| Literature DB >> 22058810 |
Yan-Bing Shen1, Min Wang, Qi-Kun Liang, Jian-Mei Luo.
Abstract
The title compound, C(19)H(26)O(4), was biotransformed from androstenedione. In the crystal, inter-molecular O-H⋯O hydrogen bonds link molecules into a corrugated sheet, which lies parallel to the ab plane. Ring A has a slightly distorted half-chair conformation, rings B and C adopt chair conformations, while the cyclo-pentane ring D adopts a 14α-envelope conformation.Entities:
Year: 2011 PMID: 22058810 PMCID: PMC3201477 DOI: 10.1107/S1600536811038608
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H26O4 | |
| Mo | |
| Orthorhombic, | Cell parameters from 6101 reflections |
| θ = 2.0–28.0° | |
| µ = 0.09 mm−1 | |
| Prism, colourless | |
| 0.22 × 0.18 × 0.12 mm | |
| Rigaku Saturn 724CCD diffractometer | 2275 independent reflections |
| Radiation source: rotating anode | 2050 reflections with |
| multilayer | |
| Detector resolution: 14.22 pixels mm-1 | θmax = 27.9°, θmin = 2.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 17662 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2275 reflections | (Δ/σ)max < 0.001 |
| 218 parameters | Δρmax = 0.16 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Experimental. Rigaku |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.31267 (17) | 0.53408 (9) | 0.26929 (8) | 0.0327 (3) | |
| O2 | 0.51158 (16) | 0.08691 (11) | 0.09715 (8) | 0.0284 (3) | |
| H2 | 0.563 (3) | 0.0711 (19) | 0.1363 (15) | 0.056 (8)* | |
| O3 | −0.27423 (18) | 0.05176 (12) | −0.03028 (8) | 0.0328 (3) | |
| H3 | −0.357 (4) | 0.064 (2) | 0.0029 (16) | 0.071 (9)* | |
| O4 | 0.16087 (19) | −0.21111 (10) | −0.06034 (7) | 0.0349 (4) | |
| C1 | 0.4080 (2) | 0.26310 (14) | 0.19535 (12) | 0.0286 (4) | |
| H1A | 0.4888 | 0.2042 | 0.2087 | 0.034* | |
| H1B | 0.4428 | 0.2935 | 0.1445 | 0.034* | |
| C2 | 0.4205 (2) | 0.35273 (15) | 0.25684 (12) | 0.0309 (4) | |
| H2A | 0.4037 | 0.3203 | 0.3089 | 0.037* | |
| H2B | 0.5357 | 0.3850 | 0.2553 | 0.037* | |
| C3 | 0.2921 (2) | 0.44021 (14) | 0.24442 (10) | 0.0238 (4) | |
| C4 | 0.1357 (2) | 0.40863 (14) | 0.20623 (10) | 0.0232 (4) | |
| H4 | 0.0535 | 0.4636 | 0.1964 | 0.028* | |
| C5 | 0.1002 (2) | 0.30692 (13) | 0.18408 (10) | 0.0214 (4) | |
| C6 | −0.0777 (2) | 0.28022 (15) | 0.15829 (11) | 0.0299 (4) | |
| H6A | −0.1398 | 0.3489 | 0.1482 | 0.036* | |
| H6B | −0.1371 | 0.2415 | 0.2008 | 0.036* | |
