Literature DB >> 22058970

1-Benzyl-2,5-diphenyl-3-tosylimidazol-idin-4-one.

K Sakthimurugesan, S Ranjith, A Subbiahpandi, K Namitharan, K Pitchumani.   

Abstract

In the title compound, C(29)H(26)N(2)O(3)S, the central imidazolidine ring adopts an envelope conformation with the N atom bearing the benzyl ring at the flap. The S atom has distorted tetra-hedral geometry. The benzyl and tosyl rings are oriented at a dihedral angle of 52.1 (1)°. The phenyl rings connected to the imidazolidine ring form a dihedral angle of 28.7 (1)°.

Entities:  

Year:  2011        PMID: 22058970      PMCID: PMC3200849          DOI: 10.1107/S1600536811032284

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of sulfonamides, see: Zareef et al. (2007 ▶); Chohan & Shad (2007 ▶); Pomarnacka & Kozlarska-Kedra (2003 ▶); Nieto et al. (2005 ▶); Wang et al. (1995 ▶). For a related structure, see: Ranjith et al. (2011 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For asymmetry parameters, see: Nardelli et al. (1983 ▶).

Experimental

Crystal data

C29H26N2O3S M = 482.58 Monoclinic, a = 18.6024 (7) Å b = 8.0489 (3) Å c = 17.0860 (6) Å β = 106.426 (2)° V = 2453.85 (16) Å3 Z = 4 Mo Kα radiation μ = 0.17 mm−1 T = 293 K 0.25 × 0.22 × 0.19 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.981, T max = 0.985 25449 measured reflections 4805 independent reflections 3598 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.115 S = 1.01 4805 reflections 317 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811032284/ci5194sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811032284/ci5194Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811032284/ci5194Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C29H26N2O3SF(000) = 1016
Mr = 482.58Dx = 1.306 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4805 reflections
a = 18.6024 (7) Åθ = 1.1–26.0°
b = 8.0489 (3) ŵ = 0.17 mm1
c = 17.0860 (6) ÅT = 293 K
β = 106.426 (2)°Block, white crystalline
V = 2453.85 (16) Å30.25 × 0.22 × 0.19 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer4805 independent reflections
Radiation source: fine-focus sealed tube3598 reflections with I > 2σ(I)
graphiteRint = 0.032
ω and φ scansθmax = 26.0°, θmin = 1.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −22→20
Tmin = 0.981, Tmax = 0.985k = −9→8
25449 measured reflectionsl = −20→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0556P)2 + 0.6284P] where P = (Fo2 + 2Fc2)/3
4805 reflections(Δ/σ)max = 0.001
317 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.38 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.59892 (15)1.1019 (4)0.3124 (2)0.1139 (11)
H1A0.63611.10750.36440.171*
H1B0.59891.20390.28330.171*
H1C0.61031.01110.28140.171*
C20.52227 (12)1.0751 (3)0.32515 (14)0.0663 (6)
C30.45945 (13)1.1508 (3)0.27587 (14)0.0714 (6)
H30.46441.22090.23440.086*
C40.38964 (11)1.1257 (3)0.28613 (12)0.0584 (5)
H40.34781.17770.25190.070*
C50.38237 (9)1.0228 (2)0.34764 (10)0.0421 (4)
C60.44422 (10)0.9453 (2)0.39808 (12)0.0548 (5)
H60.43930.87500.43950.066*
