Literature DB >> 22059037

3-[3-Methyl-4-(3-nitro-benzyl-idene-amino)-5-sulfanyl-idene-4,5-dihydro-1H-1,2,4-triazol-1-yl]-1,3-diphenyl-propan-1-one.

Yan Gao1, Yan Dong.   

Abstract

In the title mol-ecule, C(25)H(21)N(5)O(3)S, the triazole ring forms dihedral angles of 21.4 (2), 61.4 (2) and 102.4 (2)° with the nitro-phenyl and two phenyl rings, respectively. In the crystal, weak C-H⋯O hydrogen bonds and π-π inter-actions between the benzene rings from neighbouring mol-ecules [with a centroid-centroid distance of 3.571 (3) Å] consolidate the crystal packing.

Entities:  

Year:  2011        PMID: 22059037      PMCID: PMC3200841          DOI: 10.1107/S1600536811033587

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of related 1,2,4-triazole-5(4H)-thione derivatives, see: Al-Tamimi et al. (2010 ▶); Fun et al. (2009 ▶); Gao et al. (2011 ▶); Tan et al. (2010 ▶); Wang et al. (2011 ▶); Zhao et al. (2010 ▶).

Experimental

Crystal data

C25H21N5O3S M = 471.53 Triclinic, a = 9.0991 (10) Å b = 11.8026 (15) Å c = 12.0649 (16) Å α = 70.92 (1)° β = 73.042 (12)° γ = 85.883 (13)° V = 1170.9 (3) Å3 Z = 2 Mo Kα radiation μ = 0.18 mm−1 T = 113 K 0.20 × 0.18 × 0.10 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.966, T max = 0.983 15096 measured reflections 5553 independent reflections 3889 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.090 S = 0.98 5553 reflections 308 parameters H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033587/cv5140sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033587/cv5140Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811033587/cv5140Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H21N5O3SZ = 2
Mr = 471.53F(000) = 492
Triclinic, P1Dx = 1.337 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.0991 (10) ÅCell parameters from 4043 reflections
b = 11.8026 (15) Åθ = 1.8–27.9°
c = 12.0649 (16) ŵ = 0.18 mm1
α = 70.92 (1)°T = 113 K
β = 73.042 (12)°Prism, colourless
γ = 85.883 (13)°0.20 × 0.18 × 0.10 mm
V = 1170.9 (3) Å3
Rigaku Saturn CCD area-detector diffractometer5553 independent reflections
Radiation source: rotating anode3889 reflections with I > 2σ(I)
multilayerRint = 0.031
Detector resolution: 14.63 pixels mm-1θmax = 27.9°, θmin = 1.8°
φ and ω scansh = −11→11
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −15→15
Tmin = 0.966, Tmax = 0.983l = −15→15
15096 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0481P)2] where P = (Fo2 + 2Fc2)/3
5553 reflections(Δ/σ)max < 0.001
308 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.02806 (4)0.24483 (3)0.15884 (3)0.02334 (9)
O10.13544 (9)0.55093 (8)0.09394 (7)0.0220 (2)
O20.60961 (13)−0.14734 (11)0.22384 (10)0.0532 (3)
O30.68162 (11)−0.25204 (9)0.38191 (9)0.0387 (3)
N1−0.10804 (11)0.39532 (8)0.28523 (8)0.0151 (2)
N2−0.13256 (11)0.41445 (9)0.39629 (8)0.0179 (2)
N30.00696 (11)0.25532 (8)0.38914 (9)0.0164 (2)
N40.08649 (11)0.15773 (9)0.44203 (9)0.0196 (2)
