| Literature DB >> 22058963 |
Hao Chen1, Li Cai, Chaochao Yu, Hongqi Li.
Abstract
The title compound, C(21)H(19)ClF(3)N(3)O(2), has a structure related to other coumarin derivatives that have been used as fluorescent probes of metal ions. The dihedral angle between the coumarin ring system and the chlorobenzene ring is 42.99 (9)°. Intra-molecular hydrogen bonding occurs via N-H⋯O and N-H⋯Cl inter-actions, generating S(7) and S(5) rings, respectively. The crystal packing is stabilized by weak C-H⋯O hydrogen bonds.Entities:
Year: 2011 PMID: 22058963 PMCID: PMC3200584 DOI: 10.1107/S1600536811031916
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H19ClF3N3O2 | |
| Melting point = 423–425 K | |
| Orthorhombic, | Mo |
| Cell parameters from 3770 reflections | |
| θ = 2.6–24.7° | |
| µ = 0.24 mm−1 | |
| Block, orange | |
| 0.20 × 0.20 × 0.18 mm |
| Bruker APEXII CCD diffractometer | 3576 independent reflections |
| Radiation source: fine-focus sealed tube | 3162 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 10369 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 3576 reflections | Δρmax = 0.15 e Å−3 |
| 273 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 1511 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.09 (6) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | −0.0571 (3) | 0.51038 (15) | 0.15673 (9) | 0.0426 (5) | |
| C2 | −0.0012 (3) | 0.46256 (15) | 0.09683 (10) | 0.0479 (5) | |
| H2 | 0.0292 | 0.3913 | 0.0970 | 0.058* | |
| C3 | 0.0088 (3) | 0.51828 (14) | 0.03965 (10) | 0.0450 (5) | |
| H3 | 0.0447 | 0.4842 | 0.0014 | 0.054* | |
| C4 | −0.0343 (2) | 0.62689 (14) | 0.03692 (9) | 0.0382 (4) | |
| C5 | −0.0249 (2) | 0.69109 (14) | −0.01980 (10) | 0.0391 (4) | |
| H5 | 0.0082 | 0.6604 | −0.0595 | 0.047* | |
| C6 | −0.0629 (2) | 0.79729 (14) | −0.01872 (9) | 0.0358 (4) | |
| C7 | −0.1134 (3) | 0.84426 (14) | 0.04343 (9) | 0.0392 (4) | |
| C8 | −0.0900 (2) | 0.67227 (13) | 0.09569 (9) | 0.0366 (4) | |
| C9 | −0.1056 (3) | 0.61729 (14) | 0.15382 (9) | 0.0415 (5) | |
| H9 | −0.1481 | 0.6508 | 0.1912 | 0.050* | |
| C10 | −0.0636 (2) | 0.86150 (14) | −0.08005 (8) | 0.0363 (4) | |
| C11 | 0.1033 (2) | 1.12141 (14) | −0.06355 (9) | 0.0382 (4) | |
| C12 | 0.1722 (3) | 1.18859 (16) | −0.01670 (10) | 0.0471 (5) | |
| C13 | 0.2242 (3) | 1.29033 (17) | −0.03257 (12) | 0.0564 (6) | |
| H13 | 0.2701 | 1.3341 | −0.0003 | 0.068* | |
| C14 | 0.2075 (3) | 1.32630 (17) | −0.09657 (12) | 0.0613 (6) | |