C70.51360 (11)0.9735 (3)0.38628 (14)0.0665 (6)
H70.55560.92230.42070.080*
C80.23093 (9)0.6933 (2)0.36626 (10)0.0414 (4)
H80.19280.73700.39040.050*
C90.29247 (9)0.6072 (2)0.43025 (10)0.0453 (4)
C100.34796 (11)0.5227 (3)0.40738 (12)0.0576 (5)
H100.34750.52060.35280.069*
C110.40383 (12)0.4417 (3)0.46466 (15)0.0739 (6)
H110.44120.38530.44910.089*
C120.40401 (15)0.4446 (3)0.54519 (15)0.0843 (7)
H120.44230.39190.58430.101*
C130.34830 (16)0.5244 (3)0.56805 (14)0.0809 (7)
H130.34800.52340.62240.097*
C140.29260 (12)0.6062 (3)0.51072 (11)0.0614 (5)
H140.25490.66110.52650.074*
C150.14866 (9)0.4518 (2)0.31824 (11)0.0435 (4)
H15A0.17470.40210.37020.052*
H15B0.14170.36550.27710.052*
C160.07241 (9)0.50676 (19)0.32246 (10)0.0405 (4)
C170.05947 (11)0.5553 (2)0.39499 (12)0.0544 (5)
H170.09890.55650.44270.065*
C18−0.01143 (12)0.6018 (3)0.39741 (14)0.0649 (6)
H18−0.01920.63500.44650.078*
C19−0.07037 (11)0.5994 (2)0.32768 (14)0.0617 (5)
H19−0.11810.62980.32950.074*
C20−0.05838 (10)0.5521 (2)0.25558 (13)0.0580 (5)
H20−0.09810.55130.20810.070*
C210.01189 (10)0.5057 (2)0.25284 (12)0.0489 (4)
H210.01910.47300.20340.059*
C220.16901 (9)0.6743 (2)0.22488 (10)0.0419 (4)
H220.11950.71900.22290.050*
C230.22466 (9)0.8161 (2)0.23794 (11)0.0455 (4)
C240.16290 (10)0.5747 (2)0.14846 (10)0.0451 (4)
C250.11035 (13)0.6192 (3)0.07717 (12)0.0692 (6)
H250.07890.70930.07660.083*
C260.10414 (17)0.5299 (4)0.00611 (14)0.0879 (8)
H260.06850.5605−0.04190.105*
C270.14972 (16)0.3984 (3)0.00633 (15)0.0830 (7)
H270.14550.3393−0.04150.100*
C280.20162 (15)0.3530 (3)0.07650 (16)0.0812 (7)
H280.23280.26270.07660.097*
C290.20811 (12)0.4407 (3)0.14747 (13)0.0638 (5)
H290.24360.40860.19530.077*
N10.25830 (8)0.82623 (17)0.32174 (8)0.0452 (3)
N20.19719 (7)0.58031 (16)0.29956 (8)0.0404 (3)
O10.24894 (7)1.13491 (17)0.32774 (10)0.0749 (5)
O20.30718 (8)0.97342 (18)0.45167 (8)0.0668 (4)
O30.23762 (7)0.90679 (16)0.18789 (8)0.0610 (4)
S10.29541 (2)1.00278 (5)0.36717 (3)0.04955 (15)
U11U22U33U12U13U23
C10.0717 (17)0.137 (3)0.153 (3)−0.0412 (18)0.0645 (18)−0.059 (2)
C20.0541 (13)0.0747 (14)0.0762 (14)−0.0185 (11)0.0283 (11)−0.0283 (12)
C30.0761 (16)0.0759 (15)0.0662 (13)−0.0238 (13)0.0269 (12)0.0004 (11)
C40.0532 (12)0.0566 (11)0.0588 (11)−0.0067 (10)0.0050 (9)0.0084 (9)
C50.0362 (9)0.0389 (9)0.0485 (9)−0.0027 (7)0.0077 (7)−0.0069 (7)
C60.0466 (11)0.0569 (11)0.0574 (11)0.0054 (9)0.0092 (9)0.0047 (9)
C70.0393 (11)0.0765 (15)0.0769 (14)0.0085 (10)0.0051 (10)−0.0123 (12)
C80.0348 (9)0.0426 (9)0.0487 (9)−0.0014 (7)0.0146 (7)−0.0042 (7)
C90.0392 (9)0.0472 (10)0.0470 (9)−0.0033 (8)0.0082 (7)−0.0025 (8)
C100.0475 (11)0.0686 (13)0.0538 (11)0.0074 (10)0.0096 (9)−0.0021 (9)
C110.0531 (13)0.0760 (15)0.0832 (16)0.0162 (11)0.0038 (11)−0.0034 (12)
C120.0822 (18)0.0794 (16)0.0699 (15)0.0139 (14)−0.0134 (13)0.0098 (13)
C130.0952 (19)0.0859 (17)0.0519 (12)0.0079 (15)0.0053 (12)0.0054 (11)
C140.0642 (13)0.0693 (13)0.0499 (11)0.0030 (11)0.0149 (9)−0.0016 (9)
C150.0391 (9)0.0359 (8)0.0534 (10)−0.0006 (7)0.0097 (8)0.0023 (7)
C160.0370 (9)0.0321 (8)0.0520 (9)−0.0033 (7)0.0120 (7)0.0029 (7)