N50.59545 (13)−0.18126 (11)0.33417 (11)0.0313 (3)
C1−0.02269 (13)0.29884 (10)0.27574 (10)0.0167 (2)
C2−0.06308 (13)0.32779 (11)0.45797 (11)0.0181 (2)
C3−0.17203 (13)0.47954 (10)0.19116 (10)0.0157 (2)
H3−0.12890.46040.11330.019*
C4−0.12191 (13)0.60715 (10)0.16885 (10)0.0176 (3)
H4A−0.17060.66300.10940.021*
H4B−0.15950.62580.24650.021*
C50.05068 (13)0.62844 (11)0.12070 (10)0.0177 (3)
C60.11439 (14)0.74641 (11)0.10917 (10)0.0204 (3)
C70.27293 (16)0.75992 (13)0.08526 (12)0.0291 (3)
H70.33830.69550.07480.035*
C80.33498 (18)0.86764 (14)0.07670 (13)0.0394 (4)
H80.44280.87690.06070.047*
C90.23910 (19)0.96179 (13)0.09158 (13)0.0386 (4)
H90.28181.03580.08450.046*
C100.08236 (18)0.94858 (12)0.11653 (12)0.0326 (3)
H100.01741.01300.12780.039*
C110.01941 (16)0.84130 (11)0.12527 (11)0.0251 (3)
H11−0.08860.83250.14230.030*
C12−0.34582 (13)0.46533 (10)0.22760 (10)0.0164 (2)
C13−0.43887 (14)0.49889 (11)0.32564 (11)0.0207 (3)
H13−0.39320.52890.37230.025*
C14−0.59773 (14)0.48880 (11)0.35547 (11)0.0237 (3)
H14−0.66010.51140.42270.028*
C15−0.66556 (14)0.44607 (12)0.28775 (11)0.0255 (3)
H15−0.77430.44010.30780.031*
C16−0.57461 (15)0.41212 (12)0.19071 (12)0.0278 (3)
H16−0.62090.38250.14420.033*
C17−0.41507 (14)0.42135 (11)0.16104 (11)0.0228 (3)
H17−0.35310.39730.09460.027*
C180.17967 (14)0.10503 (11)0.37509 (11)0.0234 (3)
H180.19240.12950.28950.028*
C190.26734 (14)0.00548 (11)0.43263 (11)0.0208 (3)
C200.38127 (14)−0.04456 (12)0.35914 (12)0.0244 (3)
H200.3982−0.01810.27300.029*
C210.46964 (14)−0.13341 (11)0.41314 (12)0.0229 (3)
C220.44816 (14)−0.17667 (11)0.53782 (12)0.0236 (3)
H220.5108−0.23790.57240.028*
C230.33234 (15)−0.12806 (11)0.61123 (12)0.0249 (3)
H230.3142−0.15680.69750.030*
C240.24284 (14)−0.03785 (11)0.55959 (11)0.0228 (3)
H240.1641−0.00510.61080.027*
C25−0.05494 (15)0.30789 (12)0.58367 (11)0.0268 (3)
H25A−0.10450.37380.61210.040*
H25B0.05290.30480.58380.040*
H25C−0.10780.23190.63830.040*
U11U22U33U12U13U23
S10.03061 (18)0.02282 (18)0.02119 (17)0.01031 (13)−0.01063 (14)−0.01219 (14)
O10.0183 (4)0.0238 (5)0.0240 (5)0.0038 (3)−0.0054 (4)−0.0089 (4)
O20.0497 (7)0.0763 (9)0.0373 (6)0.0366 (6)−0.0175 (5)−0.0258 (6)
O30.0318 (6)0.0383 (6)0.0484 (6)0.0215 (5)−0.0167 (5)−0.0164 (5)
N10.0162 (5)0.0169 (5)0.0133 (5)0.0032 (4)−0.0047 (4)−0.0063 (4)
N20.0187 (5)0.0214 (5)0.0154 (5)0.0043 (4)−0.0063 (4)−0.0078 (4)
N30.0170 (5)0.0156 (5)0.0175 (5)0.0048 (4)−0.0072 (4)−0.0053 (4)
N40.0190 (5)0.0164 (5)0.0241 (5)0.0052 (4)−0.0110 (4)−0.0040 (4)
N50.0257 (6)0.0334 (7)0.0388 (7)0.0122 (5)−0.0128 (5)−0.0160 (6)
C10.0159 (6)0.0157 (6)0.0179 (6)0.0013 (4)−0.0055 (5)−0.0043 (5)
C20.0160 (6)0.0206 (6)0.0186 (6)0.0029 (5)−0.0051 (5)−0.0078 (5)
C30.0162 (6)0.0178 (6)0.0137 (6)0.0040 (4)−0.0059 (5)−0.0049 (5)
C40.0182 (6)0.0174 (6)0.0163 (6)0.0040 (5)−0.0047 (5)−0.0052 (5)
C50.0201 (6)0.0204 (6)0.0124 (6)0.0014 (5)−0.0062 (5)−0.0035 (5)
C60.0259 (7)0.0223 (6)0.0132 (6)−0.0024 (5)−0.0068 (5)−0.0043 (5)
