Literature DB >> 22058810

11α,15α-Dihy-droxy-androst-4-ene-3,17-dione.

Yan-Bing Shen1, Min Wang, Qi-Kun Liang, Jian-Mei Luo.   

Abstract

The title compound, C(19)H(26)O(4), was biotransformed from androstenedione. In the crystal, inter-molecular O-H⋯O hydrogen bonds link molecules into a corrugated sheet, which lies parallel to the ab plane. Ring A has a slightly distorted half-chair conformation, rings B and C adopt chair conformations, while the cyclo-pentane ring D adopts a 14α-envelope conformation.

Entities:  

Year:  2011        PMID: 22058810      PMCID: PMC3201477          DOI: 10.1107/S1600536811038608

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Galdecki et al. (1990 ▶); Thamotharan et al. (2004 ▶); Vasuki et al. (2002 ▶). For details of biotransformation, see: Ahmad et al. (1992 ▶); Kollerov et al. (2008 ▶); Malaviya & Gomes (2008 ▶); Perez et al. (2006 ▶). For conformational analysis, see Cremer & Pople (1975 ▶).

Experimental

Crystal data

C19H26O4 M = 318.40 Orthorhombic, a = 7.8716 (8) Å b = 12.2725 (12) Å c = 17.2100 (16) Å V = 1662.6 (3) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 113 K 0.22 × 0.18 × 0.12 mm

