Literature DB >> 22058981

3,3'-Diphenyl-1,1'-(butane-1,4-di-yl)dithio-urea.

Pramod Pansuriya1, Holger B Friedrich, Glenn E M Maguire.   

Abstract

The asymmetric unit of the title compound, C(18)H(22)N(4)S(2), contains one half-mol-ecule, the complete mol-ecule being generated by crystallographic inversion symmetry. The crystal structure features two inter-molecular N-H⋯S hydrogen-bonding inter-actions, the first generating an infinite chain along the b axis and the second an infinite chain along the a axis, together forming an inter-locking structure.

Entities:  

Year:  2011        PMID: 22058981      PMCID: PMC3200795          DOI: 10.1107/S1600536811033071

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Thio­urea derivatives are conspicuous for their biological activity as they form strong hydrogen-bonding inter­actions and coordinate to metal ions, see: Wittkopp & Schreiner (2003 ▶); Li et al. (2008 ▶). For appliactions of thio­urea, see Abdallah et al. (2006 ▶); Karamé et al. (2003 ▶); Nan et al. (2000 ▶); Breuzard et al. (2000 ▶); Tommasino et al., (2000 ▶); Reinoso García et al. (2004 ▶); Leung et al. (2008 ▶). For synthesis of the title compound, see: Lee et al. (1985 ▶).

Experimental

Crystal data

C18H22N4S2 M = 358.52 Monoclinic, a = 9.6795 (3) Å b = 7.8677 (3) Å c = 12.3213 (4) Å β = 105.816 (2)° V = 902.81 (5) Å3 Z = 2 Mo Kα radiation μ = 0.30 mm−1 T = 173 K 0.46 × 0.45 × 0.13 mm