C170.0485 (11)0.0609 (11)0.0540 (11)−0.0055 (9)0.0146 (9)0.0009 (9)
C180.0650 (14)0.0648 (13)0.0769 (14)−0.0025 (11)0.0398 (12)−0.0036 (11)
C190.0440 (11)0.0486 (11)0.0983 (16)0.0030 (9)0.0293 (11)0.0086 (11)
C200.0384 (10)0.0512 (11)0.0783 (14)−0.0009 (9)0.0064 (9)0.0082 (10)
C210.0425 (10)0.0461 (10)0.0562 (10)−0.0024 (8)0.0109 (8)−0.0001 (8)
C220.0349 (9)0.0414 (9)0.0485 (9)0.0004 (7)0.0104 (7)0.0013 (7)
C230.0390 (9)0.0422 (9)0.0546 (10)0.0013 (8)0.0119 (8)0.0022 (8)
C240.0425 (10)0.0457 (10)0.0483 (9)−0.0075 (8)0.0147 (8)−0.0016 (8)
C250.0835 (16)0.0604 (13)0.0554 (12)0.0079 (12)0.0060 (11)−0.0002 (10)
C260.114 (2)0.0915 (19)0.0479 (12)−0.0014 (16)0.0059 (13)−0.0045 (12)
C270.110 (2)0.0846 (18)0.0618 (14)−0.0159 (16)0.0372 (14)−0.0192 (13)
C280.0861 (17)0.0805 (16)0.0884 (17)0.0104 (14)0.0433 (14)−0.0187 (13)
C290.0532 (12)0.0716 (13)0.0679 (13)0.0111 (11)0.0192 (10)−0.0088 (11)
N10.0424 (8)0.0405 (8)0.0512 (8)−0.0072 (6)0.0109 (6)−0.0030 (6)
N20.0346 (7)0.0390 (7)0.0455 (7)−0.0026 (6)0.0079 (6)−0.0006 (6)
O10.0429 (8)0.0440 (8)0.1284 (13)0.0088 (6)0.0087 (8)−0.0106 (8)
O20.0708 (10)0.0728 (9)0.0662 (9)−0.0216 (8)0.0346 (7)−0.0267 (7)
O30.0617 (9)0.0556 (8)0.0642 (8)−0.0102 (7)0.0153 (7)0.0122 (7)
S10.0380 (3)0.0413 (3)0.0695 (3)−0.00206 (19)0.0156 (2)−0.0123 (2)
C1—C21.517 (3)C15—H15B0.97
C1—H1A0.96C16—C171.384 (2)
C1—H1B0.96C16—C211.388 (2)
C1—H1C0.96C17—C181.383 (3)
C2—C71.372 (3)C17—H170.93
C2—C31.375 (3)C18—C191.372 (3)
C3—C41.374 (3)C18—H180.93
C3—H30.93C19—C201.367 (3)
C4—C51.375 (2)C19—H190.93
C4—H40.93C20—C211.373 (3)
C5—C61.377 (2)C20—H200.93
C5—S11.7492 (17)C21—H210.93
C6—C71.380 (3)C22—N21.448 (2)
C6—H60.93C22—C241.509 (2)
C7—H70.93C22—C231.514 (2)
C8—N21.454 (2)C22—H220.98
C8—N11.484 (2)C23—O31.199 (2)
C8—C91.510 (2)C23—N11.393 (2)
C8—H80.98C24—C291.370 (3)
C9—C141.374 (2)C24—C251.376 (3)
C9—C101.382 (3)C25—C261.387 (3)
C10—C111.374 (3)C25—H250.93
C10—H100.93C26—C271.356 (4)
C11—C121.375 (3)C26—H260.93
C11—H110.93C27—C281.360 (3)
C12—C131.367 (4)C27—H270.93
C12—H120.93C28—C291.379 (3)
C13—C141.376 (3)C28—H280.93
C13—H130.93C29—H290.93
C14—H140.93N1—S11.6719 (14)
C15—N21.466 (2)O1—S11.4152 (14)
C15—C161.507 (2)O2—S11.4176 (15)
C15—H15A0.97
C2—C1—H1A109.5C21—C16—C15120.25 (15)
C2—C1—H1B109.5C18—C17—C16120.81 (18)
H1A—C1—H1B109.5C18—C17—H17119.6
C2—C1—H1C109.5C16—C17—H17119.6
H1A—C1—H1C109.5C19—C18—C17120.31 (19)
H1B—C1—H1C109.5C19—C18—H18119.8
C7—C2—C3117.91 (19)C17—C18—H18119.8
C7—C2—C1120.8 (2)C20—C19—C18119.51 (18)
C3—C2—C1121.3 (2)C20—C19—H19120.2
C4—C3—C2121.8 (2)C18—C19—H19120.2
C4—C3—H3119.1C19—C20—C21120.41 (19)
C2—C3—H3119.1C19—C20—H20119.8
C3—C4—C5119.14 (19)C21—C20—H20119.8
C3—C4—H4120.4C20—C21—C16121.24 (18)
C5—C4—H4120.4C20—C21—H21119.4
C4—C5—C6120.42 (17)C16—C21—H21119.4
C4—C5—S1119.85 (14)N2—C22—C24113.86 (14)
C6—C5—S1119.54 (14)N2—C22—C23101.65 (13)
C5—C6—C7118.97 (19)C24—C22—C23114.16 (14)
C5—C6—H6120.5N2—C22—H22109.0
C7—C6—H6120.5C24—C22—H22109.0
C2—C7—C6121.7 (2)C23—C22—H22109.0
C2—C7—H7119.1O3—C23—N1125.08 (16)
