Literature DB >> 22058777

2-Azido-1-(3,6-dichloro-9H-fluoren-1-yl)ethanone.

Hoong-Kun Fun, Tze Shyang Chia, Reshma Kayarmar, G K Nagaraja.   

Abstract

In the title compound, C(15)H(9)Cl(2)N(3)O, an intra-molecular C-H⋯O inter-action generates an S(7) ring motif. The cyclo-penta-1,3-diene ring forms dihedral angles of 1.93 (6) and 2.78 (6)° with its attached benzene rings. In the crystal, mol-ecules are linked by C-H⋯N and C-H⋯O hydrogen bonds, thereby forming layers lying parallel to the ac plane. The crystal also features a π-π inter-action with a centroid-centroid distance of 3.5612 (6) Å.

Entities:  

Year:  2011        PMID: 22058777      PMCID: PMC3201472          DOI: 10.1107/S1600536811036762

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the mutagenic activity of azides, see: Sander & Muehlbour (1977 ▶); Nilan et al. (1973 ▶); Owais et al. (1983 ▶). For the preparation of 1,2,3-triazoles via 1,3-dipolar cyclo­addition reactions of azides with substituted acetyl­ene compounds, see: Purvisis et al. (1984 ▶); Patei & Smalley (1984 ▶). For a related fused-ring structure, see: Molins et al. (2002 ▶). For related azide structures, see: Basanagouda et al. (2010 ▶); Karthikeyan et al. (2011 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For reference bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C15H9Cl2N3O M = 318.15 Monoclinic, a = 10.7303 (1) Å b = 18.7012 (3) Å c = 6.8952 (1) Å β = 98.61° V = 1368.06 (3) Å3 Z = 4 Mo Kα radiation μ = 0.48 mm−1 T = 100 K 0.35 × 0.21 × 0.14 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.850, T max = 0.936 15671 measured reflections 4003 independent reflections 3599 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.085 S = 1.03 4003 reflections 190 parameters H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811036762/hb6387sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811036762/hb6387Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811036762/hb6387Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H9Cl2N3OF(000) = 648
Mr = 318.15Dx = 1.545 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7886 reflections
a = 10.7303 (1) Åθ = 2.2–30.0°
b = 18.7012 (3) ŵ = 0.48 mm1
c = 6.8952 (1) ÅT = 100 K
β = 98.61°Block, yellow
V = 1368.06 (3) Å30.35 × 0.21 × 0.14 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer4003 independent reflections
Radiation source: fine-focus sealed tube3599 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 30.1°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −14→14
Tmin = 0.850, Tmax = 0.936k = −26→24
15671 measured reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0436P)2 + 0.561P] where P = (Fo2 + 2Fc2)/3
4003 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.33 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.86335 (3)0.015258 (16)0.78440 (5)0.02477 (8)