| C7 | −0.0825 (2) | 0.21006 (14) | 0.08549 (11) | 0.0267 (4) | |
| H7A | −0.0385 | 0.2522 | 0.0408 | 0.032* | |
| H7B | −0.2012 | 0.1890 | 0.0740 | 0.032* | |
| C8 | 0.0253 (2) | 0.10785 (13) | 0.09697 (10) | 0.0202 (4) | |
| H8 | −0.0158 | 0.0696 | 0.1447 | 0.024* | |
| C9 | 0.2132 (2) | 0.14340 (14) | 0.11087 (9) | 0.0185 (3) | |
| H9 | 0.2434 | 0.1930 | 0.0669 | 0.022* | |
| C10 | 0.2289 (2) | 0.21395 (13) | 0.18739 (10) | 0.0205 (4) | |
| C11 | 0.3406 (2) | 0.04730 (14) | 0.10728 (10) | 0.0213 (4) | |
| H11 | 0.3346 | 0.0064 | 0.1575 | 0.026* | |
| C12 | 0.3116 (2) | −0.03257 (14) | 0.04087 (10) | 0.0236 (4) | |
| H12A | 0.3401 | 0.0030 | −0.0091 | 0.028* | |
| H12B | 0.3875 | −0.0963 | 0.0474 | 0.028* | |
| C13 | 0.1278 (2) | −0.07058 (13) | 0.03913 (9) | 0.0212 (4) | |
| C14 | 0.0122 (2) | 0.02890 (13) | 0.02873 (9) | 0.0216 (4) | |
| H14 | 0.0545 | 0.0688 | −0.0181 | 0.026* | |
| C15 | −0.1598 (2) | −0.02117 (14) | 0.00633 (10) | 0.0257 (4) | |
| H15 | −0.2147 | −0.0537 | 0.0533 | 0.031* | |
| C16 | −0.1069 (3) | −0.11229 (16) | −0.05010 (11) | 0.0328 (5) | |
| H16A | −0.1820 | −0.1765 | −0.0440 | 0.039* | |
| H16B | −0.1139 | −0.0866 | −0.1045 | 0.039* | |
| C17 | 0.0746 (2) | −0.14129 (15) | −0.02929 (10) | 0.0262 (4) | |
| C18 | 0.0840 (2) | −0.13973 (14) | 0.11174 (9) | 0.0256 (4) | |
| H18A | −0.0316 | −0.1685 | 0.1067 | 0.038* | |
| H18B | 0.0913 | −0.0940 | 0.1583 | 0.038* | |
| H18C | 0.1645 | −0.2003 | 0.1161 | 0.038* | |
| C19 | 0.1869 (3) | 0.14572 (15) | 0.26033 (10) | 0.0325 (5) | |
| H19A | 0.2029 | 0.1905 | 0.3069 | 0.049* | |
| H19B | 0.2625 | 0.0824 | 0.2627 | 0.049* | |
| H19C | 0.0686 | 0.1210 | 0.2577 | 0.049* |
| O1 | 0.0360 (8) | 0.0215 (6) | 0.0407 (8) | −0.0023 (6) | −0.0052 (6) | −0.0074 (6) |
| O2 | 0.0162 (6) | 0.0369 (7) | 0.0322 (7) | 0.0014 (6) | −0.0021 (6) | −0.0035 (6) |
| O3 | 0.0253 (7) | 0.0453 (8) | 0.0277 (7) | 0.0002 (7) | −0.0082 (6) | 0.0004 (6) |
| O4 | 0.0415 (9) | 0.0337 (7) | 0.0296 (7) | −0.0005 (7) | 0.0077 (6) | −0.0113 (6) |
| C1 | 0.0193 (9) | 0.0242 (10) | 0.0422 (11) | 0.0024 (8) | −0.0062 (8) | −0.0097 (8) |
| C2 | 0.0246 (9) | 0.0266 (9) | 0.0414 (11) | −0.0001 (8) | −0.0094 (9) | −0.0079 (9) |
| C3 | 0.0274 (9) | 0.0224 (8) | 0.0217 (8) | −0.0033 (8) | 0.0029 (7) | −0.0018 (7) |
| C4 | 0.0235 (9) | 0.0214 (9) | 0.0246 (8) | 0.0046 (7) | 0.0005 (7) | −0.0006 (7) |
| C5 | 0.0210 (9) | 0.0227 (9) | 0.0206 (8) | −0.0002 (7) | 0.0018 (7) | −0.0007 (7) |
