Literature DB >> 22058881

catena-Poly[copper(I)-bis-[μ-3-(1H-imidazol-2-yl)pyridine]-copper(I)-di-μ-iodido].

Qing-Guang Zhan1.   

Abstract

The title polymeric compound, [Cu(2)I(2)(C(8)H(7)N(3))(2)](n) [C(8)H(7)N(3) = 3-(1H-imidazol-2-yl)pyridine (HIPy), where HIPy comes from the in situ deca-rboxylation of 2-(pyridin-3-yl)-1H-imidazole-4,5-dicarb-oxy-lic acid (H(3)PyIDC)], was obtained under solvo-thermal conditions. Each Cu(I) cation is in a distorted tetra-hedral coordination environment defined by two iodide anions and two nitro-gen atoms from two individual HIPy ligands. Two Cu(I) atoms are connected by two HIPy ligands to form a dimer and these dimers are further bridged through the iodide atoms, leading to a chain structure extending parallel to [100]. Moreover, inter-molecular N-H⋯I hydrogen bonds and weak π-π stacking inter-actions [centroid⋯centroid distances of 3.809 (4) Å, an inter-planar separation of 3.345 (3) Å and a ring slippage of 1.822 Å] between pyridyl rings link the chains into a two-dimensional supra-molecular network in the ac plane.

Entities:  

Year:  2011        PMID: 22058881      PMCID: PMC3200664          DOI: 10.1107/S1600536811033605

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background on the deca­rboxylation of N-heterocyclic carb­oxy­lic acid ligands, see: Chen & Tong (2007 ▶); Sun et al. (2006 ▶); Yigit et al. (2006 ▶); Zhong et al. (2010 ▶).

