Literature DB >> 22058730

2-Phenyl-3-(trimethyl-sil-yl)propan-1-aminium chloride.

Yousef M Hijji, Ray J Butcher, Jerry P Jasinski, Zachary White, Robert C Rosenberg.   

Abstract

The title compound, C(12)H(22)NSi(+)·Cl(-), contains two formula units in the asymmetric unit and is a hydro-chloride salt in which the amine N atom is protonated and the NH(3) (+) group forms hydrogen bonds with the Cl(-) anion, forming a ribbon in the c-axis direction.

Entities:  

Year:  2011        PMID: 22058730      PMCID: PMC3201342          DOI: 10.1107/S1600536811035410

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For silicon-substituted β-phenyl­ethyl amine and its biological activity, see: Frankel et al. (1968 ▶). For applications of β-phenyl­ethyl amine in alkaloid synthesis via the Pictet–Spengler reaction, see: Lorenz et al. (2010 ▶). For uses and applications of 3-amino-propyl­silanes in nano technology and self-assembled monolayers, see: Li et al. (2009 ▶) and in reverse ionic liquids in oil extraction, see: Blasucci et al. (2010 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C12H22NSiCl− M = 243.85 Monoclinic, a = 12.3716 (4) Å b = 32.6920 (8) Å c = 7.44256 (18) Å β = 93.006 (2)° V = 3006.01 (14) Å3 Z = 8 Cu Kα radiation μ = 2.79 mm−1 T = 295 K 0.47 × 0.10 × 0.06 mm

Data collection

Oxford Diffraction Xcalibur Ruby Gemini diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.370, T max = 1.000 11195 measured reflections 5882 independent reflections 3078 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.076 wR(F 2) = 0.276 S = 1.14 5882 reflections 279 parameters H-atom parameters constrained Δρmax = 0.72 e Å−3 Δρmin = −0.49 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811035410/hg5087sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811035410/hg5087Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811035410/hg5087Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H22NSi+·ClF(000) = 1056
Mr = 243.85Dx = 1.078 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ybcCell parameters from 3131 reflections
a = 12.3716 (4) Åθ = 4.5–75.7°
b = 32.6920 (8) ŵ = 2.79 mm1
c = 7.44256 (18) ÅT = 295 K
β = 93.006 (2)°Needle, colorless
V = 3006.01 (14) Å30.47 × 0.10 × 0.06 mm
Z = 8
Oxford Diffraction Xcalibur Ruby Gemini diffractometer5882 independent reflections
Radiation source: Enhance (Cu) X-ray Source3078 reflections with I > 2σ(I)
graphiteRint = 0.049
Detector resolution: 10.5081 pixels mm-1θmax = 76.0°, θmin = 4.5°
ω scansh = −15→15
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −40→38
Tmin = 0.370, Tmax = 1.000l = −9→8
11195 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.076Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.276H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.1129P)2 + 1.1585P] where P = (Fo2 + 2Fc2)/3
5882 reflections(Δ/σ)max = 0.001
279 parametersΔρmax = 0.72 e Å3
0 restraintsΔρmin = −0.49 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.51262 (14)0.70004 (5)0.46785 (17)0.0747 (4)
Cl20.24050 (12)0.70213 (4)−0.04653 (17)0.0658 (4)
Si1A0.87067 (14)0.68876 (5)0.88371 (19)0.0642 (4)
N1A0.4863 (4)0.70536 (13)0.8840 (5)0.0643 (11)
H1AA0.41500.70500.89430.096*
H1AB0.50080.70410.76820.096*
H1AC0.51350.72840.93140.096*
C1A0.6903 (5)0.62195 (16)1.0207 (6)0.0592 (13)
C2A0.7098 (6)0.58664 (18)0.9246 (8)0.0757 (17)
H2AA0.69820.58640.80010.091*
C3A0.7464 (7)0.5518 (2)1.0127 (10)0.099 (2)
H3AA0.75780.52820.94670.118*
C4A0.7661 (7)0.5512 (2)1.1946 (10)0.103 (2)
H4AA0.79310.52781.25180.123*
C5A0.7459 (6)0.5855 (2)1.2916 (8)0.089 (2)
H5AA0.75830.58531.41590.107*
C6A0.7070 (5)0.62050 (18)1.2066 (7)0.0709 (15)
H6AA0.69180.64341.27490.085*
C7A0.5364 (5)0.66953 (18)0.9814 (7)0.0670 (15)
H7AA0.49160.64560.95760.080*
H7AB0.53810.67481.10980.080*
C8A0.6509 (4)0.66056 (15)0.9266 (6)0.0553 (12)
H8AA0.64630.65470.79720.066*
C9A0.7297 (4)0.69618 (16)0.9563 (7)0.0582 (12)
H9AA0.73380.70271.08370.070*
H9AB0.69920.71980.89340.070*
C10A0.9367 (6)0.73979 (18)0.8718 (7)0.0756 (16)
H10A0.95430.74960.99140.113*
H10B0.88820.75870.81030.113*
H10C1.00170.73740.80760.113*
C11A0.8624 (6)0.6646 (2)0.6552 (9)0.092 (2)
H11A0.81520.68050.57600.138*
H11B0.83460.63730.66380.138*
H11C0.93330.66370.60870.138*
C12A0.9525 (6)0.6562 (2)1.0466 (9)0.093 (2)
H12A0.94670.66671.16620.140*
H12B1.02700.65661.01620.140*
H12C0.92590.62861.04090.140*
Si1B0.36327 (18)0.56463 (5)0.3612 (3)0.0814 (5)
N1B0.2550 (4)0.70271 (12)0.3793 (6)0.0649 (12)
H1BA0.23790.72810.41030.097*
H1BB0.24640.70000.26040.097*
H1BC0.32360.69760.41420.097*
C1B0.1599 (6)0.60320 (17)0.5886 (8)0.0731 (16)
C2B0.0698 (7)0.5861 (2)0.4979 (11)0.097 (2)
H2BA0.05300.59280.37830.116*
C3B0.0038 (7)0.5584 (2)0.5886 (14)0.113 (3)
H3BA−0.05590.54660.52760.136*
C4B0.0263 (9)0.5491 (3)0.7602 (14)0.115 (3)
H4BA−0.01730.53060.81810.137*
C5B0.1124 (10)0.5663 (3)0.8517 (11)0.118 (3)
H5BA0.12650.55990.97240.142*
C6B0.1802 (7)0.5935 (2)0.7679 (9)0.092 (2)
H6BA0.23880.60520.83230.110*
C7B0.1835 (4)0.67343 (15)0.4673 (7)0.0575 (12)
H7BA0.11680.67030.39400.069*
H7BB0.16520.68430.58310.069*
C8B0.2369 (6)0.63141 (17)0.4947 (7)0.0717 (16)
H8BA0.29880.63570.58040.086*
C9B0.2827 (6)0.61330 (18)0.3298 (8)0.0767 (17)
H9BA0.32880.63370.27780.092*
H9BB0.22320.60800.24280.092*
C10B0.4703 (9)0.5713 (3)0.5428 (13)0.140 (4)
H10D0.52530.55100.53080.210*
H10E0.43920.56850.65760.210*
H10F0.50170.59810.53390.210*
C11B0.4268 (8)0.5546 (2)0.1443 (11)0.115 (3)
H11D0.46940.53000.15460.173*
H11E0.47250.57710.11620.173*
H11F0.37140.55130.05030.173*
C12B0.2769 (8)0.52048 (19)0.4136 (12)0.120 (3)
H12D0.31900.49580.41230.181*
H12E0.21770.51860.32520.181*
H12F0.24910.52410.53060.181*
U11U22U33U12U13U23
Cl10.0932 (11)0.0737 (9)0.0567 (7)0.0071 (8)−0.0001 (6)−0.0029 (6)
Cl20.0764 (9)0.0589 (7)0.0617 (7)−0.0045 (7)−0.0010 (6)0.0030 (5)
Si1A0.0727 (10)0.0614 (9)0.0584 (8)−0.0013 (8)0.0027 (7)−0.0008 (6)
N1A0.069 (3)0.068 (3)0.056 (2)0.006 (2)0.000 (2)−0.001 (2)
C1A0.071 (3)0.058 (3)0.050 (2)−0.004 (3)0.003 (2)0.003 (2)
C2A0.105 (5)0.058 (3)0.065 (3)−0.002 (3)0.006 (3)−0.006 (3)
C3A0.135 (7)0.055 (4)0.107 (5)0.009 (4)0.018 (5)−0.006 (3)
C4A0.140 (8)0.072 (4)0.097 (5)0.015 (5)0.008 (5)0.026 (4)
C5A0.108 (6)0.092 (5)0.067 (3)0.021 (4)−0.003 (3)0.021 (3)
C6A0.085 (4)0.067 (3)0.060 (3)0.009 (3)−0.004 (3)0.002 (3)
C7A0.078 (4)0.072 (4)0.051 (2)0.009 (3)0.002 (2)0.007 (2)
C8A0.060 (3)0.060 (3)0.046 (2)0.007 (2)0.001 (2)−0.002 (2)
C9A0.057 (3)0.059 (3)0.058 (3)0.002 (2)−0.004 (2)0.000 (2)
C10A0.092 (5)0.071 (4)0.064 (3)−0.010 (3)0.010 (3)0.001 (3)
C11A0.102 (5)0.092 (5)0.086 (4)−0.011 (4)0.033 (4)−0.028 (4)
C12A0.095 (5)0.077 (4)0.105 (5)0.007 (4)−0.017 (4)0.018 (4)
Si1B0.1019 (14)0.0555 (9)0.0882 (11)0.0095 (10)0.0187 (10)0.0047 (8)
N1B0.086 (3)0.048 (2)0.060 (2)0.001 (2)−0.010 (2)0.0017 (18)
C1B0.090 (5)0.048 (3)0.082 (4)0.003 (3)0.006 (3)−0.001 (3)
C2B0.101 (6)0.081 (5)0.108 (5)0.017 (4)0.003 (4)0.017 (4)
C3B0.097 (6)0.079 (5)0.162 (8)0.000 (5)−0.003 (6)0.013 (5)
C4B0.128 (8)0.080 (5)0.140 (8)−0.004 (5)0.043 (6)0.017 (5)
C5B0.180 (10)0.089 (6)0.091 (5)−0.012 (6)0.048 (6)0.005 (4)
C6B0.128 (6)0.073 (4)0.076 (4)−0.012 (4)0.018 (4)−0.002 (3)
C7B0.061 (3)0.049 (3)0.062 (3)−0.005 (2)−0.004 (2)−0.001 (2)
C8B0.095 (5)0.053 (3)0.067 (3)0.002 (3)0.006 (3)0.006 (2)
C9B0.096 (5)0.060 (3)0.074 (3)0.000 (3)0.005 (3)0.005 (3)
C10B0.148 (9)0.140 (9)0.128 (7)0.027 (7)−0.026 (7)−0.006 (6)
C11B0.154 (8)0.082 (5)0.114 (6)−0.010 (5)0.039 (6)−0.005 (4)
C12B0.172 (9)0.048 (4)0.148 (7)0.012 (5)0.070 (6)0.012 (4)
Si1A—C10A1.862 (6)Si1B—C12B1.850 (8)
Si1A—C9A1.868 (6)Si1B—C10B1.855 (9)
Si1A—C12A1.870 (6)Si1B—C11B1.861 (8)
Si1A—C11A1.872 (6)Si1B—C9B1.886 (6)
N1A—C7A1.495 (6)N1B—C7B1.479 (7)
N1A—H1AA0.8900N1B—H1BA0.8900
N1A—H1AB0.8900N1B—H1BB0.8900
N1A—H1AC0.8900N1B—H1BC0.8900
C1A—C2A1.386 (7)C1B—C6B1.381 (9)
C1A—C6A1.389 (7)C1B—C2B1.391 (10)
C1A—C8A1.512 (7)C1B—C8B1.522 (8)
C2A—C3A1.380 (9)C2B—C3B1.414 (11)
C2A—H2AA0.9300C2B—H2BA0.9300
C3A—C4A1.363 (10)C3B—C4B1.328 (12)
C3A—H3AA0.9300C3B—H3BA0.9300
C4A—C5A1.364 (10)C4B—C5B1.357 (13)
C4A—H4AA0.9300C4B—H4BA0.9300
C5A—C6A1.381 (8)C5B—C6B1.393 (11)
C5A—H5AA0.9300C5B—H5BA0.9300
C6A—H6AA0.9300C6B—H6BA0.9300
C7A—C8A1.523 (8)C7B—C8B1.534 (7)
C7A—H7AA0.9700C7B—H7BA0.9700
C7A—H7AB0.9700C7B—H7BB0.9700
C8A—C9A1.527 (7)C8B—C9B1.500 (8)
C8A—H8AA0.9800C8B—H8BA0.9800
C9A—H9AA0.9700C9B—H9BA0.9700
C9A—H9AB0.9700C9B—H9BB0.9700
C10A—H10A0.9600C10B—H10D0.9600
C10A—H10B0.9600C10B—H10E0.9600
C10A—H10C0.9600C10B—H10F0.9600
C11A—H11A0.9600C11B—H11D0.9600
C11A—H11B0.9600C11B—H11E0.9600
C11A—H11C0.9600C11B—H11F0.9600
C12A—H12A0.9600C12B—H12D0.9600
C12A—H12B0.9600C12B—H12E0.9600
C12A—H12C0.9600C12B—H12F0.9600
C10A—Si1A—C9A108.4 (3)C12B—Si1B—C10B109.7 (5)
C10A—Si1A—C12A108.5 (3)C12B—Si1B—C11B108.7 (4)
C9A—Si1A—C12A111.6 (3)C10B—Si1B—C11B109.6 (5)
C10A—Si1A—C11A109.7 (3)C12B—Si1B—C9B112.1 (4)
C9A—Si1A—C11A108.1 (3)C10B—Si1B—C9B110.1 (4)
C12A—Si1A—C11A110.5 (4)C11B—Si1B—C9B106.7 (3)
C7A—N1A—H1AA109.5C7B—N1B—H1BA109.5
C7A—N1A—H1AB109.5C7B—N1B—H1BB109.5
H1AA—N1A—H1AB109.5H1BA—N1B—H1BB109.5
C7A—N1A—H1AC109.5C7B—N1B—H1BC109.5
H1AA—N1A—H1AC109.5H1BA—N1B—H1BC109.5
H1AB—N1A—H1AC109.5H1BB—N1B—H1BC109.5
C2A—C1A—C6A117.7 (5)C6B—C1B—C2B118.5 (7)
C2A—C1A—C8A121.1 (4)C6B—C1B—C8B119.7 (6)
C6A—C1A—C8A121.2 (5)C2B—C1B—C8B121.8 (6)
C3A—C2A—C1A120.3 (6)C1B—C2B—C3B119.6 (8)
C3A—C2A—H2AA119.8C1B—C2B—H2BA120.2
C1A—C2A—H2AA119.8C3B—C2B—H2BA120.2
C4A—C3A—C2A121.3 (6)C4B—C3B—C2B120.6 (9)
C4A—C3A—H3AA119.3C4B—C3B—H3BA119.7
C2A—C3A—H3AA119.3C2B—C3B—H3BA119.7
C3A—C4A—C5A119.1 (7)C3B—C4B—C5B120.4 (9)
C3A—C4A—H4AA120.4C3B—C4B—H4BA119.8
C5A—C4A—H4AA120.4C5B—C4B—H4BA119.8
C4A—C5A—C6A120.5 (6)C4B—C5B—C6B121.1 (8)
C4A—C5A—H5AA119.8C4B—C5B—H5BA119.5
C6A—C5A—H5AA119.8C6B—C5B—H5BA119.5
C5A—C6A—C1A121.0 (6)C1B—C6B—C5B119.7 (8)
C5A—C6A—H6AA119.5C1B—C6B—H6BA120.1
C1A—C6A—H6AA119.5C5B—C6B—H6BA120.1
N1A—C7A—C8A112.8 (4)N1B—C7B—C8B112.0 (5)
N1A—C7A—H7AA109.0N1B—C7B—H7BA109.2
C8A—C7A—H7AA109.0C8B—C7B—H7BA109.2
N1A—C7A—H7AB109.0N1B—C7B—H7BB109.2
C8A—C7A—H7AB109.0C8B—C7B—H7BB109.2
H7AA—C7A—H7AB107.8H7BA—C7B—H7BB107.9
C1A—C8A—C7A108.5 (4)C9B—C8B—C1B114.1 (5)
C1A—C8A—C9A112.4 (4)C9B—C8B—C7B115.0 (5)
C7A—C8A—C9A114.2 (4)C1B—C8B—C7B109.1 (5)
C1A—C8A—H8AA107.1C9B—C8B—H8BA105.9
C7A—C8A—H8AA107.1C1B—C8B—H8BA105.9
C9A—C8A—H8AA107.1C7B—C8B—H8BA105.9
C8A—C9A—Si1A117.2 (4)C8B—C9B—Si1B116.8 (4)
C8A—C9A—H9AA108.0C8B—C9B—H9BA108.1
Si1A—C9A—H9AA108.0Si1B—C9B—H9BA108.1
C8A—C9A—H9AB108.0C8B—C9B—H9BB108.1
Si1A—C9A—H9AB108.0Si1B—C9B—H9BB108.1
H9AA—C9A—H9AB107.2H9BA—C9B—H9BB107.3
Si1A—C10A—H10A109.5Si1B—C10B—H10D109.5
Si1A—C10A—H10B109.5Si1B—C10B—H10E109.5
H10A—C10A—H10B109.5H10D—C10B—H10E109.5
Si1A—C10A—H10C109.5Si1B—C10B—H10F109.5
H10A—C10A—H10C109.5H10D—C10B—H10F109.5
H10B—C10A—H10C109.5H10E—C10B—H10F109.5
Si1A—C11A—H11A109.5Si1B—C11B—H11D109.5
Si1A—C11A—H11B109.5Si1B—C11B—H11E109.5
H11A—C11A—H11B109.5H11D—C11B—H11E109.5
Si1A—C11A—H11C109.5Si1B—C11B—H11F109.5
H11A—C11A—H11C109.5H11D—C11B—H11F109.5
H11B—C11A—H11C109.5H11E—C11B—H11F109.5
Si1A—C12A—H12A109.5Si1B—C12B—H12D109.5
Si1A—C12A—H12B109.5Si1B—C12B—H12E109.5
H12A—C12A—H12B109.5H12D—C12B—H12E109.5
Si1A—C12A—H12C109.5Si1B—C12B—H12F109.5
H12A—C12A—H12C109.5H12D—C12B—H12F109.5
H12B—C12A—H12C109.5H12E—C12B—H12F109.5
C6A—C1A—C2A—C3A−1.1 (10)C6B—C1B—C2B—C3B−2.1 (11)
C8A—C1A—C2A—C3A179.6 (6)C8B—C1B—C2B—C3B176.7 (7)
C1A—C2A—C3A—C4A−1.2 (12)C1B—C2B—C3B—C4B1.0 (13)
C2A—C3A—C4A—C5A2.2 (14)C2B—C3B—C4B—C5B0.6 (15)
C3A—C4A—C5A—C6A−0.7 (13)C3B—C4B—C5B—C6B−1.1 (15)
C4A—C5A—C6A—C1A−1.6 (12)C2B—C1B—C6B—C5B1.7 (11)
C2A—C1A—C6A—C5A2.5 (10)C8B—C1B—C6B—C5B−177.2 (7)
C8A—C1A—C6A—C5A−178.2 (6)C4B—C5B—C6B—C1B−0.1 (13)
C2A—C1A—C8A—C7A113.5 (6)C6B—C1B—C8B—C9B123.7 (7)
C6A—C1A—C8A—C7A−65.8 (7)C2B—C1B—C8B—C9B−55.1 (9)
C2A—C1A—C8A—C9A−119.2 (6)C6B—C1B—C8B—C7B−106.0 (7)
C6A—C1A—C8A—C9A61.6 (7)C2B—C1B—C8B—C7B75.2 (7)
N1A—C7A—C8A—C1A−175.4 (4)N1B—C7B—C8B—C9B−51.3 (7)
N1A—C7A—C8A—C9A58.3 (6)N1B—C7B—C8B—C1B179.0 (4)
C1A—C8A—C9A—Si1A58.3 (5)C1B—C8B—C9B—Si1B−59.5 (7)
C7A—C8A—C9A—Si1A−177.4 (3)C7B—C8B—C9B—Si1B173.2 (4)
C10A—Si1A—C9A—C8A163.8 (4)C12B—Si1B—C9B—C8B70.1 (6)
C12A—Si1A—C9A—C8A−76.8 (4)C10B—Si1B—C9B—C8B−52.3 (7)
C11A—Si1A—C9A—C8A44.9 (5)C11B—Si1B—C9B—C8B−171.1 (6)
D—H···AD—HH···AD···AD—H···A
N1A—H1AA···Cl2i0.892.233.114 (5)173.
N1A—H1AB···Cl10.892.253.136 (4)172.
N1A—H1AC···Cl1ii0.892.363.168 (5)152.
N1B—H1BA···Cl2ii0.892.303.166 (4)163.
N1B—H1BB···Cl20.892.283.165 (4)171.
N1B—H1BC···Cl10.892.353.222 (5)165.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1A—H1AA⋯Cl2i0.892.233.114 (5)173
N1A—H1AB⋯Cl10.892.253.136 (4)172
N1A—H1AC⋯Cl1ii0.892.363.168 (5)152
N1B—H1BA⋯Cl2ii0.892.303.166 (4)163
N1B—H1BB⋯Cl20.892.283.165 (4)171
N1B—H1BC⋯Cl10.892.353.222 (5)165

Symmetry codes: (i) ; (ii) .

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1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

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Authors:  Jie-Ren Li; Kathie L Lusker; Jing-Jiang Yu; Jayne C Garno
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1.  2-(4-Hy-droxy-phen-yl)-3-(trimethyl-sil-yl)propanaminium chloride.

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