Literature DB >> 22058968

Ethyl 6-amino-8-(4-chloro-phen-yl)-9-nitro-2,3,4,8-tetra-hydro-pyrido[2,1-b][1,3]thia-zine-7-carboxyl-ate.

Na Zhang, Xian Zhang, Dongmei Li.   

Abstract

In the structure of the title compound, C(17)H(18)ClN(3)O(4)S, the thia-zinane ring displays a twist-boat conformation. The 1,4-dihydro-pyridine ring is approximately perpendicular to the benzene ring [dihedral angle = 88.3 (1)°]. The mol-ecular conformation is stabilized by an intra-molecular N-H⋯O hydrogen bond. In the crystal, mol-ecules are linked by N-H⋯O inter-actions into a C(8) chain along [100].

Entities:  

Year:  2011        PMID: 22058968      PMCID: PMC3200856          DOI: 10.1107/S1600536811032193

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Tian et al. (2009 ▶). For puckering parameters, see: Cremer & Pople 1(975). For background to neonicotinoid insecticides, see: Mori et al. (2001 ▶); Kagabu (1997 ▶); Tian et al. (2007 ▶); Jeschke & Nauen (2008 ▶); Tomizawa & Casida (2005 ▶). For set-graph notation, see: Bernstein et al. (1995 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶);