C70.0267 (7)0.0344 (8)0.0279 (7)−0.0040 (6)−0.0062 (6)−0.0125 (6)
C80.0338 (8)0.0462 (10)0.0393 (9)−0.0160 (7)−0.0080 (7)−0.0136 (7)
C90.0554 (10)0.0269 (8)0.0357 (8)−0.0141 (7)−0.0163 (7)−0.0070 (7)
C100.0503 (9)0.0218 (7)0.0277 (7)−0.0012 (6)−0.0167 (7)−0.0052 (6)
C110.0330 (7)0.0209 (7)0.0220 (7)0.0007 (5)−0.0110 (6)−0.0050 (5)
C120.0165 (6)0.0144 (6)0.0172 (6)0.0031 (4)−0.0065 (5)−0.0025 (5)
C130.0198 (6)0.0227 (6)0.0212 (6)0.0040 (5)−0.0075 (5)−0.0082 (5)
C140.0192 (6)0.0260 (7)0.0223 (7)0.0061 (5)−0.0034 (5)−0.0063 (6)
C150.0155 (6)0.0282 (7)0.0287 (7)0.0017 (5)−0.0071 (5)−0.0033 (6)
C160.0244 (7)0.0333 (8)0.0301 (7)−0.0019 (6)−0.0128 (6)−0.0111 (6)
C170.0220 (6)0.0259 (7)0.0221 (6)0.0015 (5)−0.0068 (5)−0.0096 (6)
C180.0233 (7)0.0250 (7)0.0223 (7)0.0071 (5)−0.0092 (5)−0.0072 (6)
C190.0194 (6)0.0179 (6)0.0273 (7)0.0037 (5)−0.0103 (5)−0.0076 (5)
C200.0231 (7)0.0271 (7)0.0259 (7)0.0067 (5)−0.0108 (5)−0.0103 (6)
C210.0195 (6)0.0205 (6)0.0320 (7)0.0049 (5)−0.0091 (5)−0.0122 (6)
C220.0201 (6)0.0161 (6)0.0346 (7)0.0027 (5)−0.0125 (5)−0.0044 (6)
C230.0241 (7)0.0216 (7)0.0256 (7)0.0006 (5)−0.0086 (5)−0.0019 (6)
C240.0205 (6)0.0202 (6)0.0273 (7)0.0029 (5)−0.0071 (5)−0.0076 (6)
C250.0315 (7)0.0312 (7)0.0220 (7)0.0127 (6)−0.0133 (6)−0.0117 (6)
S1—C11.6656 (12)C10—C111.3870 (18)
O1—C51.2176 (14)C10—H100.9500
O2—N51.2278 (14)C11—H110.9500
O3—N51.2244 (14)C12—C171.3878 (17)
N1—C11.3488 (14)C12—C131.3952 (16)
N1—N21.3828 (12)C13—C141.3880 (17)
N1—C31.4765 (14)C13—H130.9500
N2—C21.2975 (15)C14—C151.3824 (18)
N3—C21.3802 (14)C14—H140.9500
N3—N41.3881 (13)C15—C161.3820 (17)
N3—C11.3944 (14)C15—H150.9500
N4—C181.2694 (14)C16—C171.3933 (17)
N5—C211.4697 (16)C16—H160.9500
C2—C251.4801 (16)C17—H170.9500
C3—C121.5187 (15)C18—C191.4676 (16)
C3—C41.5202 (16)C18—H180.9500
C3—H31.0000C19—C201.3884 (17)
C4—C51.5152 (15)C19—C241.4010 (17)
C4—H4A0.9900C20—C211.3815 (17)
C4—H4B0.9900C20—H200.9500
C5—C61.4955 (17)C21—C221.3793 (17)
C6—C111.3944 (17)C22—C231.3875 (17)
C6—C71.3963 (17)C22—H220.9500
C7—C81.3890 (19)C23—C241.3866 (17)
C7—H70.9500C23—H230.9500
C8—C91.388 (2)C24—H240.9500
C8—H80.9500C25—H25A0.9800
C9—C101.378 (2)C25—H25B0.9800
C9—H90.9500C25—H25C0.9800
C1—N1—N2113.68 (9)C10—C11—H11119.9
C1—N1—C3127.18 (10)C6—C11—H11119.9
N2—N1—C3119.13 (9)C17—C12—C13118.78 (11)
C2—N2—N1104.77 (9)C17—C12—C3120.07 (10)
C2—N3—N4117.92 (9)C13—C12—C3121.13 (10)
C2—N3—C1108.76 (9)C14—C13—C12120.45 (12)
N4—N3—C1133.31 (9)C14—C13—H13119.8
C18—N4—N3119.73 (10)C12—C13—H13119.8
O3—N5—O2123.47 (11)C15—C14—C13120.29 (12)
O3—N5—C21118.13 (11)C15—C14—H14119.9
O2—N5—C21118.39 (11)C13—C14—H14119.9
N1—C1—N3102.22 (9)C16—C15—C14119.79 (12)
N1—C1—S1128.11 (9)C16—C15—H15120.1
N3—C1—S1129.64 (9)C14—C15—H15120.1
N2—C2—N3110.56 (10)C15—C16—C17120.06 (12)
N2—C2—C25126.08 (11)C15—C16—H16120.0
N3—C2—C25123.34 (10)C17—C16—H16120.0
N1—C3—C12110.99 (9)C12—C17—C16120.62 (12)
N1—C3—C4109.66 (9)C12—C17—H17119.7
C12—C3—C4111.73 (9)C16—C17—H17119.7
