Literature DB >> 22058854

Bis{4-bromo-2-[(2-hy-droxy-eth-yl)imino-meth-yl]phenolato}nickel(II) monohydrate.

Chen-Yi Wang, Jing-Fen Li, Ping Wang, Cai-Jun Yuan.   

Abstract

The title mononuclear nickel complex, [Ni(C(9)H(9)BrNO(2))(2)]·H(2)O, was obtained by the reaction of 5-bromo-salicyl-aldehyde, 2-amino-ethanol and nickel nitrate in methanol. The Ni(II) atom is six-coordinated by two phenolate O, two imine N and two hy-droxy O atoms from two crystallographically different Schiff base ligands, forming an octa-hedral geometry. In the crystal, mol-ecules are linked by inter-molecular O-H⋯O and O-H⋯Br hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2011        PMID: 22058854      PMCID: PMC3200792          DOI: 10.1107/S1600536811031771

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For urease inhibitors, see: Wang (2009 ▶); Wang & Ye (2011 ▶). For related nickel(II) complexes, see: Arıcı et al. (2005 ▶); Liu et al. (2006 ▶); Li & Wang (2007 ▶); Ali et al. (2006 ▶).

Experimental

Crystal data

[Ni(C9H9BrNO2)2]·H2O M = 562.89 Orthorhombic, a = 9.835 (3) Å b = 12.851 (2) Å c = 16.226 (3) Å V = 2050.8 (8) Å3 Z = 4 Mo Kα radiation μ = 4.87 mm−1 T = 298 K 0.21 × 0.20 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.428, T max = 0.442 13318 measured reflections 4474 independent reflections 2310 reflections with I > 2σ(I) R int = 0.099