| H14 | 0.2430 | 1.3942 | −0.1080 | 0.074* | |
| C15 | 0.1377 (3) | 1.26061 (16) | −0.14320 (11) | 0.0559 (6) | |
| H15 | 0.1242 | 1.2851 | −0.1862 | 0.067* | |
| C16 | 0.0874 (3) | 1.15921 (15) | −0.12760 (10) | 0.0456 (5) | |
| H16 | 0.0424 | 1.1157 | −0.1603 | 0.055* | |
| C17 | −0.1226 (3) | 0.80735 (15) | −0.14206 (10) | 0.0434 (5) | |
| C18 | 0.0107 (3) | 0.34867 (17) | 0.21991 (12) | 0.0607 (6) | |
| H18A | −0.0171 | 0.3080 | 0.1807 | 0.073* | |
| H18B | −0.0374 | 0.3124 | 0.2578 | 0.073* | |
| C19 | 0.1987 (3) | 0.3531 (2) | 0.22744 (16) | 0.0921 (9) | |
| H19A | 0.2465 | 0.3907 | 0.1907 | 0.138* | |
| H19B | 0.2431 | 0.2823 | 0.2287 | 0.138* | |
| H19C | 0.2266 | 0.3892 | 0.2678 | 0.138* | |
| C20 | −0.1199 (3) | 0.50530 (18) | 0.27618 (10) | 0.0596 (6) | |
| H20A | −0.0763 | 0.5772 | 0.2778 | 0.071* | |
| H20B | −0.0738 | 0.4667 | 0.3135 | 0.071* | |
| C21 | −0.3098 (3) | 0.50846 (19) | 0.28210 (12) | 0.0698 (7) | |
| H21A | −0.3558 | 0.5489 | 0.2462 | 0.105* | |
| H21B | −0.3405 | 0.5411 | 0.3233 | 0.105* | |
| H21C | −0.3535 | 0.4375 | 0.2807 | 0.105* | |
| Cl1 | 0.19498 (10) | 1.14505 (5) | 0.06447 (3) | 0.0753 (2) | |
| F1 | −0.24651 (16) | 0.73715 (9) | −0.13101 (6) | 0.0567 (3) | |
| F2 | 0.00093 (17) | 0.75115 (10) | −0.17132 (6) | 0.0632 (4) | |
| F3 | −0.17985 (19) | 0.87363 (10) | −0.18810 (5) | 0.0661 (4) | |
| N1 | −0.0641 (2) | 0.45457 (13) | 0.21455 (9) | 0.0514 (4) | |
| N2 | −0.0139 (2) | 0.95674 (12) | −0.09268 (8) | 0.0397 (4) | |
| N3 | 0.0552 (2) | 1.01831 (12) | −0.04584 (8) | 0.0437 (4) | |
| H3A | 0.0694 | 0.9952 | −0.0062 | 0.052* | |
| O1 | −0.12920 (18) | 0.77888 (9) | 0.09745 (6) | 0.0415 (3) | |
| O2 | −0.1471 (2) | 0.93702 (10) | 0.05297 (6) | 0.0522 (4) |
| C1 | 0.0369 (11) | 0.0411 (11) | 0.0499 (11) | −0.0028 (9) | −0.0021 (9) | 0.0060 (9) |
| C2 | 0.0502 (13) | 0.0323 (10) | 0.0613 (12) | 0.0059 (10) | 0.0028 (11) | 0.0016 (9) |
| C3 | 0.0496 (12) | 0.0335 (10) | 0.0520 (11) | 0.0050 (9) | 0.0082 (10) | −0.0049 (9) |
| C4 | 0.0382 (11) | 0.0322 (9) | 0.0441 (10) | 0.0007 (8) | 0.0012 (8) | −0.0024 (8) |
| C5 | 0.0382 (11) | 0.0361 (10) | 0.0430 (10) | 0.0023 (8) | 0.0020 (9) | −0.0069 (8) |
| C6 | 0.0337 (10) | 0.0334 (9) | 0.0404 (10) | −0.0007 (8) | 0.0015 (8) | −0.0041 (8) |
| C7 | 0.0395 (11) | 0.0338 (10) | 0.0441 (10) | 0.0006 (9) | 0.0034 (9) | −0.0006 (8) |
| C8 | 0.0356 (11) | 0.0283 (9) | 0.0458 (11) | 0.0003 (8) | −0.0020 (9) | −0.0039 (8) |