Experimental

Crystal data

C17H18ClN3O4S M = 395.85 Triclinic, a = 8.6376 (8) Å b = 9.9719 (8) Å c = 12.0616 (11) Å α = 110.970 (8)° β = 103.252 (8)° γ = 99.663 (7)° V = 907.88 (16) Å3 Z = 2 Mo Kα radiation μ = 0.35 mm−1 T = 298 K 0.58 × 0.28 × 0.16 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.821, T max = 0.946 7457 measured reflections 3692 independent reflections 2856 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.119 S = 1.03 3692 reflections 242 parameters 4 restraints H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811032193/bx2362sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811032193/bx2362Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811032193/bx2362Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H18ClN3O4SZ = 2
Mr = 395.85F(000) = 412
Triclinic, P1Dx = 1.448 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.6376 (8) ÅCell parameters from 4541 reflections
b = 9.9719 (8) Åθ = 2.4–27.7°
c = 12.0616 (11) ŵ = 0.35 mm1
α = 110.970 (8)°T = 298 K
β = 103.252 (8)°Prism, colourless
γ = 99.663 (7)°0.58 × 0.28 × 0.16 mm
V = 907.88 (16) Å3
Bruker APEXII CCD area-detector diffractometer3692 independent reflections
Radiation source: fine-focus sealed tube2856 reflections with I > 2σ(I)
graphiteRint = 0.021
φ and ω scansθmax = 26.4°, θmin = 3.4°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −10→10
Tmin = 0.821, Tmax = 0.946k = −12→12
7457 measured reflectionsl = −15→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0499P)2 + 0.3496P] where P = (Fo2 + 2Fc2)/3
3692 reflections(Δ/σ)max < 0.001
242 parametersΔρmax = 0.30 e Å3
4 restraintsΔρmin = −0.38 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.55649 (9)0.69346 (7)1.02703 (6)0.0526 (2)
Cl1−0.06895 (8)0.51657 (8)0.27303 (6)0.0582 (2)
O10.7918 (2)1.0629 (2)0.70241 (19)0.0661 (6)
C120.0733 (3)0.6242 (3)0.4217 (2)0.0402 (5)
C130.1908 (3)0.5640 (2)0.4697 (2)0.0426 (5)
H130.19180.46650.42510.051*
C100.1846 (3)0.8525 (3)0.6042 (2)0.0415 (5)
H100.18100.94880.64960.050*
C150.6594 (3)1.0300 (3)0.7201 (2)0.0440 (5)
C140.3069 (3)0.6519 (2)0.5857 (2)0.0385 (5)
H140.38740.61280.61830.046*
C110.0684 (3)0.7665 (3)0.4875 (2)0.0478 (6)
H11−0.01200.80510.45430.057*
C160.5733 (4)1.1999 (3)0.6395 (3)0.0589 (7)
H16A0.60171.15470.56390.071*
H16B0.66551.28430.69940.071*
C60.7619 (4)0.6382 (3)0.8644 (3)0.0706 (8)
H6A0.83540.63410.81410.085*
H6B0.67670.54370.82470.085*
C50.7196 (3)0.8499 (3)0.8047 (2)0.0405 (5)
O20.53736 (19)1.09179 (17)0.69114 (15)0.0449 (4)
O30.2722 (2)0.75602 (19)0.98083 (15)0.0513 (4)
O40.21057 (18)0.91022 (19)0.89999 (15)0.0484 (4)
C30.4386 (2)0.8934 (2)0.78073 (18)0.0317 (4)
H30.41470.99010.81350.038*
N30.3003 (2)0.8315 (2)0.92150 (16)0.0373 (4)
C90.3064 (2)0.7963 (2)0.65422 (18)0.0312 (4)
C10.5529 (3)0.7644 (2)0.91386 (19)0.0347 (5)
N10.6833 (2)0.7590 (2)0.86615 (17)0.0422 (4)
C40.6108 (2)0.9223 (2)0.76932 (19)0.0354 (5)
C20.4350 (2)0.8266 (2)0.87397 (18)0.0311 (4)