C6—C7—H7119.1O3—C23—C22128.34 (16)
N2—C8—N1100.60 (12)N1—C23—C22106.56 (14)
N2—C8—C9110.56 (13)C29—C24—C25118.58 (18)
N1—C8—C9113.73 (13)C29—C24—C22122.18 (16)
N2—C8—H8110.5C25—C24—C22119.24 (17)
N1—C8—H8110.5C24—C25—C26120.2 (2)
C9—C8—H8110.5C24—C25—H25119.9
C14—C9—C10119.34 (17)C26—C25—H25119.9
C14—C9—C8120.91 (16)C27—C26—C25120.3 (2)
C10—C9—C8119.70 (15)C27—C26—H26119.8
C11—C10—C9120.48 (19)C25—C26—H26119.8
C11—C10—H10119.8C26—C27—C28120.0 (2)
C9—C10—H10119.8C26—C27—H27120.0
C10—C11—C12119.5 (2)C28—C27—H27120.0
C10—C11—H11120.3C27—C28—C29120.1 (2)
C12—C11—H11120.3C27—C28—H28119.9
C13—C12—C11120.4 (2)C29—C28—H28119.9
C13—C12—H12119.8C24—C29—C28120.8 (2)
C11—C12—H12119.8C24—C29—H29119.6
C12—C13—C14120.1 (2)C28—C29—H29119.6
C12—C13—H13120.0C23—N1—C8111.42 (13)
C14—C13—H13120.0C23—N1—S1122.21 (12)
C9—C14—C13120.2 (2)C8—N1—S1122.10 (11)
C9—C14—H14119.9C22—N2—C8109.39 (12)
C13—C14—H14119.9C22—N2—C15117.95 (12)
N2—C15—C16116.69 (13)C8—N2—C15115.24 (13)
N2—C15—H15A108.1O1—S1—O2120.51 (10)
C16—C15—H15A108.1O1—S1—N1107.54 (8)
N2—C15—H15B108.1O2—S1—N1104.82 (8)
C16—C15—H15B108.1O1—S1—C5108.26 (9)
H15A—C15—H15B107.3O2—S1—C5108.96 (8)
C17—C16—C21117.71 (17)N1—S1—C5105.81 (7)
C17—C16—C15122.02 (16)
C7—C2—C3—C4−0.6 (3)C23—C22—C24—C25−91.4 (2)
C1—C2—C3—C4179.1 (2)C29—C24—C25—C26−0.4 (3)
C2—C3—C4—C50.3 (3)C22—C24—C25—C26179.6 (2)
C3—C4—C5—C6−0.3 (3)C24—C25—C26—C270.0 (4)
C3—C4—C5—S1174.68 (16)C25—C26—C27—C280.3 (4)
C4—C5—C6—C70.5 (3)C26—C27—C28—C29−0.1 (4)
S1—C5—C6—C7−174.51 (15)C25—C24—C29—C280.5 (3)
C3—C2—C7—C60.8 (3)C22—C24—C29—C28−179.43 (19)
C1—C2—C7—C6−178.9 (2)C27—C28—C29—C24−0.3 (4)
C5—C6—C7—C2−0.7 (3)O3—C23—N1—C8−178.77 (16)
N2—C8—C9—C14−126.54 (18)C22—C23—N1—C82.63 (18)
N1—C8—C9—C14121.16 (18)O3—C23—N1—S124.0 (2)
N2—C8—C9—C1051.0 (2)C22—C23—N1—S1−154.56 (11)
N1—C8—C9—C10−61.3 (2)N2—C8—N1—C2316.44 (17)
C14—C9—C10—C11−1.6 (3)C9—C8—N1—C23134.65 (15)
C8—C9—C10—C11−179.11 (19)N2—C8—N1—S1173.67 (10)
C9—C10—C11—C120.3 (3)C9—C8—N1—S1−68.13 (17)
C10—C11—C12—C131.3 (4)C24—C22—N2—C8155.71 (13)
C11—C12—C13—C14−1.7 (4)C23—C22—N2—C832.47 (16)
C10—C9—C14—C131.2 (3)C24—C22—N2—C15−69.98 (18)
C8—C9—C14—C13178.72 (19)C23—C22—N2—C15166.78 (13)
C12—C13—C14—C90.4 (4)N1—C8—N2—C22−30.57 (15)
N2—C15—C16—C17−92.39 (19)C9—C8—N2—C22−151.07 (13)
N2—C15—C16—C2189.38 (19)N1—C8—N2—C15−166.24 (13)
C21—C16—C17—C18−0.4 (3)C9—C8—N2—C1573.27 (17)
C15—C16—C17—C18−178.65 (17)C16—C15—N2—C22−56.7 (2)
C16—C17—C18—C190.5 (3)C16—C15—N2—C875.00 (18)
C17—C18—C19—C20−0.6 (3)C23—N1—S1—O137.22 (16)
C18—C19—C20—C210.6 (3)C8—N1—S1—O1−117.56 (14)
C19—C20—C21—C16−0.5 (3)C23—N1—S1—O2166.60 (13)
C17—C16—C21—C200.4 (3)C8—N1—S1—O211.81 (15)
C15—C16—C21—C20178.67 (16)C23—N1—S1—C5−78.31 (15)
N2—C22—C23—O3160.73 (18)C8—N1—S1—C5126.91 (13)
C24—C22—C23—O337.7 (2)C4—C5—S1—O1−15.47 (17)
N2—C22—C23—N1−20.73 (16)C6—C5—S1—O1159.54 (14)
C24—C22—C23—N1−143.77 (15)C4—C5—S1—O2−148.21 (15)
N2—C22—C24—C29−27.6 (2)C6—C5—S1—O226.80 (17)
C23—C22—C24—C2988.6 (2)C4—C5—S1—N199.56 (15)
N2—C22—C24—C25152.48 (17)C6—C5—S1—N1−85.43 (15)
  7 in total

