Literature DB >> 22058737

Ethyl 2-[2-(2-meth-oxy-phen-yl)hydrazinyl-idene]-3-oxobutano-ate.

Hoong-Kun Fun, Madhukar Hemamalini, Shobhitha Shetty, Balakrishna Kalluraya.   

Abstract

In the title compound, C(13)H(16)N(2)O(4), an intra-molecular N-H⋯O hydrogen bond generates an S(6) ring. The mol-ecule adopts an E configuration with respect to the central C=N double bond. In the crystal, symmetry-related mol-ecules are connected into chains along [010] via weak C-H⋯N hydrogen bonds. The crystal structure is further stabilized by weak C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 22058737      PMCID: PMC3201242          DOI: 10.1107/S1600536811034854

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details and applications of pyrazole derivatives, see: Rai et al. (2008 ▶); Girisha et al. (2010 ▶); Isloor et al. (2009 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C13H16N2O4 M = 264.28 Monoclinic, a = 10.1885 (4) Å b = 11.4967 (4) Å c = 13.2492 (5) Å β = 120.003 (3)° V = 1343.97 (9) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.75 × 0.27 × 0.20 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.931, T max = 0.981 14963 measured reflections 3909 independent reflections 3123 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.116 S = 1.03 3909 reflections 179 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.35 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811034854/lh5322sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034854/lh5322Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811034854/lh5322Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H16N2O4F(000) = 560
Mr = 264.28Dx = 1.306 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7354 reflections
a = 10.1885 (4) Åθ = 2.5–30.8°
b = 11.4967 (4) ŵ = 0.10 mm1
c = 13.2492 (5) ÅT = 100 K
β = 120.003 (3)°Needle, green
V = 1343.97 (9) Å30.75 × 0.27 × 0.20 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer3909 independent reflections
Radiation source: fine-focus sealed tube3123 reflections with I > 2σ(I)
graphiteRint = 0.028
φ and ω scansθmax = 30.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −14→13
Tmin = 0.931, Tmax = 0.981k = −16→16
14963 measured reflectionsl = −14→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0513P)2 + 0.4458P] where P = (Fo2 + 2Fc2)/3
3909 reflections(Δ/σ)max < 0.001
179 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.30 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.30643 (9)0.58032 (7)0.53563 (7)0.02056 (18)
O20.61515 (9)0.07478 (7)0.68475 (7)0.01987 (18)
O30.76423 (9)0.37484 (7)0.73708 (7)0.02157 (19)
O40.51710 (10)0.68753 (7)0.63602 (7)0.02266 (19)