Experimental

Crystal data

[Cu2I2(C8H7N3)2] M = 671.22 Triclinic, a = 8.141 (3) Å b = 8.306 (3) Å c = 8.816 (5) Å α = 114.683 (6)° β = 101.989 (5)° γ = 108.258 (4)° V = 473.1 (4) Å3 Z = 1 Mo Kα radiation μ = 5.52 mm−1 T = 298 K 0.35 × 0.32 × 0.30 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (APEX2; Bruker, 2004 ▶) T min = 0.248, T max = 0.288 2452 measured reflections 1682 independent reflections 1506 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.080 S = 1.06 1682 reflections 118 parameters H-atom parameters constrained Δρmax = 0.86 e Å−3 Δρmin = −0.69 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2; data reduction: APEX2; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶); PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811033605/zl2401sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033605/zl2401Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2I2(C8H7N3)2]Z = 1
Mr = 671.22F(000) = 316
Triclinic, P1Dx = 2.356 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.141 (3) ÅCell parameters from 1252 reflections
b = 8.306 (3) Åθ = 2.8–26.8°
c = 8.816 (5) ŵ = 5.52 mm1
α = 114.683 (6)°T = 298 K
β = 101.989 (5)°Block, yellow
γ = 108.258 (4)°0.35 × 0.32 × 0.30 mm
V = 473.1 (4) Å3
Bruker SMART APEXII CCD area-detector diffractometer1682 independent reflections
Radiation source: fine-focus sealed tube1506 reflections with I > 2σ(I)
graphiteRint = 0.018
φ and ω scansθmax = 25.2°, θmin = 2.8°
Absorption correction: multi-scan (APEX2; Bruker, 2004)h = −8→9
Tmin = 0.248, Tmax = 0.288k = −9→5
2452 measured reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0418P)2 + 0.3135P] where P = (Fo2 + 2Fc2)/3
1682 reflections(Δ/σ)max = 0.001
118 parametersΔρmax = 0.86 e Å3
0 restraintsΔρmin = −0.69 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I1−0.63541 (5)0.55664 (5)−0.19170 (4)0.03979 (15)
Cu1−0.29230 (10)0.58503 (11)−0.03571 (10)0.0494 (2)
N1−0.1172 (6)0.8746 (7)0.1128 (6)0.0359 (10)
N20.0984 (6)1.1683 (7)0.3412 (6)0.0410 (10)
H20.19901.25840.43620.049*
C50.2418 (7)0.9476 (8)0.4986 (7)0.0387 (12)
H50.23851.05530.58910.046*
C60.3354 (7)0.8513 (9)0.5428 (7)0.0398 (12)
H60.39340.89060.66340.048*
C70.3418 (7)0.6968 (8)0.4067 (7)0.0379 (12)
H70.40390.63170.43840.045*
C30.0440 (7)0.9714 (7)0.2574 (7)0.0329 (11)
C1−0.1648 (7)1.0191 (8)0.1087 (7)0.0371 (12)
H1−0.27130.99510.02200.044*
C2−0.0336 (8)1.2007 (8)0.2495 (7)0.0414 (13)
H2A−0.03301.32210.27810.050*
C40.1521 (7)0.8819 (7)0.3165 (7)0.0324 (11)
C80.1698 (7)0.7266 (7)0.1884 (7)0.0343 (11)
H80.11350.68460.06680.041*
N30.2635 (6)0.6336 (6)0.2299 (6)0.0364 (10)
U11U22U33U12U13U23
I10.0394 (2)0.0415 (2)0.0382 (2)0.02226 (17)0.01033 (16)0.01990 (18)
Cu10.0506 (4)0.0349 (4)0.0442 (4)0.0235 (3)0.0051 (3)0.0086 (3)
N10.035 (2)0.038 (3)0.037 (2)0.020 (2)0.0167 (19)0.018 (2)
N20.039 (2)0.034 (3)0.042 (3)0.015 (2)0.013 (2)0.016 (2)
C50.036 (3)0.039 (3)0.038 (3)0.016 (2)0.018 (2)0.016 (3)
C60.039 (3)0.051 (3)0.030 (3)0.021 (3)0.014 (2)0.020 (3)
C70.034 (3)0.040 (3)0.045 (3)0.017 (2)0.016 (2)0.026 (3)
C30.033 (3)0.030 (3)0.035 (3)0.016 (2)0.015 (2)0.014 (2)
C10.039 (3)0.039 (3)0.040 (3)0.023 (3)0.017 (2)0.022 (3)
C20.053 (3)0.036 (3)0.050 (3)0.028 (3)0.026 (3)0.025 (3)
C40.030 (2)0.027 (3)0.037 (3)0.013 (2)0.015 (2)0.013 (2)
C80.033 (3)0.032 (3)0.033 (3)0.018 (2)0.011 (2)0.011 (2)
N30.033 (2)0.034 (2)0.039 (2)0.017 (2)0.0118 (19)0.016 (2)
I1—Cu12.7331 (12)C6—C71.368 (8)
I1—Cu1i2.7887 (14)C6—H60.9300
Cu1—N11.994 (4)C7—N31.345 (7)
Cu1—N3ii2.030 (4)C7—H70.9300
Cu1—I1i2.7887 (14)C3—C41.464 (7)
N1—C31.335 (6)C1—C21.353 (7)
N1—C11.384 (7)C1—H10.9300
N2—C31.348 (7)C2—H2A0.9300
N2—C21.372 (7)C4—C81.388 (7)
N2—H20.8600C8—N31.342 (6)
C5—C61.376 (8)C8—H80.9300
C5—C41.392 (7)N3—Cu1ii2.030 (4)
C5—H50.9300
Cu1—I1—Cu1i79.47 (3)N3—C7—H7118.1
N1—Cu1—N3ii127.88 (17)C6—C7—H7118.1
N1—Cu1—I1105.56 (12)N1—C3—N2110.0 (4)
N3ii—Cu1—I1106.58 (12)N1—C3—C4126.1 (5)
N1—Cu1—I1i109.74 (13)N2—C3—C4123.8 (4)
N3ii—Cu1—I1i103.36 (13)C2—C1—N1110.0 (5)
I1—Cu1—I1i100.53 (3)C2—C1—H1125.0
C3—N1—C1105.7 (4)N1—C1—H1125.0
C3—N1—Cu1128.9 (4)C1—C2—N2105.7 (5)
C1—N1—Cu1123.9 (3)C1—C2—H2A127.2
C3—N2—C2108.5 (4)N2—C2—H2A127.2
C3—N2—H2125.7C8—C4—C5117.6 (5)
C2—N2—H2125.7C8—C4—C3119.7 (5)
C6—C5—C4119.1 (5)C5—C4—C3122.6 (5)
C6—C5—H5120.4N3—C8—C4123.8 (5)
C4—C5—H5120.4N3—C8—H8118.1
C7—C6—C5119.0 (5)C4—C8—H8118.1
C7—C6—H6120.5C8—N3—C7116.6 (4)
C5—C6—H6120.5C8—N3—Cu1ii121.6 (3)
N3—C7—C6123.8 (5)C7—N3—Cu1ii121.8 (4)
Cu1i—I1—Cu1—N1−114.10 (13)C3—N1—C1—C2−0.1 (6)
Cu1i—I1—Cu1—N3ii107.49 (14)Cu1—N1—C1—C2167.1 (3)
Cu1i—I1—Cu1—I1i0.0N1—C1—C2—N20.6 (6)
N3ii—Cu1—N1—C3−78.1 (5)C3—N2—C2—C1−1.0 (6)
I1—Cu1—N1—C3155.6 (4)C6—C5—C4—C8−3.0 (7)
I1i—Cu1—N1—C348.1 (4)C6—C5—C4—C3177.8 (5)
N3ii—Cu1—N1—C1117.9 (4)N1—C3—C4—C839.7 (7)
I1—Cu1—N1—C1−8.4 (4)N2—C3—C4—C8−138.2 (5)
I1i—Cu1—N1—C1−115.9 (4)N1—C3—C4—C5−141.1 (5)
C4—C5—C6—C71.7 (8)N2—C3—C4—C541.0 (7)
C5—C6—C7—N30.9 (8)C5—C4—C8—N31.9 (7)
C1—N1—C3—N2−0.6 (5)C3—C4—C8—N3−178.9 (4)
Cu1—N1—C3—N2−166.8 (3)C4—C8—N3—C70.6 (7)
C1—N1—C3—C4−178.7 (5)C4—C8—N3—Cu1ii−177.5 (4)
Cu1—N1—C3—C415.0 (7)C6—C7—N3—C8−2.1 (7)
C2—N2—C3—N11.0 (6)C6—C7—N3—Cu1ii176.0 (4)
C2—N2—C3—C4179.2 (5)
D—H···AD—HH···AD···AD—H···A
N2—H2···I1iii0.862.833.588 (5)148.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯I1i0.862.833.588 (5)148

Symmetry code: (i) .

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