Literature DB >> 22058834

catena-Poly[[bis-(N,N-dimethyl-formamide-κO)zinc]-μ(2)-oxalato-κO,O:O,O].

Ju Eun Lee1, Hong-In Lee.   

Abstract

In the crystal structure of the title compound, [Zn(C(2)O(4))(C(3)H(7)NO)(2)](n), the Zn(II) ion is situated on a twofold rotation axis and has a distorted octa-hedral coordination geometry defined by the O atoms of two dimethyl-formamide mol-ecules and four O atoms of two bidentate oxalate ligands. The oxalate anion is located on an inversion centre and bridges two metal ions, resulting in a polymeric structure with infinite zigzag chains extending parallel to [010].

Entities:  

Year:  2011        PMID: 22058834      PMCID: PMC3200650          DOI: 10.1107/S1600536811030479

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Yao et al. (2007 ▶); van Albada et al. (2004 ▶); Ghosh et al. (2004 ▶); Evans & Lin (2001 ▶). For a general review on compounds with metal-organic framework structures, see: Czaja et al. (2009 ▶). For the synthesis of the ligand, see: Yoneda et al. (1978 ▶).

Experimental

Crystal data

[Zn(C2O4)(C3H7NO)2] M = 299.58 Orthorhombic, a = 7.795 (1) Å b = 9.809 (1) Å c = 15.421 (1) Å V = 1179.1 (2) Å3 Z = 4 Synchrotron radiation λ = 0.90000 Å μ = 2.10 mm−1 T = 298 K 0.14 × 0.10 × 0.09 mm

Data collection

ADSC Quantum210 diffractometer Absorption correction: multi-scan (HKL-2000 SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.757, T max = 0.833 839 measured reflections 839 independent reflections 778 reflections with I > 2σ(I) θmax = 30.4°