N1—C3—H3108.1N4—C18—C19118.61 (11)
C12—C3—H3108.1N4—C18—H18120.7
C4—C3—H3108.1C19—C18—H18120.7
C5—C4—C3113.55 (10)C20—C19—C24118.98 (11)
C5—C4—H4A108.9C20—C19—C18119.20 (11)
C3—C4—H4A108.9C24—C19—C18121.78 (11)
C5—C4—H4B108.9C21—C20—C19119.02 (12)
C3—C4—H4B108.9C21—C20—H20120.5
H4A—C4—H4B107.7C19—C20—H20120.5
O1—C5—C6120.86 (11)C22—C21—C20122.89 (11)
O1—C5—C4120.93 (11)C22—C21—N5118.42 (11)
C6—C5—C4118.20 (10)C20—C21—N5118.66 (11)
C11—C6—C7119.51 (12)C21—C22—C23117.96 (11)
C11—C6—C5121.74 (11)C21—C22—H22121.0
C7—C6—C5118.72 (11)C23—C22—H22121.0
C8—C7—C6119.97 (14)C24—C23—C22120.48 (12)
C8—C7—H7120.0C24—C23—H23119.8
C6—C7—H7120.0C22—C23—H23119.8
C9—C8—C7119.85 (14)C23—C24—C19120.66 (11)
C9—C8—H8120.1C23—C24—H24119.7
C7—C8—H8120.1C19—C24—H24119.7
C10—C9—C8120.45 (13)C2—C25—H25A109.5
C10—C9—H9119.8C2—C25—H25B109.5
C8—C9—H9119.8H25A—C25—H25B109.5
C9—C10—C11120.07 (14)C2—C25—H25C109.5
C9—C10—H10120.0H25A—C25—H25C109.5
C11—C10—H10120.0H25B—C25—H25C109.5
C10—C11—C6120.13 (13)
C1—N1—N2—C2−0.75 (13)C8—C9—C10—C11−0.9 (2)
C3—N1—N2—C2−179.67 (10)C9—C10—C11—C60.17 (19)
C2—N3—N4—C18−164.43 (11)C7—C6—C11—C100.54 (18)
C1—N3—N4—C1816.93 (19)C5—C6—C11—C10178.58 (11)
N2—N1—C1—N30.20 (12)N1—C3—C12—C17−113.03 (12)
C3—N1—C1—N3179.01 (10)C4—C3—C12—C17124.22 (12)
N2—N1—C1—S1178.48 (9)N1—C3—C12—C1368.72 (13)
C3—N1—C1—S1−2.70 (18)C4—C3—C12—C13−54.02 (14)
C2—N3—C1—N10.41 (12)C17—C12—C13—C14−0.26 (17)
N4—N3—C1—N1179.13 (11)C3—C12—C13—C14178.01 (10)
C2—N3—C1—S1−177.84 (10)C12—C13—C14—C15−0.43 (18)
N4—N3—C1—S10.88 (19)C13—C14—C15—C160.66 (19)
N1—N2—C2—N30.99 (13)C14—C15—C16—C17−0.21 (19)
N1—N2—C2—C25179.86 (11)C13—C12—C17—C160.71 (18)
N4—N3—C2—N2−179.87 (10)C3—C12—C17—C16−177.57 (11)
C1—N3—C2—N2−0.92 (13)C15—C16—C17—C12−0.48 (19)
N4—N3—C2—C251.22 (17)N3—N4—C18—C19177.32 (10)
C1—N3—C2—C25−179.83 (11)N4—C18—C19—C20−173.19 (12)
C1—N1—C3—C12110.32 (12)N4—C18—C19—C244.59 (18)
N2—N1—C3—C12−70.93 (12)C24—C19—C20—C21−1.64 (19)
C1—N1—C3—C4−125.75 (12)C18—C19—C20—C21176.20 (12)
N2—N1—C3—C453.00 (13)C19—C20—C21—C221.2 (2)
N1—C3—C4—C561.96 (12)C19—C20—C21—N5−176.71 (11)
C12—C3—C4—C5−174.54 (9)O3—N5—C21—C22−4.44 (18)
C3—C4—C5—O15.85 (15)O2—N5—C21—C22176.29 (13)
C3—C4—C5—C6−173.01 (9)O3—N5—C21—C20173.56 (12)
O1—C5—C6—C11172.26 (11)O2—N5—C21—C20−5.71 (19)
C4—C5—C6—C11−8.89 (16)C20—C21—C22—C230.00 (19)
O1—C5—C6—C7−9.69 (17)N5—C21—C22—C23177.90 (11)
C4—C5—C6—C7169.17 (10)C21—C22—C23—C24−0.70 (19)
C11—C6—C7—C8−0.52 (19)C22—C23—C24—C190.22 (19)
C5—C6—C7—C8−178.62 (11)C20—C19—C24—C230.97 (18)
C6—C7—C8—C9−0.2 (2)C18—C19—C24—C23−176.82 (12)
C7—C8—C9—C100.9 (2)
D—H···AD—HH···AD···AD—H···A
C3—H3···O1i1.002.573.4922 (15)154
C4—H4B···O3ii0.992.593.5002 (16)153
C17—H17···O1i0.952.473.3076 (15)147
C25—H25B···O3iii0.982.573.5310 (18)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O1i1.002.573.4922 (15)154
C4—H4B⋯O3ii0.992.593.5002 (16)153
C17—H17⋯O1i0.952.473.3076 (15)147
C25—H25B⋯O3iii0.982.573.5310 (18)168