N10.49890 (11)0.28280 (8)0.62667 (8)0.01539 (19)
N20.44571 (10)0.38868 (8)0.60104 (8)0.01477 (19)
C10.24246 (12)0.20271 (10)0.51384 (9)0.0164 (2)
H1A0.20100.27690.49370.020*
C20.14890 (13)0.10570 (10)0.47404 (10)0.0188 (2)
H2A0.04470.11470.42670.023*
C30.21166 (13)−0.00471 (10)0.50522 (10)0.0193 (2)
H3A0.1486−0.06950.47880.023*
C40.36743 (13)−0.02020 (10)0.57532 (10)0.0182 (2)
H4A0.4082−0.09460.59550.022*
C50.46119 (12)0.07678 (9)0.61481 (9)0.0155 (2)
C60.39815 (12)0.18864 (9)0.58381 (9)0.0149 (2)
C70.53715 (12)0.47955 (9)0.63721 (9)0.0154 (2)
C80.45682 (13)0.59306 (9)0.60453 (9)0.0160 (2)
C90.21993 (13)0.68756 (10)0.50635 (10)0.0211 (2)
H9A0.25280.74040.46630.025*
H9B0.23360.72540.57640.025*
C100.05623 (14)0.65495 (11)0.42841 (12)0.0297 (3)
H10A−0.00540.72370.40750.045*
H10B0.02550.60220.46890.045*
H10C0.04420.61820.35920.045*
C110.70375 (12)0.47143 (10)0.70367 (9)0.0172 (2)
C120.80061 (13)0.57743 (11)0.72907 (11)0.0232 (2)
H12A0.90490.55460.76330.035*
H12B0.78850.62670.78230.035*
H12C0.77060.61890.65790.035*
C130.68844 (14)−0.03669 (10)0.71190 (10)0.0215 (2)
H13A0.7964−0.02610.75430.032*
H13B0.6599−0.07820.64100.032*
H13C0.6581−0.08030.75860.032*
H1N10.5992 (19)0.2707 (14)0.6701 (14)0.037 (4)*
U11U22U33U12U13U23
O10.0175 (4)0.0120 (4)0.0265 (4)0.0022 (3)0.0067 (3)−0.0010 (3)
O20.0152 (4)0.0145 (4)0.0242 (4)0.0039 (3)0.0056 (3)0.0015 (3)
O30.0179 (4)0.0180 (4)0.0241 (4)0.0013 (3)0.0069 (3)0.0013 (3)
O40.0229 (4)0.0128 (4)0.0280 (4)−0.0026 (3)0.0095 (4)−0.0013 (3)
N10.0153 (4)0.0113 (4)0.0177 (4)0.0009 (4)0.0068 (4)0.0009 (3)
N20.0182 (4)0.0114 (4)0.0149 (4)0.0006 (3)0.0084 (4)0.0001 (3)
C10.0168 (5)0.0132 (5)0.0191 (5)0.0030 (4)0.0088 (4)0.0021 (4)
C20.0160 (5)0.0173 (5)0.0224 (5)−0.0001 (4)0.0092 (4)−0.0001 (4)
C30.0202 (5)0.0144 (5)0.0233 (5)−0.0034 (4)0.0108 (5)−0.0019 (4)
C40.0224 (6)0.0116 (5)0.0208 (5)0.0010 (4)0.0111 (4)0.0006 (4)
C50.0163 (5)0.0139 (5)0.0158 (5)0.0021 (4)0.0077 (4)0.0006 (4)
C60.0173 (5)0.0122 (5)0.0163 (5)−0.0005 (4)0.0092 (4)−0.0002 (4)
C70.0168 (5)0.0133 (5)0.0150 (5)−0.0002 (4)0.0071 (4)0.0002 (4)
C80.0182 (5)0.0140 (5)0.0158 (5)−0.0001 (4)0.0085 (4)0.0001 (4)
C90.0210 (6)0.0122 (5)0.0272 (6)0.0038 (4)0.0100 (5)−0.0004 (4)
C100.0205 (6)0.0212 (6)0.0420 (7)0.0040 (5)0.0116 (6)0.0000 (5)
C110.0170 (5)0.0177 (5)0.0152 (5)−0.0010 (4)0.0067 (4)−0.0007 (4)
C120.0184 (5)0.0204 (6)0.0264 (6)−0.0038 (5)0.0078 (5)0.0001 (5)
C130.0215 (6)0.0192 (6)0.0243 (6)0.0081 (5)0.0119 (5)0.0052 (4)
O1—C81.3430 (14)C4—H4A0.9300
O1—C91.4510 (13)C5—C61.4041 (15)
O2—C51.3660 (13)C7—C111.4732 (16)
O2—C131.4355 (13)C7—C81.4852 (15)
O3—C111.2393 (13)C9—C101.5053 (17)
O4—C81.2143 (13)C9—H9A0.9700
N1—N21.3064 (12)C9—H9B0.9700
N1—C61.4019 (14)C10—H10A0.9600