1.  Synthesis and antimalarial activity of novel chiral and achiral benzenesulfonamides bearing 1, 3, 4-oxadiazole moieties.

Authors:  Muhammad Zareef; Rashid Iqbal; Neira Gamboa De Dominguez; Juan Rodrigues; Javid H Zaidi; Muhammad Arfan; Claudiu T Supuran
Journal:  J Enzyme Inhib Med Chem       Date:  2007-06       Impact factor: 5.051

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Benzenesulfonamide analogs of fluoroquinolones. Antibacterial activity and QSAR studies.

Authors:  M J Nieto; F L Alovero; R H Manzo; Maria R Mazzieri
Journal:  Eur J Med Chem       Date:  2005-04       Impact factor: 6.514

4.  Structural elucidation and biological significance of 2-hydroxy-1-naphthaldehyde derived sulfonamides and their first row d-transition metal chelates.

Authors:  Zahid H Chohan; Hazoor A Shad
Journal:  J Enzyme Inhib Med Chem       Date:  2008-06       Impact factor: 5.051

5.  Synthesis of 1-(6-chloro-1,1-dioxo-1,4,2-benzodithiazin-3-yl)semi-carbazides and their transformation into 4-chloro-2-mercapto-N-(4,5-dihydro-5-oxo-4-phenyl-1H-1,2,4-triazol-3-yl)benzenesulfonamides as potential anticancer and anti-HIV agents.

Authors:  Elzbieta Pomarnacka; Iwona Kozlarska-Kedra
Journal:  Farmaco       Date:  2003-06

6.  2-(4-Chloro-phen-yl)-1,5-diphenyl-3-tosyl-imidazolidin-4-one.

Authors:  S Ranjith; A Subbiahpandi; K Namitharan; K Pitchumani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-12

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

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