| Literature DB >> 22058950 |
Islam Ullah Khan, Muhammad Nadeem Arshad, Hafiz Mubashar-Ur-Rehman, William T A Harrison, Muhammad Baqir Ali.
Abstract
In the title compound, C(18)H(18)N(2)O(4)S·H(2)O, the indole and toluene ring systems are oriented at a dihedral angle of 84.51 (9)°. In the crystal, the components are linked by N-H⋯O, O-H⋯O, C-H⋯O and N-H⋯π inter-actions. These include a short link from the α-C atom of the amino acid fragment.Entities:
Year: 2011 PMID: 22058950 PMCID: PMC3200826 DOI: 10.1107/S1600536811032089
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H18N2O4S·H2O | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1381 reflections |
| θ = 2.4–19.2° | |
| µ = 0.21 mm−1 | |
| β = 98.056 (4)° | Needle, colorless |
| 0.28 × 0.11 × 0.09 mm | |
| Bruker Kappa APEXII CCD diffractometer | 4475 independent reflections |
| Radiation source: fine-focus sealed tube | 2135 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 10939 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 4475 reflections | Δρmax = 0.20 e Å−3 |
| 243 parameters | Δρmin = −0.25 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1951 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.05 (10) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | 0.3845 (4) | 0.3366 (8) | 0.10176 (15) | 0.0401 (8) | |
| C2 | 0.2730 (4) | 0.1527 (8) | 0.08284 (18) | 0.0527 (10) | |
| H2 | 0.2528 | 0.0243 | 0.1113 | 0.063* | |
| C3 | 0.1902 (5) | 0.1612 (9) | 0.0202 (2) | 0.0679 (12) | |
| H3 | 0.1150 | 0.0358 | 0.0069 | 0.081* | |
| C4 | 0.2171 (5) | 0.3511 (11) | −0.02263 (17) | 0.0619 (11) | |
| C5 | 0.3258 (5) | 0.5359 (10) | −0.0017 (2) | 0.0675 (12) | |
| H5 | 0.3435 | 0.6676 | −0.0296 | 0.081* | |
| C6 | 0.4098 (4) | 0.5318 (8) | 0.05980 (19) | 0.0561 (10) | |
| H6 | 0.4832 | 0.6597 | 0.0731 | 0.067* | |
| C7 | 0.2547 (4) | 0.3994 (6) | 0.24734 (14) | 0.0352 (8) | |
| H7 | 0.2140 | 0.2592 | 0.2187 | 0.042* | |
| C8 | 0.1348 (5) | 0.6132 (8) | 0.23914 (16) | 0.0452 (10) | |
| C9 | 0.2837 (4) | 0.2991 (7) | 0.31717 (14) | 0.0450 (9) | |
| H9A | 0.1823 | 0.2471 | 0.3298 | 0.054* | |
| H9B | 0.3516 | 0.1498 | 0.3187 | 0.054* | |
| C10 | 0.3599 (5) | 0.4909 (7) | 0.36487 (16) | 0.0454 (9) | |