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.128 S = 1.02 4474 reflections 259 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.60 e Å−3 Δρmin = −0.95 e Å−3 Absolute structure: Flack (1983 ▶), 1930 Friedel pairs Flack parameter: 0.013 (19) Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811031771/ci5196sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811031771/ci5196Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C9H9BrNO2)2]·H2OF(000) = 1120
Mr = 562.89Dx = 1.823 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 2063 reflections
a = 9.835 (3) Åθ = 2.5–25.3°
b = 12.851 (2) ŵ = 4.87 mm1
c = 16.226 (3) ÅT = 298 K
V = 2050.8 (8) Å3BlocK, green
Z = 40.21 × 0.20 × 0.20 mm
Bruker SMART CCD area-detector diffractometer4474 independent reflections
Radiation source: fine-focus sealed tube2310 reflections with I > 2σ(I)
graphiteRint = 0.099
ω scansθmax = 27.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.428, Tmax = 0.442k = −16→16
13318 measured reflectionsl = −20→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.128w = 1/[σ2(Fo2) + (0.0374P)2 + 1.9512P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max = 0.001
4474 reflectionsΔρmax = 0.60 e Å3
259 parametersΔρmin = −0.95 e Å3
3 restraintsAbsolute structure: Flack (1983), 1930 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.013 (19)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br11.08191 (9)−0.02277 (7)0.25079 (7)0.0550 (3)
Br20.5363 (2)0.81053 (8)0.47258 (10)0.1150 (7)
Ni10.45998 (10)0.24321 (8)0.40117 (7)0.0323 (3)
O10.6019 (5)0.2555 (4)0.3127 (4)0.0425 (15)
O20.3198 (5)0.2157 (4)0.4990 (3)0.0364 (16)
H2A0.22800.23290.49890.044*
O30.5614 (6)0.3443 (4)0.4733 (4)0.0366 (15)
O40.3367 (6)0.1508 (4)0.3188 (4)0.0451 (17)
H4A0.31310.08120.32510.054*
O50.5810 (10)0.4431 (5)0.2144 (5)0.074 (2)
N10.5494 (7)0.1225 (5)0.4536 (4)0.0307 (17)
N20.3496 (7)0.3550 (5)0.3502 (5)0.0371 (19)
C10.7389 (8)0.1086 (6)0.3572 (5)0.029 (2)
C20.7047 (8)0.1925 (6)0.3039 (5)0.032 (2)
C30.7945 (8)0.2085 (6)0.2369 (6)0.040 (2)
H30.77720.26400.20160.048*
C40.9041 (9)0.1480 (7)0.2209 (6)0.042 (2)
H40.95820.16170.17520.051*
C50.9358 (9)0.0658 (7)0.2726 (6)0.042 (2)
C60.8539 (8)0.0483 (6)0.3384 (6)0.038 (2)
H60.8751−0.00700.37320.046*
C70.6629 (8)0.0814 (6)0.4292 (5)0.028 (2)
H70.69860.02860.46200.033*
C80.4827 (8)0.0827 (6)0.5276 (5)0.040 (2)
H8A0.55070.06200.56760.047*
H8B0.42870.02200.51380.047*
C90.3914 (9)0.1664 (7)0.5646 (6)0.045 (3)
H9A0.32760.13530.60300.054*
H9B0.44580.21710.59410.054*
C100.4558 (9)0.5003 (6)0.4176 (5)0.041 (2)
C110.5478 (8)0.4458 (6)0.4704 (5)0.033 (2)
C120.6275 (8)0.5055 (6)0.5233 (6)0.045 (2)
H120.68450.47140.56020.055*