C80.7765 (4)0.7224 (4)1.0854 (3)0.0815 (10)
H8A0.82870.82911.12800.098*
H8B0.79760.68111.14720.098*
N20.8663 (3)0.8554 (3)0.7814 (2)0.0656 (7)
H2A0.943 (3)0.848 (4)0.83610.068*
H2B0.895 (4)0.923 (4)0.7560.068*
C170.4207 (4)1.2497 (4)0.6110 (3)0.0777 (9)
H17A0.32891.16430.55600.117*
H17B0.43721.31660.57130.117*
H17C0.39821.30010.68730.117*
C70.8573 (5)0.6566 (5)0.9903 (4)0.0968 (12)
H7A0.96790.72081.01460.116*
H7B0.86720.56000.98750.116*
U11U22U33U12U13U23
S10.0649 (4)0.0527 (4)0.0599 (4)0.0256 (3)0.0266 (3)0.0369 (3)
Cl10.0493 (4)0.0660 (4)0.0387 (3)0.0006 (3)−0.0040 (3)0.0164 (3)
O10.0412 (10)0.0883 (14)0.0853 (14)0.0094 (9)0.0283 (10)0.0529 (12)
C120.0315 (11)0.0478 (13)0.0337 (11)−0.0002 (9)0.0041 (9)0.0173 (10)
C130.0494 (13)0.0377 (11)0.0354 (12)0.0073 (10)0.0095 (10)0.0139 (10)
C100.0344 (12)0.0419 (12)0.0434 (12)0.0143 (9)0.0070 (10)0.0138 (10)
C150.0362 (12)0.0493 (13)0.0399 (12)0.0006 (10)0.0100 (10)0.0172 (10)
C140.0364 (11)0.0411 (12)0.0380 (12)0.0132 (9)0.0067 (10)0.0184 (10)
C110.0335 (12)0.0581 (15)0.0487 (14)0.0150 (11)0.0029 (11)0.0238 (12)
C160.0721 (18)0.0534 (15)0.0672 (17)0.0148 (13)0.0333 (15)0.0368 (14)
C60.087 (2)0.0748 (19)0.076 (2)0.0578 (17)0.0406 (18)0.0346 (16)
C50.0283 (11)0.0528 (13)0.0365 (11)0.0099 (10)0.0089 (9)0.0153 (10)
O20.0443 (9)0.0480 (9)0.0495 (9)0.0093 (7)0.0181 (8)0.0274 (8)
O30.0466 (10)0.0598 (10)0.0512 (10)0.0043 (8)0.0218 (8)0.0277 (9)
O40.0303 (8)0.0637 (10)0.0541 (10)0.0190 (8)0.0145 (8)0.0241 (9)
C30.0271 (10)0.0319 (10)0.0333 (10)0.0069 (8)0.0085 (9)0.0114 (8)
N30.0285 (9)0.0408 (10)0.0320 (9)0.0012 (8)0.0060 (8)0.0091 (8)
C90.0250 (10)0.0370 (11)0.0313 (10)0.0058 (8)0.0086 (8)0.0151 (9)
C10.0381 (11)0.0283 (10)0.0327 (11)0.0073 (9)0.0098 (9)0.0085 (8)
N10.0406 (10)0.0479 (11)0.0440 (11)0.0222 (9)0.0157 (9)0.0196 (9)
C40.0256 (10)0.0430 (11)0.0332 (11)0.0049 (9)0.0076 (9)0.0141 (9)
C20.0262 (10)0.0330 (10)0.0294 (10)0.0050 (8)0.0082 (8)0.0096 (8)
C80.079 (2)0.125 (3)0.073 (2)0.060 (2)0.0246 (18)0.062 (2)
N20.0324 (11)0.106 (2)0.0749 (17)0.0273 (12)0.0228 (11)0.0482 (15)
C170.092 (2)0.082 (2)0.093 (2)0.0385 (19)0.039 (2)0.059 (2)
C70.095 (3)0.154 (4)0.104 (3)0.088 (3)0.049 (2)0.088 (3)
S1—C11.744 (2)C6—H6B0.9700
S1—C81.802 (3)C5—N21.356 (3)
Cl1—C121.745 (2)C5—C41.361 (3)
O1—C151.224 (3)C5—N11.400 (3)
C12—C111.369 (3)O3—N31.242 (2)
C12—C131.382 (3)O4—N31.242 (2)
C13—C141.384 (3)C3—C21.502 (3)
C13—H130.9300C3—C41.514 (3)
C10—C111.387 (3)C3—C91.531 (3)
C10—C91.390 (3)C3—H30.9800
C10—H100.9300N3—C21.410 (3)
C15—O21.347 (3)C1—C21.362 (3)
C15—C41.449 (3)C1—N11.378 (3)
C14—C91.382 (3)C8—C71.488 (5)
C14—H140.9300C8—H8A0.9700
C11—H110.9300C8—H8B0.9700
C16—O21.450 (3)N2—H2A0.855 (17)
C16—C171.495 (4)N2—H2B0.859 (17)
C16—H16A0.9700C17—H17A0.9600
C16—H16B0.9700C17—H17B0.9600
C6—N11.475 (3)C17—H17C0.9600
C6—C71.482 (4)C7—H7A0.9700
C6—H6A0.9700C7—H7B0.9700
C1—S1—C898.75 (13)C9—C3—H3107.7