Data collection

Rigaku Saturn 724CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.981, T max = 0.990 17662 measured reflections 2275 independent reflections 2050 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.081 S = 1.03 2275 reflections 218 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.16 e Å−3 Δρmin = −0.20 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811038608/lw2070sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811038608/lw2070Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H26O4Dx = 1.272 Mg m3
Mr = 318.40Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 6101 reflections
a = 7.8716 (8) Åθ = 2.0–28.0°
b = 12.2725 (12) ŵ = 0.09 mm1
c = 17.2100 (16) ÅT = 113 K
V = 1662.6 (3) Å3Prism, colourless
Z = 40.22 × 0.18 × 0.12 mm
F(000) = 688
Rigaku Saturn 724CCD diffractometer2275 independent reflections
Radiation source: rotating anode2050 reflections with I > 2σ(I)
multilayerRint = 0.047
Detector resolution: 14.22 pixels mm-1θmax = 27.9°, θmin = 2.0°
ω scansh = −10→10
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −14→16
Tmin = 0.981, Tmax = 0.990l = −21→22
17662 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0478P)2] where P = (Fo2 + 2Fc2)/3
2275 reflections(Δ/σ)max < 0.001
218 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.20 e Å3
Experimental. Rigaku CrystalClear-SM Expert 2.0 r2
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.31267 (17)0.53408 (9)0.26929 (8)0.0327 (3)
O20.51158 (16)0.08691 (11)0.09715 (8)0.0284 (3)
H20.563 (3)0.0711 (19)0.1363 (15)0.056 (8)*
O3−0.27423 (18)0.05176 (12)−0.03028 (8)0.0328 (3)
H3−0.357 (4)0.064 (2)0.0029 (16)0.071 (9)*
O40.16087 (19)−0.21111 (10)−0.06034 (7)0.0349 (4)
C10.4080 (2)0.26310 (14)0.19535 (12)0.0286 (4)
H1A0.48880.20420.20870.034*
H1B0.44280.29350.14450.034*
C20.4205 (2)0.35273 (15)0.25684 (12)0.0309 (4)
H2A0.40370.32030.30890.037*
H2B0.53570.38500.25530.037*
C30.2921 (2)0.44021 (14)0.24442 (10)0.0238 (4)
C40.1357 (2)0.40863 (14)0.20623 (10)0.0232 (4)
H40.05350.46360.19640.028*
C50.1002 (2)0.30692 (13)0.18408 (10)0.0214 (4)
C6−0.0777 (2)0.28022 (15)0.15829 (11)0.0299 (4)
H6A−0.13980.34890.14820.036*
H6B−0.13710.24150.20080.036*
C7−0.0825 (2)0.21006 (14)0.08549 (11)0.0267 (4)
H7A−0.03850.25220.04080.032*
H7B−0.20120.18900.07400.032*
C80.0253 (2)0.10785 (13)0.09697 (10)0.0202 (4)
H8−0.01580.06960.14470.024*
C90.2132 (2)0.14340 (14)0.11087 (9)0.0185 (3)
H90.24340.19300.06690.022*
C100.2289 (2)0.21395 (13)0.18739 (10)0.0205 (4)
C110.3406 (2)0.04730 (14)0.10728 (10)0.0213 (4)
H110.33460.00640.15750.026*
C120.3116 (2)−0.03257 (14)0.04087 (10)0.0236 (4)
H12A0.34010.0030−0.00910.028*
H12B0.3875−0.09630.04740.028*
C130.1278 (2)−0.07058 (13)0.03913 (9)0.0212 (4)
C140.0122 (2)0.02890 (13)0.02873 (9)0.0216 (4)
H140.05450.0688−0.01810.026*
C15−0.1598 (2)−0.02117 (14)0.00633 (10)0.0257 (4)
H15−0.2147−0.05370.05330.031*
C16−0.1069 (3)−0.11229 (16)−0.05010 (11)0.0328 (5)
H16A−0.1820−0.1765−0.04400.039*
H16B−0.1139−0.0866−0.10450.039*
C170.0746 (2)−0.14129 (15)−0.02929 (10)0.0262 (4)
C180.0840 (2)−0.13973 (14)0.11174 (9)0.0256 (4)
H18A−0.0316−0.16850.10670.038*