C130.6258 (10)0.6126 (7)0.5234 (6)0.051 (3)
H130.68190.65020.55860.061*
C140.5408 (13)0.6614 (7)0.4712 (7)0.060 (3)
C150.4569 (12)0.6097 (7)0.4200 (7)0.062 (3)
H150.39870.64690.38570.075*
C160.3650 (8)0.4525 (6)0.3608 (6)0.041 (2)
H160.31210.49640.32850.049*
C170.2488 (9)0.3159 (7)0.2904 (6)0.051 (3)
H17A0.23400.36750.24770.061*
H17B0.16280.30330.31800.061*
C180.2992 (9)0.2178 (6)0.2530 (7)0.051 (3)
H18A0.22860.18580.21980.062*
H18B0.37710.23160.21800.062*
H5A0.584 (12)0.395 (5)0.178 (4)0.080*
H5B0.605 (11)0.415 (6)0.260 (3)0.080*
U11U22U33U12U13U23
Br10.0343 (4)0.0641 (6)0.0666 (7)0.0118 (5)0.0052 (6)−0.0190 (6)
Br20.2030 (18)0.0286 (5)0.1133 (12)0.0049 (9)−0.0640 (13)−0.0095 (7)
Ni10.0245 (5)0.0278 (5)0.0446 (7)0.0024 (5)0.0003 (5)0.0031 (5)
O10.032 (3)0.036 (3)0.059 (4)0.013 (3)0.003 (3)0.011 (3)
O20.026 (3)0.038 (4)0.045 (4)0.015 (3)−0.003 (3)0.004 (3)
O30.030 (4)0.032 (3)0.048 (4)0.001 (3)−0.006 (3)0.009 (3)
O40.051 (4)0.035 (3)0.050 (5)−0.003 (3)−0.012 (4)0.001 (3)
O50.076 (5)0.062 (4)0.083 (6)−0.010 (5)0.002 (5)0.017 (4)
N10.031 (4)0.025 (3)0.036 (5)−0.005 (3)0.008 (4)0.000 (3)
N20.027 (4)0.034 (4)0.050 (5)−0.005 (3)−0.002 (4)−0.005 (4)
C10.026 (5)0.031 (5)0.029 (6)0.008 (4)0.001 (4)−0.012 (4)
C20.030 (5)0.024 (4)0.041 (6)0.000 (4)−0.006 (5)−0.002 (4)
C30.043 (5)0.034 (5)0.044 (7)−0.002 (4)0.000 (5)0.004 (5)
C40.029 (5)0.060 (6)0.037 (6)−0.011 (5)0.013 (4)−0.006 (5)
C50.034 (5)0.045 (5)0.046 (7)−0.007 (4)0.001 (5)−0.022 (5)
C60.027 (5)0.033 (5)0.055 (7)0.006 (4)0.007 (5)−0.012 (5)
C70.026 (5)0.019 (4)0.038 (6)0.007 (3)−0.005 (4)−0.006 (4)
C80.036 (5)0.043 (5)0.039 (6)0.001 (4)0.002 (5)0.012 (5)
C90.031 (5)0.058 (6)0.045 (7)0.013 (4)0.007 (5)−0.008 (5)
C100.043 (5)0.034 (4)0.048 (6)0.004 (4)−0.008 (5)0.000 (4)
C110.027 (5)0.035 (5)0.036 (6)−0.001 (4)−0.008 (5)0.001 (4)
C120.046 (6)0.038 (5)0.052 (7)0.007 (4)−0.009 (5)−0.001 (5)
C130.057 (7)0.037 (5)0.059 (8)−0.001 (5)−0.009 (6)−0.016 (5)
C140.080 (8)0.031 (5)0.067 (8)−0.001 (6)−0.008 (8)0.001 (5)
C150.077 (7)0.037 (5)0.073 (8)0.013 (6)−0.018 (7)−0.004 (5)
C160.036 (5)0.029 (5)0.057 (7)0.004 (4)−0.018 (5)0.002 (5)
C170.040 (6)0.040 (5)0.072 (8)0.012 (5)−0.008 (5)0.011 (5)
C180.048 (5)0.053 (6)0.053 (7)−0.002 (4)−0.020 (6)0.000 (6)
Ni1—N11.976 (7)C4—C51.385 (12)
Ni1—N21.981 (7)C4—H40.93
Ni1—O12.008 (6)C5—C61.356 (11)
Ni1—O32.014 (6)C6—H60.93
Ni1—O22.132 (5)C7—H70.93
Ni1—O42.160 (6)C8—C91.523 (11)
Br1—C51.867 (9)C8—H8A0.97
Br2—C141.917 (8)C8—H8B0.97
O1—C21.303 (9)C9—H9A0.97
O2—C91.424 (10)C9—H9B0.97
O2—H2A0.9298C10—C151.407 (12)
O3—C111.312 (8)C10—C161.423 (11)
O4—C181.420 (10)C10—C111.430 (11)
O4—H4A0.9298C11—C121.392 (11)
O5—H5A0.853 (10)C12—C131.377 (11)