Cl20.69062 (3)0.556390 (16)0.75596 (5)0.02593 (9)
O10.41319 (8)0.27518 (5)0.49870 (12)0.02012 (18)
N10.19994 (10)0.32713 (6)0.62768 (18)0.0257 (2)
N20.18912 (9)0.26184 (6)0.63263 (15)0.0216 (2)
N30.16346 (11)0.20274 (7)0.6281 (2)0.0321 (3)
C10.82735 (10)0.22727 (6)0.76076 (15)0.0156 (2)
C20.88066 (10)0.15948 (6)0.78230 (16)0.0174 (2)
H2A0.96930.15330.81210.021*
C30.79995 (11)0.10118 (6)0.75884 (16)0.0176 (2)
C40.66945 (11)0.10914 (6)0.71603 (16)0.0175 (2)
H4A0.61660.06810.70160.021*
C50.61693 (10)0.17715 (6)0.69457 (16)0.0159 (2)
H5A0.52810.18290.66540.019*
C60.69576 (10)0.23714 (6)0.71629 (15)0.0143 (2)
C70.67029 (10)0.31487 (6)0.70872 (15)0.0143 (2)
C80.55863 (10)0.35588 (6)0.67711 (15)0.0155 (2)
C90.56735 (11)0.43036 (6)0.69421 (16)0.0181 (2)
H9A0.49270.45840.67650.022*
C100.68399 (11)0.46365 (7)0.73686 (16)0.0185 (2)
C110.79532 (11)0.42465 (7)0.76498 (16)0.0182 (2)
H11A0.87480.44780.79230.022*
C120.78680 (10)0.35082 (6)0.75198 (15)0.0156 (2)
C130.89409 (10)0.29828 (6)0.78215 (16)0.0165 (2)
H13A0.94420.30350.91410.020*
H13B0.95020.30430.68170.020*
C140.43135 (10)0.32382 (6)0.61632 (16)0.0164 (2)
C150.32381 (11)0.35493 (7)0.71116 (18)0.0207 (2)
H15A0.33910.34420.85330.025*
H15B0.32360.40760.69580.025*
U11U22U33U12U13U23
Cl10.02445 (15)0.01773 (15)0.03227 (16)0.00395 (10)0.00465 (11)0.00274 (11)
Cl20.03214 (17)0.01536 (15)0.02921 (16)−0.00146 (11)0.00100 (12)−0.00078 (11)
O10.0170 (4)0.0224 (4)0.0204 (4)−0.0007 (3)0.0008 (3)−0.0015 (3)
N10.0152 (5)0.0260 (6)0.0360 (6)0.0035 (4)0.0041 (4)0.0048 (5)
N20.0107 (4)0.0299 (6)0.0239 (5)0.0001 (4)0.0015 (3)0.0012 (4)
N30.0203 (5)0.0298 (7)0.0446 (7)−0.0036 (5)−0.0006 (5)0.0043 (5)
C10.0152 (5)0.0198 (6)0.0119 (5)−0.0006 (4)0.0026 (4)0.0003 (4)
C20.0157 (5)0.0205 (6)0.0161 (5)0.0016 (4)0.0028 (4)0.0005 (4)
C30.0205 (5)0.0169 (5)0.0158 (5)0.0023 (4)0.0041 (4)0.0014 (4)
C40.0189 (5)0.0174 (6)0.0164 (5)−0.0016 (4)0.0035 (4)0.0001 (4)
C50.0148 (5)0.0185 (5)0.0145 (5)−0.0009 (4)0.0023 (4)0.0006 (4)
C60.0152 (5)0.0175 (5)0.0106 (4)0.0007 (4)0.0029 (3)0.0005 (4)
C70.0150 (5)0.0173 (5)0.0111 (4)−0.0007 (4)0.0031 (3)−0.0001 (4)
C80.0155 (5)0.0187 (5)0.0125 (4)0.0003 (4)0.0026 (3)0.0001 (4)
C90.0202 (5)0.0187 (6)0.0154 (5)0.0017 (4)0.0027 (4)0.0006 (4)
C100.0244 (6)0.0150 (5)0.0159 (5)−0.0012 (4)0.0028 (4)−0.0006 (4)
C110.0195 (5)0.0192 (6)0.0156 (5)−0.0030 (4)0.0019 (4)−0.0003 (4)
C120.0159 (5)0.0187 (5)0.0123 (4)−0.0013 (4)0.0027 (4)0.0000 (4)
C130.0140 (4)0.0192 (5)0.0163 (5)−0.0010 (4)0.0021 (4)−0.0007 (4)
C140.0150 (5)0.0176 (5)0.0164 (5)0.0019 (4)0.0018 (4)0.0040 (4)
C150.0165 (5)0.0212 (6)0.0252 (6)0.0022 (4)0.0056 (4)0.0007 (4)
Cl1—C31.7436 (12)C6—C71.4787 (16)
Cl2—C101.7400 (13)C7—C121.4115 (15)
O1—C141.2147 (15)C7—C81.4117 (15)
N1—N21.2275 (16)C8—C91.3997 (17)