| C6 | 0.0181 (9) | 0.0265 (9) | 0.0452 (11) | 0.0025 (8) | −0.0018 (8) | −0.0105 (9) |
| C7 | 0.0187 (9) | 0.0256 (9) | 0.0357 (10) | 0.0004 (8) | −0.0058 (8) | −0.0030 (8) |
| C8 | 0.0158 (8) | 0.0217 (8) | 0.0233 (8) | −0.0014 (7) | −0.0008 (7) | −0.0004 (7) |
| C9 | 0.0162 (8) | 0.0193 (8) | 0.0201 (8) | 0.0001 (7) | −0.0008 (6) | 0.0020 (7) |
| C10 | 0.0206 (9) | 0.0189 (8) | 0.0221 (8) | −0.0005 (7) | −0.0024 (7) | −0.0004 (7) |
| C11 | 0.0169 (8) | 0.0233 (8) | 0.0238 (8) | 0.0007 (7) | −0.0006 (7) | 0.0007 (7) |
| C12 | 0.0219 (9) | 0.0248 (9) | 0.0243 (8) | 0.0023 (8) | 0.0022 (7) | −0.0041 (7) |
| C13 | 0.0233 (9) | 0.0219 (9) | 0.0186 (8) | −0.0019 (7) | 0.0027 (7) | −0.0048 (7) |
| C14 | 0.0184 (8) | 0.0253 (9) | 0.0212 (8) | −0.0024 (7) | 0.0005 (7) | 0.0001 (7) |
| C15 | 0.0223 (9) | 0.0315 (10) | 0.0234 (9) | −0.0038 (8) | −0.0026 (7) | −0.0024 (8) |
| C16 | 0.0302 (10) | 0.0405 (11) | 0.0275 (9) | −0.0075 (9) | 0.0003 (8) | −0.0099 (9) |
| C17 | 0.0311 (10) | 0.0269 (9) | 0.0206 (8) | −0.0068 (9) | 0.0063 (8) | −0.0026 (8) |
| C18 | 0.0323 (10) | 0.0219 (8) | 0.0225 (8) | 0.0027 (8) | 0.0041 (8) | −0.0014 (7) |
| C19 | 0.0553 (13) | 0.0225 (8) | 0.0197 (8) | −0.0005 (10) | −0.0029 (9) | −0.0007 (8) |
| O1—C3 | 1.240 (2) | C8—H8 | 1.0000 |
| O2—C11 | 1.442 (2) | C9—C11 | 1.549 (2) |
| O2—H2 | 0.81 (3) | C9—C10 | 1.581 (2) |
| O3—C15 | 1.417 (2) | C9—H9 | 1.0000 |
| O3—H3 | 0.88 (3) | C10—C19 | 1.545 (2) |
| O4—C17 | 1.217 (2) | C11—C12 | 1.523 (2) |
| C1—C2 | 1.530 (2) | C11—H11 | 1.0000 |
| C1—C10 | 1.539 (2) | C12—C13 | 1.521 (2) |
| C1—H1A | 0.9900 | C12—H12A | 0.9900 |
| C1—H1B | 0.9900 | C12—H12B | 0.9900 |
| C2—C3 | 1.490 (2) | C13—C17 | 1.521 (2) |
| C2—H2A | 0.9900 | C13—C14 | 1.533 (2) |
| C2—H2B | 0.9900 | C13—C18 | 1.549 (2) |
| C3—C4 | 1.449 (2) | C14—C15 | 1.536 (2) |
| C4—C5 | 1.335 (2) | C14—H14 | 1.0000 |
| C4—H4 | 0.9500 | C15—C16 | 1.539 (2) |
| C5—C6 | 1.505 (2) | C15—H15 | 1.0000 |
| C5—C10 | 1.527 (2) | C16—C17 | 1.515 (3) |
| C6—C7 | 1.521 (2) | C16—H16A | 0.9900 |
| C6—H6A | 0.9900 | C16—H16B | 0.9900 |
| C6—H6B | 0.9900 | C18—H18A | 0.9800 |
| C7—C8 | 1.527 (2) | C18—H18B | 0.9800 |
| C7—H7A | 0.9900 | C18—H18C | 0.9800 |
| C7—H7B | 0.9900 | C19—H19A | 0.9800 |
| C8—C14 | 1.526 (2) | C19—H19B | 0.9800 |
| C8—C9 | 1.561 (2) | C19—H19C | 0.9800 |
| C11—O2—H2 | 106.5 (18) | C19—C10—C9 | 111.30 (12) |