| C11 | 0.2860 (5) | 0.6835 (8) | 0.39356 (18) | 0.0585 (11) | |
| H11 | 0.1769 | 0.7169 | 0.3868 | 0.070* | |
| C12 | 0.5453 (6) | 0.7203 (8) | 0.43133 (18) | 0.0552 (11) | |
| C13 | 0.5242 (5) | 0.5127 (7) | 0.38869 (15) | 0.0451 (9) | |
| C14 | 0.6611 (5) | 0.3742 (8) | 0.37809 (17) | 0.0539 (10) | |
| H14 | 0.6522 | 0.2370 | 0.3497 | 0.065* | |
| C15 | 0.8074 (6) | 0.4441 (8) | 0.4102 (2) | 0.0704 (13) | |
| H15 | 0.8977 | 0.3517 | 0.4037 | 0.084* | |
| C16 | 0.8233 (6) | 0.6528 (10) | 0.4526 (2) | 0.0782 (14) | |
| H16 | 0.9239 | 0.6974 | 0.4736 | 0.094* | |
| C17 | 0.6930 (6) | 0.7908 (9) | 0.46353 (18) | 0.0725 (14) | |
| H17 | 0.7031 | 0.9285 | 0.4918 | 0.087* | |
| C18 | 0.1307 (5) | 0.3506 (12) | −0.09171 (16) | 0.0977 (16) | |
| H18A | 0.0896 | 0.5178 | −0.1027 | 0.147* | |
| H18B | 0.0439 | 0.2311 | −0.0952 | 0.147* | |
| H18C | 0.2039 | 0.3026 | −0.1208 | 0.147* | |
| S1 | 0.49606 (10) | 0.32979 (18) | 0.17916 (4) | 0.0446 (2) | |
| N1 | 0.4035 (3) | 0.4923 (6) | 0.22720 (13) | 0.0402 (7) | |
| H1N | 0.413 (4) | 0.659 (7) | 0.2271 (15) | 0.048* | |
| N2 | 0.3962 (5) | 0.8178 (7) | 0.43322 (15) | 0.0681 (11) | |
| H2N | 0.375 (5) | 0.941 (8) | 0.452 (2) | 0.082* | |
| O1 | 0.6432 (3) | 0.4579 (5) | 0.17601 (12) | 0.0647 (8) | |
| O2 | 0.4980 (3) | 0.0709 (4) | 0.20122 (12) | 0.0553 (7) | |
| O3 | −0.0007 (3) | 0.5429 (6) | 0.25925 (15) | 0.0744 (8) | |
| H3O | −0.0566 | 0.6686 | 0.2623 | 0.112* | |
| O4 | 0.1563 (3) | 0.8175 (5) | 0.21751 (12) | 0.0623 (7) | |
| O5 | 0.8218 (3) | 0.9515 (6) | 0.26435 (15) | 0.1120 (13) | |
| H1W | 0.7260 | 0.9876 | 0.2425 | 0.134* | |
| H2W | 0.8393 | 0.9747 | 0.3075 | 0.134* |
| C1 | 0.0351 (19) | 0.042 (2) | 0.0446 (19) | 0.002 (2) | 0.0098 (15) | 0.000 (2) |
| C2 | 0.048 (3) | 0.061 (3) | 0.048 (2) | −0.004 (2) | 0.004 (2) | 0.000 (2) |
| C3 | 0.051 (3) | 0.087 (4) | 0.063 (3) | −0.008 (3) | 0.000 (2) | −0.018 (3) |
| C4 | 0.058 (3) | 0.090 (3) | 0.039 (2) | 0.032 (3) | 0.009 (2) | −0.003 (3) |
| C5 | 0.075 (3) | 0.075 (3) | 0.054 (3) | 0.010 (3) | 0.018 (3) | 0.015 (3) |
| C6 | 0.054 (3) | 0.057 (3) | 0.057 (3) | −0.004 (2) | 0.006 (2) | 0.007 (2) |
| C7 | 0.036 (2) | 0.030 (2) | 0.0386 (19) | −0.0023 (15) | 0.0010 (15) | −0.0027 (14) |