| C9 | 0.0448 (12) | 0.0373 (10) | 0.0423 (11) | −0.0002 (9) | 0.0035 (9) | −0.0008 (8) |
| C10 | 0.0359 (11) | 0.0332 (10) | 0.0398 (10) | 0.0001 (8) | −0.0001 (8) | −0.0045 (8) |
| C11 | 0.0341 (11) | 0.0338 (9) | 0.0467 (10) | 0.0001 (8) | 0.0010 (9) | −0.0045 (9) |
| C12 | 0.0439 (12) | 0.0480 (12) | 0.0493 (11) | −0.0006 (9) | −0.0033 (10) | −0.0109 (9) |
| C13 | 0.0489 (14) | 0.0448 (12) | 0.0755 (15) | −0.0057 (11) | 0.0002 (12) | −0.0199 (11) |
| C14 | 0.0652 (17) | 0.0379 (11) | 0.0809 (16) | −0.0099 (11) | 0.0106 (14) | −0.0033 (12) |
| C15 | 0.0653 (15) | 0.0442 (12) | 0.0584 (12) | −0.0021 (11) | 0.0072 (12) | 0.0072 (11) |
| C16 | 0.0494 (12) | 0.0402 (11) | 0.0470 (11) | −0.0022 (9) | 0.0002 (10) | −0.0045 (9) |
| C17 | 0.0439 (12) | 0.0416 (10) | 0.0448 (11) | 0.0006 (10) | 0.0007 (10) | −0.0035 (9) |
| C18 | 0.0596 (15) | 0.0501 (13) | 0.0723 (14) | 0.0051 (12) | 0.0076 (13) | 0.0251 (12) |
| C19 | 0.0581 (18) | 0.098 (2) | 0.120 (2) | 0.0182 (16) | 0.0011 (17) | 0.0512 (19) |
| C20 | 0.0794 (18) | 0.0557 (13) | 0.0437 (12) | 0.0008 (13) | −0.0060 (11) | 0.0080 (10) |
| C21 | 0.0807 (19) | 0.0722 (16) | 0.0566 (14) | 0.0012 (15) | 0.0098 (13) | 0.0013 (12) |
| Cl1 | 0.0938 (5) | 0.0819 (4) | 0.0501 (3) | −0.0075 (4) | −0.0206 (3) | −0.0080 (3) |
| F1 | 0.0522 (7) | 0.0562 (7) | 0.0616 (7) | −0.0130 (6) | −0.0040 (6) | −0.0129 (6) |
| F2 | 0.0581 (8) | 0.0710 (8) | 0.0604 (7) | 0.0048 (7) | 0.0106 (6) | −0.0272 (6) |
| F3 | 0.0926 (11) | 0.0582 (8) | 0.0474 (7) | 0.0008 (7) | −0.0190 (7) | −0.0007 (6) |
| N1 | 0.0567 (12) | 0.0434 (9) | 0.0542 (10) | 0.0047 (9) | 0.0003 (9) | 0.0121 (8) |
| N2 | 0.0408 (10) | 0.0356 (9) | 0.0429 (8) | 0.0006 (7) | 0.0006 (7) | −0.0048 (7) |
| N3 | 0.0537 (11) | 0.0375 (8) | 0.0398 (9) | −0.0064 (8) | −0.0056 (7) | −0.0017 (7) |
| O1 | 0.0534 (9) | 0.0311 (6) | 0.0401 (7) | 0.0056 (6) | 0.0076 (6) | −0.0014 (6) |
| O2 | 0.0747 (11) | 0.0300 (7) | 0.0519 (8) | 0.0090 (7) | 0.0138 (8) | −0.0026 (6) |
| C1—N1 | 1.366 (3) | C13—H13 | 0.9300 |
| C1—C9 | 1.402 (3) | C14—C15 | 1.372 (3) |
| C1—C2 | 1.424 (3) | C14—H14 | 0.9300 |
| C2—C3 | 1.356 (3) | C15—C16 | 1.376 (3) |
| C2—H2 | 0.9300 | C15—H15 | 0.9300 |
| C3—C4 | 1.412 (3) | C16—H16 | 0.9300 |
| C3—H3 | 0.9300 | C17—F3 | 1.331 (2) |
| C4—C8 | 1.392 (3) | C17—F1 | 1.342 (2) |
| C4—C5 | 1.406 (3) | C17—F2 | 1.347 (2) |
| C5—C6 | 1.372 (3) | C18—N1 | 1.465 (3) |
| C5—H5 | 0.9300 | C18—C19 | 1.501 (4) |
| C6—C7 | 1.447 (3) | C18—H18A | 0.9700 |
| C6—C10 | 1.481 (3) | C18—H18B | 0.9700 |
| C7—O2 | 1.215 (2) | C19—H19A | 0.9600 |
| C7—O1 | 1.374 (2) | C19—H19B | 0.9600 |
| C8—C9 | 1.371 (3) | C19—H19C | 0.9600 |
| C8—O1 | 1.380 (2) | C20—N1 | 1.470 (3) |
| C9—H9 | 0.9300 | C20—C21 | 1.513 (4) |
| C10—N2 | 1.289 (2) | C20—H20A | 0.9700 |
| C10—C17 | 1.503 (3) | C20—H20B | 0.9700 |
| C11—C12 | 1.384 (3) | C21—H21A | 0.9600 |
| C11—C16 | 1.387 (3) | C21—H21B | 0.9600 |
| C11—N3 | 1.401 (2) | C21—H21C | 0.9600 |
| C12—C13 | 1.385 (3) | N2—N3 | 1.342 (2) |
| C12—Cl1 | 1.741 (2) | N3—H3A | 0.8600 |
| C13—C14 | 1.378 (3) | ||
| N1—C1—C9 | 121.30 (18) | C14—C15—H15 | 119.3 |
| N1—C1—C2 | 121.56 (18) | C16—C15—H15 | 119.3 |
| C9—C1—C2 | 117.14 (17) | C15—C16—C11 | 120.48 (19) |
| C3—C2—C1 | 121.68 (18) | C15—C16—H16 | 119.8 |
| C3—C2—H2 | 119.2 | C11—C16—H16 | 119.8 |
| C1—C2—H2 | 119.2 | F3—C17—F1 | 106.26 (17) |
| C2—C3—C4 | 121.42 (17) | F3—C17—F2 | 105.71 (17) |
| C2—C3—H3 | 119.3 | F1—C17—F2 | 105.10 (15) |
| C4—C3—H3 | 119.3 | F3—C17—C10 | 113.93 (16) |
| C8—C4—C5 | 118.53 (16) | F1—C17—C10 | 112.88 (16) |
| C8—C4—C3 | 116.23 (16) | F2—C17—C10 | 112.26 (17) |
| C5—C4—C3 | 125.24 (17) | N1—C18—C19 | 112.1 (2) |
| C6—C5—C4 | 122.46 (18) | N1—C18—H18A | 109.2 |
| C6—C5—H5 | 118.8 | C19—C18—H18A | 109.2 |
| C4—C5—H5 | 118.8 | N1—C18—H18B | 109.2 |
| C5—C6—C7 | 118.29 (18) | C19—C18—H18B | 109.2 |
| C5—C6—C10 | 121.36 (17) | H18A—C18—H18B | 107.9 |
| C7—C6—C10 | 120.22 (16) | C18—C19—H19A | 109.5 |
| O2—C7—O1 | 115.49 (16) | C18—C19—H19B | 109.5 |
| O2—C7—C6 | 126.37 (17) | H19A—C19—H19B | 109.5 |
| O1—C7—C6 | 118.12 (15) | C18—C19—H19C | 109.5 |
| C9—C8—O1 | 116.72 (16) | H19A—C19—H19C | 109.5 |
| C9—C8—C4 | 123.65 (17) | H19B—C19—H19C | 109.5 |
| O1—C8—C4 | 119.61 (16) | N1—C20—C21 | 112.3 (2) |
| C8—C9—C1 | 119.79 (17) | N1—C20—H20A | 109.1 |
| C8—C9—H9 | 120.1 | C21—C20—H20A | 109.1 |
| C1—C9—H9 | 120.1 | N1—C20—H20B | 109.1 |
| N2—C10—C6 | 132.33 (16) | C21—C20—H20B | 109.1 |
| N2—C10—C17 | 110.65 (16) | H20A—C20—H20B | 107.9 |
| C6—C10—C17 | 116.90 (16) | C20—C21—H21A | 109.5 |
| C12—C11—C16 | 117.78 (18) | C20—C21—H21B | 109.5 |
| C12—C11—N3 | 120.01 (18) | H21A—C21—H21B | 109.5 |
| C16—C11—N3 | 122.20 (17) | C20—C21—H21C | 109.5 |
| C11—C12—C13 | 121.7 (2) | H21A—C21—H21C | 109.5 |
| C11—C12—Cl1 | 119.64 (16) | H21B—C21—H21C | 109.5 |
| C13—C12—Cl1 | 118.65 (17) | C1—N1—C18 | 121.08 (18) |
| C14—C13—C12 | 119.6 (2) | C1—N1—C20 | 120.98 (17) |
| C14—C13—H13 | 120.2 | C18—N1—C20 | 117.11 (18) |
| C12—C13—H13 | 120.2 | C10—N2—N3 | 121.57 (16) |
| C15—C14—C13 | 119.1 (2) | N2—N3—C11 | 117.85 (16) |
| C15—C14—H14 | 120.4 | N2—N3—H3A | 121.1 |
| C13—C14—H14 | 120.4 | C11—N3—H3A | 121.1 |
| C14—C15—C16 | 121.3 (2) | C7—O1—C8 | 122.86 (14) |
| N1—C1—C2—C3 | −178.8 (2) | Cl1—C12—C13—C14 | 179.90 (18) |
| C9—C1—C2—C3 | 1.5 (3) | C12—C13—C14—C15 | 0.7 (4) |
| C1—C2—C3—C4 | 0.7 (3) | C13—C14—C15—C16 | −1.3 (4) |
| C2—C3—C4—C8 | −1.1 (3) | C14—C15—C16—C11 | 1.2 (3) |
| C2—C3—C4—C5 | 178.8 (2) | C12—C11—C16—C15 | −0.5 (3) |
| C8—C4—C5—C6 | 2.4 (3) | N3—C11—C16—C15 | −179.3 (2) |
| C3—C4—C5—C6 | −177.6 (2) | N2—C10—C17—F3 | −27.1 (2) |
| C4—C5—C6—C7 | 0.3 (3) | C6—C10—C17—F3 | 156.38 (17) |
| C4—C5—C6—C10 | −175.63 (17) | N2—C10—C17—F1 | −148.43 (17) |
| C5—C6—C7—O2 | 178.2 (2) | C6—C10—C17—F1 | 35.1 (2) |
| C10—C6—C7—O2 | −5.8 (3) | N2—C10—C17—F2 | 93.0 (2) |
| C5—C6—C7—O1 | −3.3 (3) | C6—C10—C17—F2 | −83.5 (2) |
| C10—C6—C7—O1 | 172.71 (16) | C9—C1—N1—C18 | −170.4 (2) |
| C5—C4—C8—C9 | 179.41 (19) | C2—C1—N1—C18 | 9.9 (3) |
| C3—C4—C8—C9 | −0.6 (3) | C9—C1—N1—C20 | −1.1 (3) |
| C5—C4—C8—O1 | −2.0 (3) | C2—C1—N1—C20 | 179.2 (2) |
| C3—C4—C8—O1 | 177.93 (18) | C19—C18—N1—C1 | 77.9 (3) |
| O1—C8—C9—C1 | −175.76 (18) | C19—C18—N1—C20 | −91.8 (3) |
| C4—C8—C9—C1 | 2.8 (3) | C21—C20—N1—C1 | 82.7 (3) |
| N1—C1—C9—C8 | 177.09 (18) | C21—C20—N1—C18 | −107.6 (2) |
| C2—C1—C9—C8 | −3.2 (3) | C6—C10—N2—N3 | 0.4 (3) |
| C5—C6—C10—N2 | −140.5 (2) | C17—C10—N2—N3 | −175.39 (17) |
| C7—C6—C10—N2 | 43.6 (3) | C10—N2—N3—C11 | −178.98 (17) |
| C5—C6—C10—C17 | 35.1 (3) | C12—C11—N3—N2 | 178.80 (17) |
| C7—C6—C10—C17 | −140.80 (19) | C16—C11—N3—N2 | −2.4 (3) |
| C16—C11—C12—C13 | −0.1 (3) | O2—C7—O1—C8 | −177.57 (17) |
| N3—C11—C12—C13 | 178.75 (19) | C6—C7—O1—C8 | 3.7 (3) |
| C16—C11—C12—Cl1 | −179.98 (15) | C9—C8—O1—C7 | 177.61 (18) |
| N3—C11—C12—Cl1 | −1.2 (3) | C4—C8—O1—C7 | −1.1 (3) |
| C11—C12—C13—C14 | 0.0 (3) |
| H··· | ||||
| N3—H3A···Cl1 | 0.86 | 2.57 | 2.960 (2) | 109. |
| N3—H3A···O2 | 0.86 | 2.22 | 2.761 (3) | 121. |
| C14—H14···O2i | 0.93 | 2.55 | 3.316 (3) | 140. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3 | 0.86 | 2.57 | 2.960 (2) | 109 |
| N3—H3 | 0.86 | 2.22 | 2.761 (3) | 121 |
| C14—H14⋯O2i | 0.93 | 2.55 | 3.316 (3) | 140 |
Symmetry code: (i) .