241 (7)0.0230 (8)0.0027 (6)−0.0003 (6)0.0011 (6)
C90.0255 (8)0.0403 (9)0.0188 (8)−0.0011 (7)0.0026 (7)−0.0045 (7)
C100.0239 (8)0.0267 (8)0.0221 (8)0.0004 (6)−0.0040 (7)0.0005 (6)
C110.0252 (8)0.0241 (7)0.0185 (8)−0.0008 (6)−0.0023 (6)0.0001 (6)
C120.0229 (8)0.0232 (7)0.0202 (8)0.0023 (6)0.0005 (7)−0.0006 (6)
C130.0157 (7)0.0256 (7)0.0177 (8)−0.0003 (6)−0.0007 (6)0.0008 (6)
C140.0174 (7)0.0217 (7)0.0206 (8)−0.0004 (6)−0.0006 (6)0.0044 (6)
C150.0153 (7)0.0291 (8)0.0182 (8)0.0010 (6)−0.0018 (6)0.0001 (6)
C160.0214 (8)0.0331 (8)0.0205 (9)−0.0026 (6)0.0009 (6)0.0081 (7)
C170.0279 (9)0.0239 (8)0.0315 (10)−0.0037 (6)−0.0023 (7)0.0070 (7)
C180.0277 (8)0.0244 (7)0.0255 (9)0.0005 (6)−0.0004 (7)−0.0022 (7)
O1—C121.4393 (14)C7—C91.5302 (18)
O1—H1A0.8400C7—C81.5305 (17)
N1—C151.4027 (17)C7—H71.0000
N1—H1C0.930 (14)C8—H8A0.9900
N1—H1B0.934 (16)C8—H8B0.9900
C1—C81.5277 (16)C9—H9A0.9900
C1—C21.5360 (16)C9—H9B0.9900
C1—C111.5373 (17)C10—H10A0.9900
C1—C101.5397 (18)C10—H10B0.9900
C2—C31.5258 (17)C11—C121.5257 (18)
C2—H2A0.9900C11—H11A0.9900
C2—H2B0.9900C11—H11B0.9900
C3—C41.5240 (18)C12—C131.5141 (17)
C3—C91.5271 (18)C12—H121.0000
C3—H31.0000C13—C141.3850 (17)
C4—C51.5254 (18)C13—C181.3923 (17)
C4—H4A0.9900C14—C151.3915 (18)
C4—H4B0.9900C14—H140.9500
C5—C61.5258 (18)C15—C161.3912 (17)
C5—C101.5317 (18)C16—C171.3789 (19)
C5—H51.0000C16—H160.9500
C6—C71.5311 (18)C17—C181.3817 (18)
C6—H6A0.9900C17—H170.9500
C6—H6B0.9900C18—H180.9500
C12—O1—H1A109.5C1—C8—H8A109.5
C15—N1—H1C112.7 (9)C7—C8—H8A109.5
C15—N1—H1B113.8 (9)C1—C8—H8B109.5
H1C—N1—H1B110.3 (13)C7—C8—H8B109.5
C8—C1—C2107.88 (10)H8A—C8—H8B108.1
C8—C1—C11113.47 (10)C3—C9—C7109.26 (11)
C2—C1—C11111.57 (10)C3—C9—H9A109.8
C8—C1—C10108.48 (10)C7—C9—H9A109.8
C2—C1—C10107.86 (10)C3—C9—H9B109.8
C11—C1—C10107.42 (10)C7—C9—H9B109.8
C3—C2—C1110.89 (10)H9A—C9—H9B108.3
C3—C2—H2A109.5C5—C10—C1111.33 (11)
C1—C2—H2A109.5C5—C10—H10A109.4
C3—C2—H2B109.5C1—C10—H10A109.4
C1—C2—H2B109.5C5—C10—H10B109.4
H2A—C2—H2B108.1C1—C10—H10B109.4
C2—C3—C4110.29 (11)H10A—C10—H10B108.0
C2—C3—C9109.45 (11)C12—C11—C1119.36 (11)
C4—C3—C9109.04 (11)C12—C11—H11A107.5
C2—C3—H3109.3C1—C11—H11A107.5
C4—C3—H3109.3C12—C11—H11B107.5
C9—C3—H3109.3C1—C11—H11B107.5
C5—C4—C3109.38 (11)H11A—C11—H11B107.0
C5—C4—H4A109.8O1—C12—C13111.45 (10)
C3—C4—H4A109.8O1—C12—C11109.72 (10)
C5—C4—H4B109.8C13—C12—C11110.04 (11)
C3—C4—H4B109.8O1—C12—H12108.5
H4A—C4—H4B108.2C13—C12—H12108.5
C6—C5—C4110.13 (11)C11—C12—H12108.5
C6—C5—C10108.59 (11)C14—C13—C18118.96 (12)
C4—C5—C10109.19 (11)C14—C13—C12120.66 (11)
C6—C5—H5109.6C18—C13—C12120.37 (12)
C4—C5—H5109.6C13—C14—C15121.27 (12)
C10—C5—H5109.6C13—C14—H14119.4
C5—C6—C7109.41 (11)C15—C14—H14119.4
C5—C6—H6A109.8C14—C15—C16119.03 (12)
C7—C6—H6A109.8C14—C15—N1119.67 (12)
C5—C6—H6B109.8C16—C15—N1121.08 (13)
C7—C6—H6B109.8C17—C16—C15119.84 (13)
H6A—C6—H6B108.2C17—C16—H16120.1
C6—C7—C9109.36 (11)C15—C16—H16120.1
C6—C7—C8109.41 (11)C16—C17—C18120.94 (13)
C9—C7—C8109.60 (10)C16—C17—H17119.5
C6—C7—H7109.5C18—C17—H17119.5
C9—C7—H7109.5C17—C18—C13119.95 (13)
C8—C7—H7109.5C17—C18—H18120.0
C1—C8—C7110.82 (10)C13—C18—H18120.0
D—H···AD—HH···AD···AD—H···A
O1—H1A···N1i0.842.102.9400 (14)176.
N1—H1C···O1ii0.930 (15)2.295 (15)3.2048 (16)166.0 (13)
N1—H1B···O1iii0.930 (16)2.357 (16)3.2472 (16)160.1 (14)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯N1i0.842.102.9400 (14)176
N1—H1C⋯O1ii0.930 (15)2.295 (15)3.2048 (16)166.0 (13)
N1—H1B⋯O1iii0.930 (16)2.357 (16)3.2472 (16)160.1 (14)

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Polycyclic compounds: ideal drug scaffolds for the design of multiple mechanism drugs?

Authors:  Cornelis J Van der Schyf; Werner J Geldenhuys
Journal:  Neurotherapeutics       Date:  2009-01       Impact factor: 7.620

3.  (1-Adamant-yl)(4-amino-phen-yl)methanol.

Authors:  Michal Rouchal; Marek Nečas; Robert Vícha
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-10

4.  1-(2-Phenyl-eth-yl)adamantane.

Authors:  Michal Rouchal; Marek Nečas; Robert Vícha
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-23
  4 in total
  1 in total

1.  (1-Adamant-yl)(3-amino-phen-yl)methanone.

Authors:  Michal Rouchal; Marek Nečas; Robert Vícha
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-05
  1 in total

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