H18B0.0913−0.09400.15830.038*
H18C0.1645−0.20030.11610.038*
C190.1869 (3)0.14572 (15)0.26033 (10)0.0325 (5)
H19A0.20290.19050.30690.049*
H19B0.26250.08240.26270.049*
H19C0.06860.12100.25770.049*
U11U22U33U12U13U23
O10.0360 (8)0.0215 (6)0.0407 (8)−0.0023 (6)−0.0052 (6)−0.0074 (6)
O20.0162 (6)0.0369 (7)0.0322 (7)0.0014 (6)−0.0021 (6)−0.0035 (6)
O30.0253 (7)0.0453 (8)0.0277 (7)0.0002 (7)−0.0082 (6)0.0004 (6)
O40.0415 (9)0.0337 (7)0.0296 (7)−0.0005 (7)0.0077 (6)−0.0113 (6)
C10.0193 (9)0.0242 (10)0.0422 (11)0.0024 (8)−0.0062 (8)−0.0097 (8)
C20.0246 (9)0.0266 (9)0.0414 (11)−0.0001 (8)−0.0094 (9)−0.0079 (9)
C30.0274 (9)0.0224 (8)0.0217 (8)−0.0033 (8)0.0029 (7)−0.0018 (7)
C40.0235 (9)0.0214 (9)0.0246 (8)0.0046 (7)0.0005 (7)−0.0006 (7)
C50.0210 (9)0.0227 (9)0.0206 (8)−0.0002 (7)0.0018 (7)−0.0007 (7)
C60.0181 (9)0.0265 (9)0.0452 (11)0.0025 (8)−0.0018 (8)−0.0105 (9)
C70.0187 (9)0.0256 (9)0.0357 (10)0.0004 (8)−0.0058 (8)−0.0030 (8)
C80.0158 (8)0.0217 (8)0.0233 (8)−0.0014 (7)−0.0008 (7)−0.0004 (7)
C90.0162 (8)0.0193 (8)0.0201 (8)0.0001 (7)−0.0008 (6)0.0020 (7)
C100.0206 (9)0.0189 (8)0.0221 (8)−0.0005 (7)−0.0024 (7)−0.0004 (7)
C110.0169 (8)0.0233 (8)0.0238 (8)0.0007 (7)−0.0006 (7)0.0007 (7)
C120.0219 (9)0.0248 (9)0.0243 (8)0.0023 (8)0.0022 (7)−0.0041 (7)
C130.0233 (9)0.0219 (9)0.0186 (8)−0.0019 (7)0.0027 (7)−0.0048 (7)
C140.0184 (8)0.0253 (9)0.0212 (8)−0.0024 (7)0.0005 (7)0.0001 (7)
C150.0223 (9)0.0315 (10)0.0234 (9)−0.0038 (8)−0.0026 (7)−0.0024 (8)
C160.0302 (10)0.0405 (11)0.0275 (9)−0.0075 (9)0.0003 (8)−0.0099 (9)
C170.0311 (10)0.0269 (9)0.0206 (8)−0.0068 (9)0.0063 (8)−0.0026 (8)
C180.0323 (10)0.0219 (8)0.0225 (8)0.0027 (8)0.0041 (8)−0.0014 (7)
C190.0553 (13)0.0225 (8)0.0197 (8)−0.0005 (10)−0.0029 (9)−0.0007 (8)
O1—C31.240 (2)C8—H81.0000
O2—C111.442 (2)C9—C111.549 (2)
O2—H20.81 (3)C9—C101.581 (2)
O3—C151.417 (2)C9—H91.0000
O3—H30.88 (3)C10—C191.545 (2)
O4—C171.217 (2)C11—C121.523 (2)
C1—C21.530 (2)C11—H111.0000
C1—C101.539 (2)C12—C131.521 (2)
C1—H1A0.9900C12—H12A0.9900
C1—H1B0.9900C12—H12B0.9900
C2—C31.490 (2)C13—C171.521 (2)
C2—H2A0.9900C13—C141.533 (2)
C2—H2B0.9900C13—C181.549 (2)
C3—C41.449 (2)C14—C151.536 (2)
C4—C51.335 (2)C14—H141.0000
C4—H40.9500C15—C161.539 (2)
C5—C61.505 (2)C15—H151.0000
C5—C101.527 (2)C16—C171.515 (3)
C6—C71.521 (2)C16—H16A0.9900
C6—H6A0.9900C16—H16B0.9900
C6—H6B0.9900C18—H18A0.9800
C7—C81.527 (2)C18—H18B0.9800
C7—H7A0.9900C18—H18C0.9800
C7—H7B0.9900C19—H19A0.9800
C8—C141.526 (2)C19—H19B0.9800
C8—C91.561 (2)C19—H19C0.9800
C11—O2—H2106.5 (18)C19—C10—C9111.30 (12)
C15—O3—H3107.0 (18)O2—C11—C12105.43 (13)
C2—C1—C10113.73 (15)O2—C11—C9110.63 (13)
C2—C1—H1A108.8C12—C11—C9115.02 (13)
C10—C1—H1A108.8O2—C11—H11108.5
C2—C1—H1B108.8C12—C11—H11108.5
C10—C1—H1B108.8C9—C11—H11108.5
H1A—C1—H1B107.7C13—C12—C11110.77 (14)
C3—C2—C1112.03 (15)C13—C12—H12A109.5
C3—C2—H2A109.2C11—C12—H12A109.5
C1—C2—H2A109.2C13—C12—H12B109.5
C3—C2—H2B109.2C11—C12—H12B109.5
C1—C2—H2B109.2H12A—C12—H12B108.1
H2A—C2—H2B107.9C12—C13—C17116.88 (14)
O1—C3—C4121.08 (17)C12—C13—C14108.82 (13)
O1—C3—C2122.11 (16)C17—C13—C14101.58 (13)
C4—C3—C2116.67 (14)C12—C13—C18111.33 (15)
C5—C4—C3123.90 (17)C17—C13—C18104.51 (13)