C11—C12—C13121.3 (2)O4—N3—O3121.78 (18)
C11—C12—Cl1119.83 (18)O4—N3—C2118.18 (17)
C13—C12—Cl1118.85 (18)O3—N3—C2120.02 (18)
C12—C13—C14118.5 (2)C14—C9—C10118.33 (19)
C12—C13—H13120.7C14—C9—C3120.93 (18)
C14—C13—H13120.7C10—C9—C3120.73 (19)
C11—C10—C9120.8 (2)C2—C1—N1119.40 (19)
C11—C10—H10119.6C2—C1—S1124.77 (16)
C9—C10—H10119.6N1—C1—S1115.80 (16)
O1—C15—O2121.5 (2)C1—N1—C5120.12 (18)
O1—C15—C4126.6 (2)C1—N1—C6116.9 (2)
O2—C15—C4111.94 (18)C5—N1—C6122.2 (2)
C9—C14—C13121.7 (2)C5—C4—C15119.96 (19)
C9—C14—H14119.2C5—C4—C3121.27 (19)
C13—C14—H14119.2C15—C4—C3118.76 (19)
C12—C11—C10119.4 (2)C1—C2—N3119.81 (18)
C12—C11—H11120.3C1—C2—C3123.84 (18)
C10—C11—H11120.3N3—C2—C3116.35 (18)
O2—C16—C17107.0 (2)C7—C8—S1116.0 (3)
O2—C16—H16A110.3C7—C8—H8A108.3
C17—C16—H16A110.3S1—C8—H8A108.3
O2—C16—H16B110.3C7—C8—H8B108.3
C17—C16—H16B110.3S1—C8—H8B108.3
H16A—C16—H16B108.6H8A—C8—H8B107.4
N1—C6—C7113.6 (3)C5—N2—H2A115 (2)
N1—C6—H6A108.8C5—N2—H2B114 (2)
C7—C6—H6A108.8H2A—N2—H2B116 (3)
N1—C6—H6B108.8C16—C17—H17A109.5
C7—C6—H6B108.8C16—C17—H17B109.5
H6A—C6—H6B107.7H17A—C17—H17B109.5
N2—C5—C4124.0 (2)C16—C17—H17C109.5
N2—C5—N1115.0 (2)H17A—C17—H17C109.5
C4—C5—N1121.05 (19)H17B—C17—H17C109.5
C15—O2—C16116.12 (18)C6—C7—C8111.6 (3)
C2—C3—C4109.50 (16)C6—C7—H7A109.3
C2—C3—C9111.93 (15)C8—C7—H7A109.3
C4—C3—C9112.25 (16)C6—C7—H7B109.3
C2—C3—H3107.7C8—C7—H7B109.3
C4—C3—H3107.7H7A—C7—H7B108.0
C11—C12—C13—C14−1.3 (3)C7—C6—N1—C5120.1 (3)
Cl1—C12—C13—C14177.68 (16)N2—C5—C4—C15−9.6 (4)
C12—C13—C14—C90.8 (3)N1—C5—C4—C15172.29 (19)
C13—C12—C11—C100.6 (3)N2—C5—C4—C3170.7 (2)
Cl1—C12—C11—C10−178.39 (17)N1—C5—C4—C3−7.4 (3)
C9—C10—C11—C120.6 (3)O1—C15—C4—C52.2 (4)
O1—C15—O2—C16−0.7 (3)O2—C15—C4—C5−179.4 (2)
C4—C15—O2—C16−179.22 (19)O1—C15—C4—C3−178.1 (2)
C17—C16—O2—C15178.3 (2)O2—C15—C4—C30.3 (3)
C13—C14—C9—C100.4 (3)C2—C3—C4—C520.6 (3)
C13—C14—C9—C3−178.31 (18)C9—C3—C4—C5−104.3 (2)
C11—C10—C9—C14−1.1 (3)C2—C3—C4—C15−159.09 (18)
C11—C10—C9—C3177.56 (19)C9—C3—C4—C1576.0 (2)
C2—C3—C9—C14−61.2 (2)N1—C1—C2—N3179.49 (17)
C4—C3—C9—C1462.4 (2)S1—C1—C2—N3−2.5 (3)
C2—C3—C9—C10120.2 (2)N1—C1—C2—C3−0.9 (3)
C4—C3—C9—C10−116.2 (2)S1—C1—C2—C3177.04 (15)
C8—S1—C1—C2−152.2 (2)O4—N3—C2—C1168.14 (18)
C8—S1—C1—N125.8 (2)O3—N3—C2—C1−13.3 (3)
C2—C1—N1—C517.0 (3)O4—N3—C2—C3−11.5 (3)
S1—C1—N1—C5−161.12 (16)O3—N3—C2—C3167.08 (17)
C2—C1—N1—C6−153.1 (2)C4—C3—C2—C1−16.8 (3)
S1—C1—N1—C628.7 (3)C9—C3—C2—C1108.4 (2)
N2—C5—N1—C1168.8 (2)C4—C3—C2—N3162.84 (16)
C4—C5—N1—C1−12.9 (3)C9—C3—C2—N3−72.0 (2)
N2—C5—N1—C6−21.6 (3)C1—S1—C8—C7−54.3 (3)
C4—C5—N1—C6156.7 (2)N1—C6—C7—C836.1 (5)
C7—C6—N1—C1−70.0 (3)S1—C8—C7—C625.0 (5)
D—H···AD—HH···AD···AD—H···A
N2—H2B···O10.89 (4)1.95 (5)2.680 (4)138 (4)
N2—H2A···O4i0.87 (4)2.16 (4)2.850 (3)137 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2B⋯O10.89 (4)1.95 (5)2.680 (4)138 (4)
N2—H2A⋯O4i0.87 (4)2.16 (4)2.850 (3)137 (4)

Symmetry code: (i) .

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