Literature DB >> 22058912

A centrosymmetric monoclinic polymorph of N,N-bis-(pyridin-3-yl-methyl-idene)benzene-1,4-diamine.

Kwang Ha1.   

Abstract

The complete molecule of the title compound, C(18)H(14)N(4), is generated by the application of a centre of inversion. The dihedral angle between the central benzene ring and the pyridine ring is 31.88 (7)°. In the crystal, mol-ecules are stacked in columns along the c axis and several inter-molecular π-π inter-actions are present between the six-membered rings, the shortest centroid-centroid distance being 3.937 (2) Å. The structure reported herein represents a centrosymmetric polymorph of the previously reported non-centrosymmetric (P2(1)) form [Kim et al. (2005 ▶). Bull. Korean Chem. Soc.26, 892-898].

Entities:  

Year:  2011        PMID: 22058912      PMCID: PMC3200937          DOI: 10.1107/S1600536811030789

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of N 1,N 4-bis­(pyridin-3-yl­methyl­ene)benzene-1,4-diamine, see: Kim et al. (2005 ▶). For the crystal structure of N 1,N 4-bis­(pyridin-2-yl­methyl­ene)benzene-1,4-diamine, see: Chanda et al. (2002 ▶); Ball et al. (2004 ▶).

Experimental

Crystal data

C18H14N4 M = 286.33 Monoclinic, a = 16.622 (6) Å b = 6.171 (2) Å c = 7.159 (2) Å β = 95.732 (8)° V = 730.6 (4) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 200 K 0.22 × 0.14 × 0.11 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.825, T max = 1.000 5128 measured reflections 1790 independent reflections 1027 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.152 S = 1.03 1790 reflections 100 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.24 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811030789/tk2772sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811030789/tk2772Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811030789/tk2772Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H14N4F(000) = 300
Mr = 286.33Dx = 1.301 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1327 reflections
a = 16.622 (6) Åθ = 2.5–28.2°
b = 6.171 (2) ŵ = 0.08 mm1
c = 7.159 (2) ÅT = 200 K
β = 95.732 (8)°Plate, yellow
V = 730.6 (4) Å30.22 × 0.14 × 0.11 mm
Z = 2
Bruker SMART 1000 CCD diffractometer1790 independent reflections
Radiation source: fine-focus sealed tube1027 reflections with I > 2σ(I)
graphiteRint = 0.049
φ and ω scansθmax = 28.3°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −22→19
Tmin = 0.825, Tmax = 1.000k = −8→8
5128 measured reflectionsl = −8→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.152H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.064P)2 + 0.0036P] where P = (Fo2 + 2Fc2)/3
1790 reflections(Δ/σ)max < 0.001
100 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.40327 (10)0.2126 (3)0.3182 (2)0.0434 (5)
N20.16109 (9)0.0893 (2)0.4230 (2)0.0296 (4)
C10.32643 (12)0.1772 (3)0.3548 (3)0.0374 (5)
H10.30910.03100.36220.045*