C5—C4—H4118.0C14—C13—C18113.48 (14)
C3—C4—H4118.0C8—C14—C13112.07 (13)
C4—C5—C6118.85 (16)C8—C14—C15120.43 (14)
C4—C5—C10123.31 (16)C13—C14—C15103.52 (13)
C6—C5—C10117.76 (14)C8—C14—H14106.7
C5—C6—C7112.89 (15)C13—C14—H14106.7
C5—C6—H6A109.0C15—C14—H14106.7
C7—C6—H6A109.0O3—C15—C14114.78 (14)
C5—C6—H6B109.0O3—C15—C16110.50 (15)
C7—C6—H6B109.0C14—C15—C16102.16 (15)
H6A—C6—H6B107.8O3—C15—H15109.7
C6—C7—C8110.18 (14)C14—C15—H15109.7
C6—C7—H7A109.6C16—C15—H15109.7
C8—C7—H7A109.6C17—C16—C15106.06 (15)
C6—C7—H7B109.6C17—C16—H16A110.5
C8—C7—H7B109.6C15—C16—H16A110.5
H7A—C7—H7B108.1C17—C16—H16B110.5
C14—C8—C7112.61 (13)C15—C16—H16B110.5
C14—C8—C9111.06 (13)H16A—C16—H16B108.7
C7—C8—C9108.46 (13)O4—C17—C16126.00 (17)
C14—C8—H8108.2O4—C17—C13126.01 (18)
C7—C8—H8108.2C16—C17—C13107.96 (15)
C9—C8—H8108.2C13—C18—H18A109.5
C11—C9—C8113.24 (13)C13—C18—H18B109.5
C11—C9—C10113.54 (12)H18A—C18—H18B109.5
C8—C9—C10110.80 (13)C13—C18—H18C109.5
C11—C9—H9106.2H18A—C18—H18C109.5
C8—C9—H9106.2H18B—C18—H18C109.5
C10—C9—H9106.2C10—C19—H19A109.5
C5—C10—C1108.55 (13)C10—C19—H19B109.5
C5—C10—C19107.05 (14)H19A—C19—H19B109.5
C1—C10—C19109.65 (15)C10—C19—H19C109.5
C5—C10—C9109.03 (13)H19A—C19—H19C109.5
C1—C10—C9111.13 (14)H19B—C19—H19C109.5
C10—C1—C2—C3−53.7 (2)C10—C9—C11—O2−69.69 (17)
C1—C2—C3—O1−155.82 (17)C8—C9—C11—C1243.52 (19)
C1—C2—C3—C428.3 (2)C10—C9—C11—C12171.00 (14)
O1—C3—C4—C5−174.15 (17)O2—C11—C12—C13−173.29 (13)
C2—C3—C4—C51.8 (3)C9—C11—C12—C13−51.13 (19)
C3—C4—C5—C6169.05 (16)C11—C12—C13—C17173.62 (14)
C3—C4—C5—C10−7.7 (3)C11—C12—C13—C1459.39 (18)
C4—C5—C6—C7136.19 (17)C11—C12—C13—C18−66.41 (17)
C10—C5—C6—C7−46.9 (2)C7—C8—C14—C13177.14 (14)
C5—C6—C7—C853.8 (2)C9—C8—C14—C1355.28 (18)
C6—C7—C8—C14174.60 (14)C7—C8—C14—C15−60.8 (2)
C6—C7—C8—C9−62.07 (19)C9—C8—C14—C15177.33 (15)
C14—C8—C9—C11−44.45 (18)C12—C13—C14—C8−63.21 (17)
C7—C8—C9—C11−168.71 (14)C17—C13—C14—C8172.92 (14)
C14—C8—C9—C10−173.35 (13)C18—C13—C14—C861.33 (18)
C7—C8—C9—C1062.39 (17)C12—C13—C14—C15165.52 (14)
C4—C5—C10—C1−16.8 (2)C17—C13—C14—C1541.65 (16)
C6—C5—C10—C1166.38 (16)C18—C13—C14—C15−69.93 (17)
C4—C5—C10—C19101.45 (19)C8—C14—C15—O373.1 (2)
C6—C5—C10—C19−75.32 (18)C13—C14—C15—O3−160.83 (14)
C4—C5—C10—C9−138.03 (16)C8—C14—C15—C16−167.34 (15)
C6—C5—C10—C945.2 (2)C13—C14—C15—C16−41.22 (17)
C2—C1—C10—C546.6 (2)O3—C15—C16—C17147.08 (15)
C2—C1—C10—C19−70.07 (19)C14—C15—C16—C1724.51 (18)
C2—C1—C10—C9166.46 (14)C15—C16—C17—O4179.09 (17)
C11—C9—C10—C5179.05 (13)C15—C16—C17—C131.08 (18)
C8—C9—C10—C5−52.21 (17)C12—C13—C17—O437.5 (2)
C11—C9—C10—C159.44 (18)C14—C13—C17—O4155.76 (17)
C8—C9—C10—C1−171.82 (14)C18—C13—C17—O4−86.0 (2)
C11—C9—C10—C19−63.08 (18)C12—C13—C17—C16−144.46 (16)
C8—C9—C10—C1965.66 (18)C14—C13—C17—C16−26.23 (17)
C8—C9—C11—O2162.83 (13)C18—C13—C17—C1692.00 (16)
D—H···AD—HH···AD···AD—H···A
O3—H3···O2i0.88 (3)1.94 (3)2.800 (2)164 (3)
O2—H2···O1ii0.81 (3)1.95 (3)2.7600 (19)180 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O2i0.88 (3)1.94 (3)2.800 (2)164 (3)
O2—H2⋯O1ii0.81 (3)1.95 (3)2.7600 (19)180 (3)

Symmetry codes: (i) ; (ii) .

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