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.169 S = 1.09 839 reflections 81 parameters H-atom parameters constrained Δρmax = 0.80 e Å−3 Δρmin = −0.82 e Å−3 Data collection: ADSC Quantum-210 ADX (Arvai & Nielsen, 1983 ▶); cell refinement: HKL-2000 (Otwinowski & Minor, 1997 ▶); data reduction: HKL-2000; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: CrystalMaker (CrystalMaker, 2007 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811030479/wm2511sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811030479/wm2511Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C2O4)(C3H7NO)2]F(000) = 616
Mr = 299.58Dx = 1.688 Mg m3
Orthorhombic, PbnaSynchrotron radiation, λ = 0.90000 Å
Hall symbol: -P 2ac 2bCell parameters from 839 reflections
a = 7.795 (1) Åθ = 5.4–30.4°
b = 9.809 (1) ŵ = 2.10 mm1
c = 15.421 (1) ÅT = 298 K
V = 1179.1 (2) Å3Block, colourless
Z = 40.14 × 0.10 × 0.09 mm
ADSC Quantum210 diffractometer839 independent reflections
Radiation source: 6BIMX-I synchroton beamlin PLS, KOREA778 reflections with I > 2σ(I)
Si111 double crystalRint = 0.000
φ scansθmax = 30.4°, θmin = 5.4°
Absorption correction: multi-scan (HKL-2000SCALEPACK; Otwinowski & Minor, 1997)h = 0→8
Tmin = 0.757, Tmax = 0.833k = 0→10
839 measured reflectionsl = 0→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.058H-atom parameters constrained
wR(F2) = 0.169w = 1/[σ2(Fo2) + (0.1443P)2 + 0.1456P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max < 0.001
839 reflectionsΔρmax = 0.80 e Å3
81 parametersΔρmin = −0.82 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.034 (9)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.15869 (6)0.75000.00000.0503 (6)
O10.1498 (3)0.5678 (2)0.07184 (15)0.0600 (8)
O2−0.0220 (3)0.6367 (2)−0.07091 (14)0.0592 (8)
O30.3580 (3)0.6927 (3)−0.08757 (15)0.0599 (8)
N10.5920 (4)0.7617 (2)−0.1613 (2)0.0541 (9)
C1−0.0497 (4)0.5204 (3)−0.0417 (2)0.0498 (9)
C20.4708 (5)0.7774 (4)−0.1043 (3)0.0559 (10)
H20.46860.8590−0.07370.067*
C30.6058 (5)0.6357 (4)−0.2119 (2)0.0687 (11)
H3A0.68960.5769−0.18580.103*
H3B0.64030.6571−0.27010.103*
H3C0.49660.5905−0.21300.103*
C40.7261 (5)0.8631 (4)−0.1751 (3)0.0741 (11)
H4A0.70630.9400−0.13790.111*
H4B0.72440.8924−0.23450.111*
H4C0.83580.8237−0.16200.111*
U11U22U33U12U13U23
Zn10.0436 (8)0.0500 (8)0.0573 (8)0.0000.0000.00088 (15)
O10.0572 (14)0.0566 (14)0.0661 (16)−0.0077 (9)−0.0120 (9)0.0045 (10)
O20.0611 (15)0.0539 (14)0.0626 (15)−0.0058 (9)−0.0082 (9)0.0082 (9)
O30.0538 (16)0.0587 (17)0.0672 (16)−0.0041 (10)0.0109 (9)−0.0060 (12)
N10.0432 (19)0.0546 (18)0.065 (2)0.0040 (10)0.0055 (18)0.0000 (10)
C10.0438 (14)0.0507 (17)0.055 (2)0.0013 (12)0.0012 (15)0.0008 (13)
C20.051 (2)0.0531 (17)0.063 (2)0.0038 (16)−0.0031 (17)−0.0021 (16)
C30.060 (2)0.074 (2)0.072 (2)0.0038 (16)0.0104 (18)−0.0101 (17)
C40.057 (2)0.065 (2)0.101 (3)−0.0029 (15)0.014 (2)0.0077 (18)
Zn1—O22.101 (2)N1—C31.466 (4)
Zn1—O2i2.101 (2)C1—O1ii1.254 (4)
Zn1—O12.104 (2)C1—C1ii1.554 (6)
Zn1—O1i2.104 (2)C2—H20.9300
Zn1—O3i2.134 (2)C3—H3A0.9600
Zn1—O32.134 (2)C3—H3B0.9600
O1—C1ii1.254 (4)C3—H3C0.9600
O2—C11.246 (3)C4—H4A0.9600
O3—C21.237 (5)C4—H4B0.9600
N1—C21.299 (5)C4—H4C0.9600
N1—C41.458 (5)
O2—Zn1—O2i95.82 (14)C4—N1—C3116.4 (3)
O2—Zn1—O178.62 (8)O2—C1—O1ii127.3 (3)
O2i—Zn1—O198.81 (9)O2—C1—C1ii116.7 (3)
O2—Zn1—O1i98.81 (9)O1ii—C1—C1ii116.1 (3)
O2i—Zn1—O1i78.62 (8)O3—C2—N1125.3 (4)
O1—Zn1—O1i176.23 (11)O3—C2—H2117.3
O2—Zn1—O3i163.08 (9)N1—C2—H2117.3
O2i—Zn1—O3i91.12 (9)N1—C3—H3A109.5
O1—Zn1—O3i85.09 (9)N1—C3—H3B109.5
O1i—Zn1—O3i97.67 (9)H3A—C3—H3B109.5
O2—Zn1—O391.12 (9)N1—C3—H3C109.5
O2i—Zn1—O3163.08 (9)H3A—C3—H3C109.5
O1—Zn1—O397.67 (9)H3B—C3—H3C109.5
O1i—Zn1—O385.09 (9)N1—C4—H4A109.5
O3i—Zn1—O386.53 (13)N1—C4—H4B109.5
C1ii—O1—Zn1114.3 (2)H4A—C4—H4B109.5
C1—O2—Zn1114.36 (19)N1—C4—H4C109.5
C2—O3—Zn1118.2 (2)H4A—C4—H4C109.5
C2—N1—C4122.6 (3)H4B—C4—H4C109.5
C2—N1—C3120.9 (3)
O2—Zn1—O1—C1ii0.7 (2)O2i—Zn1—O3—C229.7 (5)
O2i—Zn1—O1—C1ii94.9 (2)O1—Zn1—O3—C2−137.2 (3)
O3i—Zn1—O1—C1ii−174.7 (2)O1i—Zn1—O3—C245.3 (3)
O3—Zn1—O1—C1ii−88.9 (2)O3i—Zn1—O3—C2−52.7 (2)
O2i—Zn1—O2—C1−98.8 (2)Zn1—O2—C1—O1ii−179.4 (3)
O1—Zn1—O2—C1−0.9 (2)Zn1—O2—C1—C1ii0.9 (4)
O1i—Zn1—O2—C1−178.1 (2)Zn1—O3—C2—N1−174.2 (3)
O3i—Zn1—O2—C115.0 (4)C4—N1—C2—O3−177.0 (4)
O3—Zn1—O2—C196.7 (2)C3—N1—C2—O3−0.6 (6)
O2—Zn1—O3—C2144.1 (3)
Table 1

Selected bond lengths (Å)

Zn1—O22.101 (2)
Zn1—O12.104 (2)
Zn1—O32.134 (2)
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