C20.27031 (11)0.3394 (3)0.3825 (3)0.0298 (5)
C30.29604 (12)0.5530 (3)0.3732 (3)0.0426 (6)
H30.26020.66900.39220.051*
C40.37490 (13)0.5940 (3)0.3356 (3)0.0501 (6)
H40.39380.73870.32820.060*
C50.42572 (13)0.4208 (3)0.3092 (3)0.0439 (6)
H50.47950.45140.28310.053*
C60.18734 (11)0.2849 (3)0.4232 (3)0.0300 (5)
H60.15200.39900.45070.036*
C70.07963 (11)0.0508 (3)0.4617 (2)0.0264 (4)
C80.06382 (11)−0.1381 (3)0.5601 (2)0.0293 (5)
H80.1070−0.23330.60060.035*
C90.01465 (11)0.1882 (3)0.4004 (2)0.0286 (4)
H90.02430.31580.33180.034*
U11U22U33U12U13U23
N10.0308 (10)0.0441 (11)0.0568 (12)0.0014 (8)0.0123 (8)0.0005 (8)
N20.0263 (9)0.0297 (9)0.0338 (8)−0.0027 (7)0.0080 (6)0.0001 (7)
C10.0320 (12)0.0327 (11)0.0488 (12)−0.0006 (8)0.0108 (9)0.0010 (9)
C20.0266 (10)0.0296 (10)0.0337 (10)−0.0018 (8)0.0057 (8)−0.0005 (8)
C30.0331 (12)0.0279 (11)0.0688 (14)0.0000 (9)0.0149 (10)−0.0012 (10)
C40.0388 (13)0.0348 (12)0.0790 (17)−0.0103 (10)0.0176 (11)0.0000 (11)
C50.0288 (11)0.0456 (13)0.0586 (13)−0.0069 (10)0.0113 (10)0.0003 (10)
C60.0261 (10)0.0307 (11)0.0338 (10)0.0001 (8)0.0060 (8)−0.0016 (8)
C70.0248 (10)0.0278 (10)0.0274 (9)−0.0017 (7)0.0063 (7)−0.0026 (7)
C80.0273 (10)0.0284 (10)0.0325 (10)0.0003 (8)0.0038 (8)0.0007 (8)
C90.0310 (11)0.0264 (10)0.0288 (9)−0.0011 (8)0.0048 (8)0.0018 (7)
N1—C51.341 (3)C4—C51.387 (3)
N1—C11.347 (2)C4—H40.9500
N2—C61.283 (2)C5—H50.9500
N2—C71.429 (2)C6—H60.9500
C1—C21.396 (3)C7—C81.401 (2)
C1—H10.9500C7—C91.408 (3)
C2—C31.389 (3)C8—C9i1.396 (3)
C2—C61.476 (3)C8—H80.9500
C3—C41.387 (3)C9—C8i1.396 (3)
C3—H30.9500C9—H90.9500
C5—N1—C1116.01 (18)N1—C5—H5118.1
C6—N2—C7118.98 (16)C4—C5—H5118.1
N1—C1—C2124.86 (18)N2—C6—C2122.54 (17)
N1—C1—H1117.6N2—C6—H6118.7
C2—C1—H1117.6C2—C6—H6118.7
C3—C2—C1117.39 (18)C8—C7—C9118.75 (16)
C3—C2—C6121.57 (17)C8—C7—N2117.70 (16)
C1—C2—C6121.03 (17)C9—C7—N2123.50 (16)
C4—C3—C2118.94 (19)C9i—C8—C7120.79 (16)
C4—C3—H3120.5C9i—C8—H8119.6
C2—C3—H3120.5C7—C8—H8119.6
C5—C4—C3119.1 (2)C8i—C9—C7120.45 (17)
C5—C4—H4120.5C8i—C9—H9119.8
C3—C4—H4120.5C7—C9—H9119.8
N1—C5—C4123.7 (2)
C5—N1—C1—C20.2 (3)C3—C2—C6—N2176.31 (18)
N1—C1—C2—C3−0.5 (3)C1—C2—C6—N2−4.7 (3)
N1—C1—C2—C6−179.58 (18)C6—N2—C7—C8−145.41 (17)
C1—C2—C3—C40.5 (3)C6—N2—C7—C937.0 (2)
C6—C2—C3—C4179.57 (19)C9—C7—C8—C9i−1.0 (3)
C2—C3—C4—C5−0.2 (3)N2—C7—C8—C9i−178.72 (16)
C1—N1—C5—C40.2 (3)C8—C7—C9—C8i1.0 (3)
C3—C4—C5—N1−0.2 (4)N2—C7—C9—C8i178.58 (16)
C7—N2—C6—C2−179.26 (16)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Binuclear rhenium(I) complexes with bridging [2.2]paracyclophane-diimine ligands: probing electronic coupling through pi-pi interactions.

Authors:  P J Ball; Tanya Rarog Shtoyko; Jeanette A Krause Bauer; Warren J Oldham; William B Connick
Journal:  Inorg Chem       Date:  2004-01-26       Impact factor: 5.165

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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