N1—H1N10.898 (17)C10—H10B0.9600
N2—C71.3201 (14)C10—H10C0.9600
C1—C21.3885 (15)C11—C121.4967 (16)
C1—C61.3896 (15)C12—H12A0.9600
C1—H1A0.9300C12—H12B0.9600
C2—C31.3880 (16)C12—H12C0.9600
C2—H2A0.9300C13—H13A0.9600
C3—C41.3925 (16)C13—H13B0.9600
C3—H3A0.9300C13—H13C0.9600
C4—C51.3891 (15)
C8—O1—C9115.03 (9)O1—C8—C7112.17 (9)
C5—O2—C13117.52 (9)O1—C9—C10106.76 (9)
N2—N1—C6119.32 (9)O1—C9—H9A110.4
N2—N1—H1N1120.1 (11)C10—C9—H9A110.4
C6—N1—H1N1120.6 (11)O1—C9—H9B110.4
N1—N2—C7121.15 (9)C10—C9—H9B110.4
C2—C1—C6119.85 (10)H9A—C9—H9B108.6
C2—C1—H1A120.1C9—C10—H10A109.5
C6—C1—H1A120.1C9—C10—H10B109.5
C3—C2—C1119.66 (10)H10A—C10—H10B109.5
C3—C2—H2A120.2C9—C10—H10C109.5
C1—C2—H2A120.2H10A—C10—H10C109.5
C2—C3—C4121.15 (10)H10B—C10—H10C109.5
C2—C3—H3A119.4O3—C11—C7119.26 (10)
C4—C3—H3A119.4O3—C11—C12119.68 (10)
C5—C4—C3119.23 (10)C7—C11—C12121.05 (10)
C5—C4—H4A120.4C11—C12—H12A109.5
C3—C4—H4A120.4C11—C12—H12B109.5
O2—C5—C4125.60 (10)H12A—C12—H12B109.5
O2—C5—C6114.58 (9)C11—C12—H12C109.5
C4—C5—C6119.81 (10)H12A—C12—H12C109.5
C1—C6—N1122.73 (10)H12B—C12—H12C109.5
C1—C6—C5120.29 (10)O2—C13—H13A109.5
N1—C6—C5116.98 (9)O2—C13—H13B109.5
N2—C7—C11124.05 (10)H13A—C13—H13B109.5
N2—C7—C8113.80 (9)O2—C13—H13C109.5
C11—C7—C8122.15 (10)H13A—C13—H13C109.5
O4—C8—O1122.70 (10)H13B—C13—H13C109.5
O4—C8—C7125.13 (10)
C6—N1—N2—C7−178.24 (9)C4—C5—C6—N1179.90 (10)
C6—C1—C2—C30.46 (16)N1—N2—C7—C112.76 (16)
C1—C2—C3—C4−0.43 (17)N1—N2—C7—C8−177.39 (9)
C2—C3—C4—C50.18 (17)C9—O1—C8—O4−3.10 (15)
C13—O2—C5—C45.71 (15)C9—O1—C8—C7176.32 (9)
C13—O2—C5—C6−174.96 (9)N2—C7—C8—O4174.02 (10)
C3—C4—C5—O2179.33 (10)C11—C7—C8—O4−6.12 (17)
C3—C4—C5—C60.03 (16)N2—C7—C8—O1−5.37 (13)
C2—C1—C6—N1179.86 (10)C11—C7—C8—O1174.48 (9)
C2—C1—C6—C5−0.26 (15)C8—O1—C9—C10179.35 (10)
N2—N1—C6—C10.42 (15)N2—C7—C11—O3−6.31 (16)
N2—N1—C6—C5−179.46 (9)C8—C7—C11—O3173.85 (10)
O2—C5—C6—C1−179.36 (9)N2—C7—C11—C12172.36 (10)
C4—C5—C6—C10.01 (15)C8—C7—C11—C12−7.48 (15)
O2—C5—C6—N10.53 (13)
Cg1 is the centroid of the C1–C6 ring.
D—H···AD—HH···AD···AD—H···A
N1—H1N1···O30.90 (2)1.886 (19)2.5715 (15)131.6 (14)
C13—H13C···N2i0.962.583.4835 (18)156
C12—H12B···Cg1ii0.962.923.6620 (15)135
C13—H13B···Cg1iii0.962.663.4887 (14)145
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N1⋯O30.90 (2)1.886 (19)2.5715 (15)131.6 (14)
C13—H13C⋯N2i0.962.583.4835 (18)156
C12—H12BCg1ii0.962.923.6620 (15)135
C13—H13BCg1iii0.962.663.4887 (14)145

Symmetry codes: (i) ; (ii) ; (iii) .

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1.  Ethyl 2-[2-(3-meth-oxy-phen-yl)hydrazinyl-idene]-3-oxobutano-ate.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30
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