| C15—O3—H3 | 107.0 (18) | O2—C11—C12 | 105.43 (13) |
| C2—C1—C10 | 113.73 (15) | O2—C11—C9 | 110.63 (13) |
| C2—C1—H1A | 108.8 | C12—C11—C9 | 115.02 (13) |
| C10—C1—H1A | 108.8 | O2—C11—H11 | 108.5 |
| C2—C1—H1B | 108.8 | C12—C11—H11 | 108.5 |
| C10—C1—H1B | 108.8 | C9—C11—H11 | 108.5 |
| H1A—C1—H1B | 107.7 | C13—C12—C11 | 110.77 (14) |
| C3—C2—C1 | 112.03 (15) | C13—C12—H12A | 109.5 |
| C3—C2—H2A | 109.2 | C11—C12—H12A | 109.5 |
| C1—C2—H2A | 109.2 | C13—C12—H12B | 109.5 |
| C3—C2—H2B | 109.2 | C11—C12—H12B | 109.5 |
| C1—C2—H2B | 109.2 | H12A—C12—H12B | 108.1 |
| H2A—C2—H2B | 107.9 | C12—C13—C17 | 116.88 (14) |
| O1—C3—C4 | 121.08 (17) | C12—C13—C14 | 108.82 (13) |
| O1—C3—C2 | 122.11 (16) | C17—C13—C14 | 101.58 (13) |
| C4—C3—C2 | 116.67 (14) | C12—C13—C18 | 111.33 (15) |
| C5—C4—C3 | 123.90 (17) | C17—C13—C18 | 104.51 (13) |
| C5—C4—H4 | 118.0 | C14—C13—C18 | 113.48 (14) |
| C3—C4—H4 | 118.0 | C8—C14—C13 | 112.07 (13) |
| C4—C5—C6 | 118.85 (16) | C8—C14—C15 | 120.43 (14) |
| C4—C5—C10 | 123.31 (16) | C13—C14—C15 | 103.52 (13) |
| C6—C5—C10 | 117.76 (14) | C8—C14—H14 | 106.7 |
| C5—C6—C7 | 112.89 (15) | C13—C14—H14 | 106.7 |
| C5—C6—H6A | 109.0 | C15—C14—H14 | 106.7 |
| C7—C6—H6A | 109.0 | O3—C15—C14 | 114.78 (14) |
| C5—C6—H6B | 109.0 | O3—C15—C16 | 110.50 (15) |
| C7—C6—H6B | 109.0 | C14—C15—C16 | 102.16 (15) |
| H6A—C6—H6B | 107.8 | O3—C15—H15 | 109.7 |
| C6—C7—C8 | 110.18 (14) | C14—C15—H15 | 109.7 |
| C6—C7—H7A | 109.6 | C16—C15—H15 | 109.7 |
| C8—C7—H7A | 109.6 | C17—C16—C15 | 106.06 (15) |
| C6—C7—H7B | 109.6 | C17—C16—H16A | 110.5 |
| C8—C7—H7B | 109.6 | C15—C16—H16A | 110.5 |
| H7A—C7—H7B | 108.1 | C17—C16—H16B | 110.5 |
| C14—C8—C7 | 112.61 (13) | C15—C16—H16B | 110.5 |
| C14—C8—C9 | 111.06 (13) | H16A—C16—H16B | 108.7 |
| C7—C8—C9 | 108.46 (13) | O4—C17—C16 | 126.00 (17) |
| C14—C8—H8 | 108.2 | O4—C17—C13 | 126.01 (18) |
| C7—C8—H8 | 108.2 | C16—C17—C13 | 107.96 (15) |
| C9—C8—H8 | 108.2 | C13—C18—H18A | 109.5 |
| C11—C9—C8 | 113.24 (13) | C13—C18—H18B | 109.5 |
| C11—C9—C10 | 113.54 (12) | H18A—C18—H18B | 109.5 |
| C8—C9—C10 | 110.80 (13) | C13—C18—H18C | 109.5 |
| C11—C9—H9 | 106.2 | H18A—C18—H18C | 109.5 |
| C8—C9—H9 | 106.2 | H18B—C18—H18C | 109.5 |
| C10—C9—H9 | 106.2 | C10—C19—H19A | 109.5 |
| C5—C10—C1 | 108.55 (13) | C10—C19—H19B | 109.5 |
| C5—C10—C19 | 107.05 (14) | H19A—C19—H19B | 109.5 |
| C1—C10—C19 | 109.65 (15) | C10—C19—H19C | 109.5 |