| C8 | 0.044 (3) | 0.043 (2) | 0.045 (2) | 0.0024 (19) | −0.0057 (19) | 0.005 (2) |
| C9 | 0.052 (2) | 0.036 (2) | 0.047 (2) | 0.0024 (19) | 0.0053 (17) | 0.0048 (19) |
| C10 | 0.063 (3) | 0.036 (2) | 0.037 (2) | 0.0040 (19) | 0.009 (2) | 0.0035 (18) |
| C11 | 0.075 (3) | 0.054 (3) | 0.044 (2) | 0.011 (2) | 0.000 (2) | 0.010 (2) |
| C12 | 0.083 (3) | 0.045 (2) | 0.036 (2) | −0.002 (2) | 0.001 (2) | 0.0037 (18) |
| C13 | 0.071 (3) | 0.035 (2) | 0.0279 (19) | 0.006 (2) | 0.0029 (19) | 0.0029 (17) |
| C14 | 0.064 (3) | 0.048 (3) | 0.048 (2) | −0.004 (2) | 0.003 (2) | −0.005 (2) |
| C15 | 0.070 (3) | 0.077 (3) | 0.064 (3) | −0.001 (2) | 0.007 (2) | −0.001 (2) |
| C16 | 0.095 (4) | 0.081 (4) | 0.053 (3) | −0.030 (3) | −0.008 (3) | 0.002 (3) |
| C17 | 0.121 (4) | 0.053 (3) | 0.041 (2) | −0.021 (3) | 0.003 (3) | −0.004 (2) |
| C18 | 0.091 (3) | 0.161 (5) | 0.040 (2) | 0.040 (4) | 0.006 (2) | −0.013 (3) |
| S1 | 0.0341 (5) | 0.0464 (6) | 0.0523 (5) | 0.0018 (5) | 0.0027 (4) | 0.0029 (6) |
| N1 | 0.0448 (19) | 0.0351 (17) | 0.0408 (17) | −0.0059 (14) | 0.0063 (14) | −0.0042 (15) |
| N2 | 0.115 (3) | 0.045 (2) | 0.044 (2) | 0.018 (3) | 0.008 (2) | −0.006 (2) |
| O1 | 0.0332 (16) | 0.084 (2) | 0.0765 (19) | −0.0112 (14) | 0.0066 (14) | 0.0007 (16) |
| O2 | 0.0540 (18) | 0.0403 (16) | 0.0704 (17) | 0.0153 (13) | 0.0050 (14) | 0.0139 (14) |
| O3 | 0.0496 (19) | 0.077 (2) | 0.100 (2) | 0.0180 (15) | 0.0216 (17) | 0.0269 (19) |
| O4 | 0.0631 (17) | 0.0382 (15) | 0.0824 (17) | 0.0088 (18) | −0.0015 (13) | 0.0116 (18) |
| O5 | 0.081 (2) | 0.143 (3) | 0.104 (2) | 0.065 (2) | −0.0165 (19) | −0.035 (2) |
| C1—C2 | 1.369 (5) | C11—H11 | 0.9300 |
| C1—C6 | 1.384 (5) | C12—N2 | 1.366 (5) |
| C1—S1 | 1.753 (3) | C12—C17 | 1.383 (6) |
| C2—C3 | 1.395 (5) | C12—C13 | 1.403 (5) |
| C2—H2 | 0.9300 | C13—C14 | 1.411 (5) |
| C3—C4 | 1.379 (6) | C14—C15 | 1.372 (5) |
| C3—H3 | 0.9300 | C14—H14 | 0.9300 |
| C4—C5 | 1.366 (6) | C15—C16 | 1.404 (6) |
| C4—C18 | 1.522 (5) | C15—H15 | 0.9300 |
| C5—C6 | 1.377 (5) | C16—C17 | 1.365 (6) |
| C5—H5 | 0.9300 | C16—H16 | 0.9300 |
| C6—H6 | 0.9300 | C17—H17 | 0.9300 |
| C7—N1 | 1.465 (4) | C18—H18A | 0.9600 |
| C7—C8 | 1.506 (5) | C18—H18B | 0.9600 |