N1—C151.4627 (16)C8—C141.4930 (15)
N2—N31.1382 (17)C9—C101.3895 (16)
C1—C21.3896 (16)C9—H9A0.9500
C1—C61.4114 (15)C10—C111.3882 (17)
C1—C131.5055 (16)C11—C121.3856 (17)
C2—C31.3867 (17)C11—H11A0.9500
C2—H2A0.9500C12—C131.5042 (16)
C3—C41.3951 (16)C13—H13A0.9900
C4—C51.3901 (16)C13—H13B0.9900
C4—H4A0.9500C14—C151.5244 (16)
C5—C61.3995 (16)C15—H15A0.9900
C5—H5A0.9500C15—H15B0.9900
N2—N1—C15115.27 (10)C10—C9—H9A119.7
N3—N2—N1171.32 (12)C8—C9—H9A119.7
C2—C1—C6121.67 (11)C11—C10—C9121.55 (11)
C2—C1—C13127.74 (10)C11—C10—Cl2119.25 (9)
C6—C1—C13110.59 (10)C9—C10—Cl2119.21 (9)
C3—C2—C1117.70 (10)C12—C11—C10117.86 (11)
C3—C2—H2A121.2C12—C11—H11A121.1
C1—C2—H2A121.2C10—C11—H11A121.1
C2—C3—C4122.04 (11)C11—C12—C7122.41 (10)
C2—C3—Cl1119.03 (9)C11—C12—C13126.89 (10)
C4—C3—Cl1118.93 (9)C7—C12—C13110.70 (10)
C5—C4—C3119.88 (11)C12—C13—C1102.69 (9)
C5—C4—H4A120.1C12—C13—H13A111.2
C3—C4—H4A120.1C1—C13—H13A111.2
C4—C5—C6119.55 (10)C12—C13—H13B111.2
C4—C5—H5A120.2C1—C13—H13B111.2
C6—C5—H5A120.2H13A—C13—H13B109.1
C5—C6—C1119.17 (11)O1—C14—C8122.46 (10)
C5—C6—C7132.74 (10)O1—C14—C15121.08 (10)
C1—C6—C7108.05 (10)C8—C14—C15116.46 (10)
C12—C7—C8118.58 (11)N1—C15—C14113.40 (10)
C12—C7—C6107.91 (9)N1—C15—H15A108.9
C8—C7—C6133.44 (10)C14—C15—H15A108.9
C9—C8—C7118.89 (10)N1—C15—H15B108.9
C9—C8—C14118.04 (10)C14—C15—H15B108.9
C7—C8—C14123.01 (10)H15A—C15—H15B107.7
C10—C9—C8120.69 (11)
C6—C1—C2—C3−0.08 (16)C14—C8—C9—C10−175.49 (10)
C13—C1—C2—C3178.91 (10)C8—C9—C10—C11−0.36 (17)
C1—C2—C3—C4−0.31 (16)C8—C9—C10—Cl2179.77 (8)
C1—C2—C3—Cl1179.91 (8)C9—C10—C11—C12−0.91 (16)
C2—C3—C4—C50.37 (17)Cl2—C10—C11—C12178.96 (8)
Cl1—C3—C4—C5−179.85 (8)C10—C11—C12—C70.99 (16)
C3—C4—C5—C6−0.03 (16)C10—C11—C12—C13−178.30 (10)
C4—C5—C6—C1−0.35 (15)C8—C7—C12—C110.19 (16)
C4—C5—C6—C7−177.92 (10)C6—C7—C12—C11−177.22 (10)
C2—C1—C6—C50.41 (16)C8—C7—C12—C13179.58 (9)
C13—C1—C6—C5−178.74 (9)C6—C7—C12—C132.18 (12)
C2—C1—C6—C7178.53 (10)C11—C12—C13—C1176.92 (10)
C13—C1—C6—C7−0.62 (12)C7—C12—C13—C1−2.44 (11)
C5—C6—C7—C12176.80 (11)C2—C1—C13—C12−177.27 (10)
C1—C6—C7—C12−0.96 (11)C6—C1—C13—C121.82 (11)
C5—C6—C7—C8−0.1 (2)C9—C8—C14—O1137.71 (12)
C1—C6—C7—C8−177.82 (11)C7—C8—C14—O1−39.20 (16)
C12—C7—C8—C9−1.45 (15)C9—C8—C14—C15−42.76 (14)
C6—C7—C8—C9175.15 (11)C7—C8—C14—C15140.33 (11)
C12—C7—C8—C14175.44 (10)N2—N1—C15—C1456.63 (15)
C6—C7—C8—C14−7.96 (18)O1—C14—C15—N1−7.46 (16)
C7—C8—C9—C101.55 (16)C8—C14—C15—N1173.01 (10)
D—H···AD—HH···AD···AD—H···A
C5—H5A···O10.952.323.0134 (14)129
C13—H13A···N3i0.992.593.4613 (16)147
C15—H15A···O1ii0.992.533.1941 (15)125
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5A⋯O10.952.323.0134 (14)129
C13—H13A⋯N3i0.992.593.4613 (16)147
C15—H15A⋯O1ii0.992.533.1941 (15)125

Symmetry codes: (i) ; (ii) .

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