O5—H5B0.854 (10)C12—H120.93
N1—C71.297 (10)C13—C141.346 (13)
N1—C81.461 (10)C13—H130.93
N2—C161.274 (10)C14—C151.346 (14)
N2—C171.476 (11)C15—H150.93
C1—C61.405 (10)C16—H160.93
C1—C21.422 (11)C17—C181.485 (12)
C1—C71.431 (11)C17—H17A0.97
C2—C31.416 (12)C17—H17B0.97
C3—C41.354 (11)C18—H18A0.97
C3—H30.93C18—H18B0.97
N1—Ni1—N2173.1 (3)N1—C7—C1126.8 (8)
N1—Ni1—O193.4 (2)N1—C7—H7116.6
N2—Ni1—O191.5 (3)C1—C7—H7116.6
N1—Ni1—O392.1 (2)N1—C8—C9110.0 (7)
N2—Ni1—O392.6 (2)N1—C8—H8A109.7
O1—Ni1—O391.2 (2)C9—C8—H8A109.7
N1—Ni1—O280.6 (2)N1—C8—H8B109.7
N2—Ni1—O294.4 (3)C9—C8—H8B109.7
O1—Ni1—O2174.0 (2)H8A—C8—H8B108.2
O3—Ni1—O289.7 (2)O2—C9—C8108.1 (7)
N1—Ni1—O494.8 (2)O2—C9—H9A110.1
N2—Ni1—O480.4 (3)C8—C9—H9A110.1
O1—Ni1—O489.5 (2)O2—C9—H9B110.1
O3—Ni1—O4173.0 (2)C8—C9—H9B110.1
O2—Ni1—O490.4 (2)H9A—C9—H9B108.4
C2—O1—Ni1124.7 (5)C15—C10—C16117.0 (8)
C9—O2—Ni1108.1 (5)C15—C10—C11117.9 (8)
C9—O2—H2A126.0C16—C10—C11125.0 (7)
Ni1—O2—H2A125.9O3—C11—C12117.9 (7)
C11—O3—Ni1124.8 (5)O3—C11—C10125.0 (7)
C18—O4—Ni1106.1 (5)C12—C11—C10117.1 (7)
C18—O4—H4A126.9C13—C12—C11123.0 (8)
Ni1—O4—H4A126.9C13—C12—H12118.5
H5A—O5—H5B106 (3)C11—C12—H12118.5
C7—N1—C8119.7 (7)C14—C13—C12118.2 (9)
C7—N1—Ni1124.9 (6)C14—C13—H13120.9
C8—N1—Ni1115.4 (5)C12—C13—H13120.9
C16—N2—C17120.2 (8)C13—C14—C15122.6 (9)
C16—N2—Ni1126.3 (6)C13—C14—Br2118.3 (8)
C17—N2—Ni1113.3 (5)C15—C14—Br2119.1 (8)
C6—C1—C2118.5 (8)C14—C15—C10121.0 (9)
C6—C1—C7117.5 (8)C14—C15—H15119.5
C2—C1—C7123.9 (7)C10—C15—H15119.5
O1—C2—C3118.5 (7)N2—C16—C10125.9 (8)
O1—C2—C1126.0 (8)N2—C16—H16117.0
C3—C2—C1115.4 (7)C10—C16—H16117.0
C4—C3—C2124.0 (8)N2—C17—C18109.5 (7)
C4—C3—H3118.0N2—C17—H17A109.8
C2—C3—H3118.0C18—C17—H17A109.8
C3—C4—C5120.1 (9)N2—C17—H17B109.8
C3—C4—H4119.9C18—C17—H17B109.8
C5—C4—H4119.9H17A—C17—H17B108.2
C6—C5—C4118.0 (8)O4—C18—C17107.1 (8)
C6—C5—Br1120.3 (7)O4—C18—H18A110.3
C4—C5—Br1121.6 (7)C17—C18—H18A110.3
C5—C6—C1123.8 (9)O4—C18—H18B110.3
C5—C6—H6118.1C17—C18—H18B110.3
C1—C6—H6118.1H18A—C18—H18B108.6
D—H···AD—HH···AD···AD—H···A
O5—H5B···O10.85 (1)2.22 (7)2.898 (8)136 (8)
O5—H5A···Br2i0.85 (1)2.92 (5)3.666 (9)146 (8)
O4—H4A···Br1ii0.932.903.532 (6)126
O4—H4A···O5i0.932.162.841 (9)130
O2—H2A···O3iii0.931.972.694 (7)133
Table 1

Selected bond lengths (Å)

Ni1—N11.976 (7)
Ni1—N21.981 (7)
Ni1—O12.008 (6)
Ni1—O32.014 (6)
Ni1—O22.132 (5)
Ni1—O42.160 (6)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5B⋯O10.85 (1)2.22 (7)2.898 (8)136 (8)
O5—H5A⋯Br2i0.85 (1)2.92 (5)3.666 (9)146 (8)
O4—H4A⋯Br1ii0.932.903.532 (6)126
O4—H4A⋯O5i0.932.162.841 (9)130
O2—H2A⋯O3iii0.931.972.694 (7)133

Symmetry codes: (i) ; (ii) ; (iii) .

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