Symmetry codes: (i) ; (ii) ; (iii) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  3-{1-[4-(2-Methyl-prop-yl)phen-yl]eth-yl}-1-(morpholinometh-yl)-4-(4-nitro-benzyl-ideneamino)-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Hoong-Kun Fun; Suchada Chantrapromma; K V Sujith; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-11

3.  3-(1-Adamant-yl)-1-{[4-(2-meth-oxy-phen-yl)piperazin-1-yl]meth-yl}-4-methyl-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Abdul-Malek S Al-Tamimi; Ahmed Bari; Mohamed A Al-Omar; Khalid A Alrashood; Ali A El-Emam
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-23

4.  1-(2-Benzoyl-1-phenyl-eth-yl)-4-[(2-hy-droxy-1-naphth-yl)methyl-idene-amino]-3-methyl-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Wei Wang; Yan Gao; Zuo-Bing Xiao; Hong-Guo Yao; Jing-Jing Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-08

5.  4,4',5,5'-Tetra-phenyl-3,3'-[methyl-idene-bis(sulfanedi-yl)]bis-(4H-1,2,4-triazole).

Authors:  Bing Zhao; Zhuo Liu; Yan Gao; Bo Song; Qi-Gang Deng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-20

6.  5-Ethyl-5-methyl-4-phenyl-5H-1,2,4-triazol-3(4H)-thione.

Authors:  Kong Wai Tan; M Jamil Maah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-11

7.  3-(4-Amino-3-phenyl-5-sulfanyl-idene-4,5-dihydro-1H-1,2,4-triazol-1-yl)-3-(2-chloro-phen-yl)-1-phenyl-propan-1-one.

Authors:  Yan Gao; Li-Hua Zhang; He-Wen Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-25
  7 in total

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