| C7—C9 | 1.536 (4) | C18—H18C | 0.9600 |
| C7—H7 | 0.9800 | S1—O1 | 1.423 (2) |
| C8—O4 | 1.188 (4) | S1—O2 | 1.435 (2) |
| C8—O3 | 1.327 (4) | S1—N1 | 1.601 (3) |
| C9—C10 | 1.497 (5) | N1—H1N | 0.88 (4) |
| C9—H9A | 0.9700 | N2—H2N | 0.79 (4) |
| C9—H9B | 0.9700 | O3—H3O | 0.8200 |
| C10—C11 | 1.370 (5) | O5—H1W | 0.8926 |
| C10—C13 | 1.412 (5) | O5—H2W | 0.9002 |
| C11—N2 | 1.354 (5) | ||
| C2—C1—C6 | 120.1 (3) | N2—C12—C17 | 131.2 (4) |
| C2—C1—S1 | 120.7 (3) | N2—C12—C13 | 105.9 (4) |
| C6—C1—S1 | 119.2 (3) | C17—C12—C13 | 122.8 (4) |
| C1—C2—C3 | 118.9 (4) | C12—C13—C14 | 117.8 (4) |
| C1—C2—H2 | 120.6 | C12—C13—C10 | 108.5 (4) |
| C3—C2—H2 | 120.6 | C14—C13—C10 | 133.7 (3) |
| C4—C3—C2 | 121.6 (4) | C15—C14—C13 | 119.3 (4) |
| C4—C3—H3 | 119.2 | C15—C14—H14 | 120.3 |
| C2—C3—H3 | 119.2 | C13—C14—H14 | 120.3 |
| C5—C4—C3 | 118.1 (4) | C14—C15—C16 | 121.1 (4) |
| C5—C4—C18 | 121.1 (5) | C14—C15—H15 | 119.4 |
| C3—C4—C18 | 120.8 (5) | C16—C15—H15 | 119.4 |
| C4—C5—C6 | 121.5 (4) | C17—C16—C15 | 120.8 (5) |
| C4—C5—H5 | 119.2 | C17—C16—H16 | 119.6 |
| C6—C5—H5 | 119.2 | C15—C16—H16 | 119.6 |
| C5—C6—C1 | 119.7 (4) | C16—C17—C12 | 118.2 (5) |
| C5—C6—H6 | 120.1 | C16—C17—H17 | 120.9 |
| C1—C6—H6 | 120.1 | C12—C17—H17 | 120.9 |
| N1—C7—C8 | 108.1 (3) | C4—C18—H18A | 109.5 |
| N1—C7—C9 | 110.9 (3) | C4—C18—H18B | 109.5 |
| C8—C7—C9 | 112.2 (3) | H18A—C18—H18B | 109.5 |
| N1—C7—H7 | 108.5 | C4—C18—H18C | 109.5 |
| C8—C7—H7 | 108.5 | H18A—C18—H18C | 109.5 |
| C9—C7—H7 | 108.5 | H18B—C18—H18C | 109.5 |
| O4—C8—O3 | 123.8 (4) | O1—S1—O2 | 119.49 (16) |
| O4—C8—C7 | 125.5 (4) | O1—S1—N1 | 106.46 (16) |
| O3—C8—C7 | 110.7 (3) | O2—S1—N1 | 106.77 (15) |
| C10—C9—C7 | 113.4 (3) | O1—S1—C1 | 107.97 (16) |
| C10—C9—H9A | 108.9 | O2—S1—C1 | 107.19 (18) |
| C7—C9—H9A | 108.9 | N1—S1—C1 | 108.60 (15) |
| C10—C9—H9B | 108.9 | C7—N1—S1 | 121.1 (2) |
| C7—C9—H9B | 108.9 | C7—N1—H1N | 114 (2) |
| H9A—C9—H9B | 107.7 | S1—N1—H1N | 119 (2) |
| C11—C10—C13 | 105.8 (3) | C11—N2—C12 | 110.2 (4) |
| C11—C10—C9 | 127.4 (4) | C11—N2—H2N | 123 (3) |
| C13—C10—C9 | 126.8 (3) | C12—N2—H2N | 126 (3) |
| N2—C11—C10 | 109.6 (4) | C8—O3—H3O | 109.5 |
| N2—C11—H11 | 125.2 | H1W—O5—H2W | 119.5 |
| C10—C11—H11 | 125.2 | ||