Data collection

Bruker APEXII CCD diffractometer 9210 measured reflections 2192 independent reflections 1710 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.093 S = 1.06 2192 reflections 117 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.45 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT-Plus (Bruker, 2006 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811033071/om2458sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033071/om2458Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811033071/om2458Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H22N4S2F(000) = 380
Mr = 358.52Dx = 1.319 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3394 reflections
a = 9.6795 (3) Åθ = 3.1–28.2°
b = 7.8677 (3) ŵ = 0.30 mm1
c = 12.3213 (4) ÅT = 173 K
β = 105.816 (2)°Plate, colourless
V = 902.81 (5) Å30.46 × 0.45 × 0.13 mm
Z = 2
Bruker APEXII CCD diffractometer1710 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.042
graphiteθmax = 28.0°, θmin = 2.2°
φ and ω scansh = −12→12
9210 measured reflectionsk = −10→10
2192 independent reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0513P)2 + 0.0075P] where P = (Fo2 + 2Fc2)/3
2192 reflections(Δ/σ)max = 0.005
117 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.23226 (14)−0.10682 (19)0.10971 (12)0.0250 (3)
C20.17043 (15)−0.0394 (2)0.19000 (13)0.0314 (4)
H20.22230.03920.24450.038*
C30.03242 (16)−0.0880 (2)0.18976 (14)0.0383 (4)
H3−0.0092−0.04490.24570.046*
C4−0.04488 (16)−0.1990 (2)0.10837 (15)0.0393 (4)
H4−0.1387−0.23330.10920.047*
C50.01453 (16)−0.2598 (2)0.02594 (14)0.0366 (4)
H5−0.0397−0.3326−0.03150.044*
C60.15346 (15)−0.2145 (2)0.02723 (12)0.0296 (3)
H60.1947−0.2578−0.02890.036*
C70.49385 (14)−0.05136 (17)0.19228 (11)0.0223 (3)
C80.60322 (15)−0.0926 (2)0.39648 (12)0.0286 (3)
H8A0.66450.00720.39380.034*
H8B0.6631−0.19610.40270.034*
C90.54395 (17)−0.0793 (2)0.49881 (12)0.0316 (3)
H9A0.4833−0.18010.50040.038*
H9B0.6253−0.08210.56800.038*
N10.37258 (12)−0.05795 (17)0.10580 (10)0.0265 (3)
N20.48550 (13)−0.10013 (17)0.29351 (10)0.0261 (3)
S10.65024 (4)0.01605 (5)0.16882 (3)0.02773 (13)
H1N0.3820 (18)−0.045 (2)0.0393 (15)0.036 (5)*
H2N0.4173 (16)−0.158 (2)0.2950 (13)0.028 (4)*
U11U22U33U12U13U23
C10.0203 (7)0.0312 (8)0.0236 (7)0.0032 (6)0.0058 (5)0.0059 (6)
C20.0244 (7)0.0448 (9)0.0253 (8)0.0052 (6)0.0073 (6)0.0008 (6)
C30.0274 (8)0.0553 (11)0.0354 (9)0.0102 (7)0.0140 (7)0.0074 (8)
C40.0216 (7)0.0464 (10)0.0506 (10)0.0014 (7)0.0110 (7)0.0127 (8)
C50.0254 (8)0.0352 (9)0.0450 (10)−0.0020 (6)0.0024 (7)0.0003 (7)
C60.0260 (7)0.0321 (8)0.0301 (8)0.0030 (6)0.0062 (6)0.0008 (6)
C70.0219 (7)0.0238 (7)0.0225 (7)0.0013 (5)0.0083 (5)−0.0036 (5)
C80.0223 (7)0.0392 (8)0.0230 (7)0.0017 (6)0.0041 (6)−0.0015 (6)
C90.0311 (8)0.0392 (9)0.0234 (7)0.0028 (7)0.0057 (6)0.0023 (6)
N10.0221 (6)0.0406 (7)0.0181 (6)−0.0017 (5)0.0076 (5)0.0001 (5)
N20.0204 (6)0.0368 (7)0.0215 (6)−0.0068 (5)0.0064 (5)0.0008 (5)
S10.0215 (2)0.0385 (2)0.0256 (2)−0.00221 (15)0.01058 (15)−0.00035 (15)
C1—C61.382 (2)C7—N21.3283 (17)
C1—C21.393 (2)C7—N11.3543 (18)
C1—N11.4250 (17)C7—S11.7014 (14)
C2—C31.389 (2)C8—N21.4572 (18)
C2—H20.9500C8—C91.5246 (19)
C3—C41.385 (2)C8—H8A0.9900
C3—H30.9500C8—H8B0.9900
C4—C51.382 (2)C9—C9i1.516 (3)
C4—H40.9500C9—H9A0.9900
C5—C61.387 (2)C9—H9B0.9900
C5—H50.9500N1—H1N0.855 (18)
C6—H60.9500N2—H2N0.806 (15)
C6—C1—C2119.85 (13)N1—C7—S1119.92 (10)
C6—C1—N1118.73 (12)N2—C8—C9109.98 (11)
C2—C1—N1121.28 (13)N2—C8—H8A109.7
C3—C2—C1119.53 (15)C9—C8—H8A109.7
C3—C2—H2120.2N2—C8—H8B109.7
C1—C2—H2120.2C9—C8—H8B109.7
C4—C3—C2120.30 (15)H8A—C8—H8B108.2
C4—C3—H3119.9C9i—C9—C8114.35 (16)
C2—C3—H3119.9C9i—C9—H9A108.7
C5—C4—C3119.97 (14)C8—C9—H9A108.7
C5—C4—H4120.0C9i—C9—H9B108.7
C3—C4—H4120.0C8—C9—H9B108.7
C4—C5—C6119.93 (15)H9A—C9—H9B107.6
C4—C5—H5120.0C7—N1—C1127.84 (12)
C6—C5—H5120.0C7—N1—H1N117.0 (12)
C1—C6—C5120.33 (14)C1—N1—H1N114.6 (12)
C1—C6—H6119.8C7—N2—C8124.94 (12)
C5—C6—H6119.8C7—N2—H2N116.4 (11)
N2—C7—N1117.79 (12)C8—N2—H2N117.0 (11)
N2—C7—S1122.29 (11)
C6—C1—C2—C33.2 (2)N2—C8—C9—C9i−62.1 (2)
N1—C1—C2—C3178.86 (14)N2—C7—N1—C12.1 (2)
C1—C2—C3—C4−1.8 (2)S1—C7—N1—C1−178.44 (12)
C2—C3—C4—C5−1.0 (3)C6—C1—N1—C7−135.44 (15)
C3—C4—C5—C62.3 (3)C2—C1—N1—C748.9 (2)
C2—C1—C6—C5−1.9 (2)N1—C7—N2—C8−176.58 (13)
N1—C1—C6—C5−177.63 (14)S1—C7—N2—C84.0 (2)
C4—C5—C6—C1−0.9 (2)C9—C8—N2—C7154.26 (15)
D—H···AD—HH···AD···AD—H···A
N1—H1N···S1ii0.855 (18)2.508 (18)3.3465 (13)167.1 (15)
N2—H2N···S1iii0.806 (15)2.713 (16)3.3755 (14)140.7 (13)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯S1i0.855 (18)2.508 (18)3.3465 (13)167.1 (15)
N2—H2N⋯S1ii0.806 (15)2.713 (16)3.3755 (14)140.7 (13)

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A new complex of palladium-thiourea and carbon tetrabromide catalyzed carbonylative annulation of o-hydroxylarylacetylenes: efficient new synthetic technology for the synthesis of 2,3-disubstituted benzo[b]furans.

Authors:  Y Nan; H Miao; Z Yang
Journal:  Org Lett       Date:  2000-02-10       Impact factor: 6.005

3.  Development of selective inhibitors of transglutaminase. Phenylthiourea derivatives.

Authors:  K N Lee; L Fesus; S T Yancey; J E Girard; S I Chung
Journal:  J Biol Chem       Date:  1985-11-25       Impact factor: 5.157

4.  Metal-free, noncovalent catalysis of diels-alder reactions by neutral hydrogen bond donors in organic solvents and in water.

Authors:  Alexander Wittkopp; Peter R Schreiner
Journal:  Chemistry       Date:  2003-01-20       Impact factor: 5.236

  4 in total
  1 in total

1.  1,1'-(Ethane-1,2-di-yl)bis-(3-phenyl-thio-urea).

Authors:  Pramod B Pansuriya; Holger B Friedrich; Glenn E M Maguire
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-05
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.