| C5—C10—C9 | 109.03 (13) | H19A—C19—H19C | 109.5 |
| C1—C10—C9 | 111.13 (14) | H19B—C19—H19C | 109.5 |
| C10—C1—C2—C3 | −53.7 (2) | C10—C9—C11—O2 | −69.69 (17) |
| C1—C2—C3—O1 | −155.82 (17) | C8—C9—C11—C12 | 43.52 (19) |
| C1—C2—C3—C4 | 28.3 (2) | C10—C9—C11—C12 | 171.00 (14) |
| O1—C3—C4—C5 | −174.15 (17) | O2—C11—C12—C13 | −173.29 (13) |
| C2—C3—C4—C5 | 1.8 (3) | C9—C11—C12—C13 | −51.13 (19) |
| C3—C4—C5—C6 | 169.05 (16) | C11—C12—C13—C17 | 173.62 (14) |
| C3—C4—C5—C10 | −7.7 (3) | C11—C12—C13—C14 | 59.39 (18) |
| C4—C5—C6—C7 | 136.19 (17) | C11—C12—C13—C18 | −66.41 (17) |
| C10—C5—C6—C7 | −46.9 (2) | C7—C8—C14—C13 | 177.14 (14) |
| C5—C6—C7—C8 | 53.8 (2) | C9—C8—C14—C13 | 55.28 (18) |
| C6—C7—C8—C14 | 174.60 (14) | C7—C8—C14—C15 | −60.8 (2) |
| C6—C7—C8—C9 | −62.07 (19) | C9—C8—C14—C15 | 177.33 (15) |
| C14—C8—C9—C11 | −44.45 (18) | C12—C13—C14—C8 | −63.21 (17) |
| C7—C8—C9—C11 | −168.71 (14) | C17—C13—C14—C8 | 172.92 (14) |
| C14—C8—C9—C10 | −173.35 (13) | C18—C13—C14—C8 | 61.33 (18) |
| C7—C8—C9—C10 | 62.39 (17) | C12—C13—C14—C15 | 165.52 (14) |
| C4—C5—C10—C1 | −16.8 (2) | C17—C13—C14—C15 | 41.65 (16) |
| C6—C5—C10—C1 | 166.38 (16) | C18—C13—C14—C15 | −69.93 (17) |
| C4—C5—C10—C19 | 101.45 (19) | C8—C14—C15—O3 | 73.1 (2) |
| C6—C5—C10—C19 | −75.32 (18) | C13—C14—C15—O3 | −160.83 (14) |
| C4—C5—C10—C9 | −138.03 (16) | C8—C14—C15—C16 | −167.34 (15) |
| C6—C5—C10—C9 | 45.2 (2) | C13—C14—C15—C16 | −41.22 (17) |
| C2—C1—C10—C5 | 46.6 (2) | O3—C15—C16—C17 | 147.08 (15) |
| C2—C1—C10—C19 | −70.07 (19) | C14—C15—C16—C17 | 24.51 (18) |
| C2—C1—C10—C9 | 166.46 (14) | C15—C16—C17—O4 | 179.09 (17) |
| C11—C9—C10—C5 | 179.05 (13) | C15—C16—C17—C13 | 1.08 (18) |
| C8—C9—C10—C5 | −52.21 (17) | C12—C13—C17—O4 | 37.5 (2) |
| C11—C9—C10—C1 | 59.44 (18) | C14—C13—C17—O4 | 155.76 (17) |
| C8—C9—C10—C1 | −171.82 (14) | C18—C13—C17—O4 | −86.0 (2) |
| C11—C9—C10—C19 | −63.08 (18) | C12—C13—C17—C16 | −144.46 (16) |
| C8—C9—C10—C19 | 65.66 (18) | C14—C13—C17—C16 | −26.23 (17) |
| C8—C9—C11—O2 | 162.83 (13) | C18—C13—C17—C16 | 92.00 (16) |
| H··· | ||||
| O3—H3···O2i | 0.88 (3) | 1.94 (3) | 2.800 (2) | 164 (3) |
| O2—H2···O1ii | 0.81 (3) | 1.95 (3) | 2.7600 (19) | 180 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯O2i | 0.88 (3) | 1.94 (3) | 2.800 (2) | 164 (3) |
| O2—H2⋯O1ii | 0.81 (3) | 1.95 (3) | 2.7600 (19) | 180 (3) |
Symmetry codes: (i) ; (ii) .