| C6—C1—C2—C3 | 2.2 (5) | C9—C10—C13—C12 | 178.8 (3) |
| S1—C1—C2—C3 | −178.1 (3) | C11—C10—C13—C14 | 180.0 (4) |
| C1—C2—C3—C4 | −0.6 (6) | C9—C10—C13—C14 | −1.0 (6) |
| C2—C3—C4—C5 | −1.2 (6) | C12—C13—C14—C15 | 1.0 (5) |
| C2—C3—C4—C18 | 177.4 (4) | C10—C13—C14—C15 | −179.2 (4) |
| C3—C4—C5—C6 | 1.5 (6) | C13—C14—C15—C16 | −0.8 (6) |
| C18—C4—C5—C6 | −177.1 (4) | C14—C15—C16—C17 | 0.5 (6) |
| C4—C5—C6—C1 | 0.0 (6) | C15—C16—C17—C12 | −0.4 (6) |
| C2—C1—C6—C5 | −2.0 (5) | N2—C12—C17—C16 | 178.8 (4) |
| S1—C1—C6—C5 | 178.4 (3) | C13—C12—C17—C16 | 0.6 (6) |
| N1—C7—C8—O4 | 2.9 (5) | C2—C1—S1—O1 | 153.8 (3) |
| C9—C7—C8—O4 | 125.5 (4) | C6—C1—S1—O1 | −26.6 (3) |
| N1—C7—C8—O3 | −177.4 (3) | C2—C1—S1—O2 | 23.8 (3) |
| C9—C7—C8—O3 | −54.8 (4) | C6—C1—S1—O2 | −156.5 (3) |
| N1—C7—C9—C10 | 55.8 (4) | C2—C1—S1—N1 | −91.2 (3) |
| C8—C7—C9—C10 | −65.2 (4) | C6—C1—S1—N1 | 88.5 (3) |
| C7—C9—C10—C11 | 82.0 (4) | C8—C7—N1—S1 | −132.1 (3) |
| C7—C9—C10—C13 | −96.8 (4) | C9—C7—N1—S1 | 104.5 (3) |
| C13—C10—C11—N2 | −0.3 (4) | O1—S1—N1—C7 | −173.1 (3) |
| C9—C10—C11—N2 | −179.3 (3) | O2—S1—N1—C7 | −44.4 (3) |
| N2—C12—C13—C14 | −179.5 (3) | C1—S1—N1—C7 | 70.8 (3) |
| C17—C12—C13—C14 | −0.9 (5) | C10—C11—N2—C12 | 0.7 (4) |
| N2—C12—C13—C10 | 0.6 (4) | C17—C12—N2—C11 | −179.3 (4) |
| C17—C12—C13—C10 | 179.2 (4) | C13—C12—N2—C11 | −0.8 (4) |
| C11—C10—C13—C12 | −0.2 (4) |
| Cg3 is the centroid of the C12–C17 ring. |
| H··· | ||||
| N1—H1N···O2i | 0.88 (4) | 2.37 (4) | 3.208 (4) | 160 (3) |
| N2—H2N···Cg3ii | 0.79 (4) | 2.85 (4) | 3.480 (4) | 139 (4) |
| O3—H3O···O5iii | 0.82 | 1.81 | 2.629 (4) | 177 |
| C7—H7···O4iv | 0.98 | 2.37 | 3.205 (4) | 143 |
| C18—H18C···O1v | 0.96 | 2.59 | 3.456 (5) | 151 |
| O5—H1W···O2i | 0.89 | 2.05 | 2.935 (4) | 174 |
Hydrogen-bond geometry (Å, °)
Cg3 is the centroid of the C12–C17 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.88 (4) | 2.37 (4) | 3.208 (4) | 160 (3) |
| N2—H2 | 0.79 (4) | 2.85 (4) | 3.480 (4) | 139 (4) |
| O3—H3 | 0.82 | 1.81 | 2.629 (4) | 177 |
| C7—H7⋯O4iv | 0.98 | 2.37 | 3.205 (4) | 143 |
| C18—H18 | 0.96 | 2.59 | 3.456 (5) | 151 |
| O5—H1 | 0.89 | 2.05 | 2.935 (4) | 174 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .