Literature DB >> 22058722

Disodium diaqua-bis-(methyl-enedi-phos-pho-nato-κO,O')cobaltate(II) dihydrate.

Kina van Merwe1, Hendrik G Visser, Johan A Venter.   

Abstract

In the title compound, Na(2)[Co(CH(4)O(6)P(2))(2)(H(2)O)(2)]·2H(2)O, the asymmetric unit is composed of one methyl-enediphospho-nate ligand and one water mol-ecule, which both are coordinated to a Co(II) atom, as well as a non-coordinated water mol-ecule and a sodium cation. The Co(II) atom occupies a special position on a crystallographic inversion centre. The slightly distorted Co(II)O(6) octa-hedral coordination environment is composed of two bidentate methyl-enediphospho-nate ligands and two coordinated water mol-ecules in trans positions. The sodium ion is octa-hedrally coordinated to six O atoms with Na-O distances ranging from 2.3149 (12) to 2.6243 (12) Å. An extensive three-dimensional network of inter-molecular as well as intra-molecular O-H⋯O and C-H⋯O hydrogen bonding inter-acions is present.

Entities:  

Year:  2011        PMID: 22058722      PMCID: PMC3201543          DOI: 10.1107/S1600536811038530

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to organic diphospho­nic acids, see: Vega et al. (1996 ▶). For related structures, see: Bon et al. (2010 ▶); DeLaMatter et al. (1973 ▶); Harmony et al. (1984 ▶); Jurisson et al. (1983 ▶); Van der Merwe et al. (2010 ▶). For bond lengths and angles in related structures, see: Bao et al. (2003 ▶); Cao et al. (2007 ▶); Gong et al. (2006 ▶); Van der Merwe et al. (2009 ▶); Visser et al. (2010 ▶); Yin et al. (2003 ▶).

Experimental

Crystal data

Na2[Co(CH4O6P2)2(H2O)22H2O M = 524.94 Monoclinic, a = 6.8694 (2) Å b = 13.2860 (4) Å c = 8.3541 (3) Å β = 91.375 (1)° V = 762.23 (4) Å3 Z = 2 Mo Kα radiation μ = 1.69 mm−1 T = 100 K 0.52 × 0.24 × 0.09 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS, Bruker, 2007 ▶) T min = 0.474, T max = 0.863 8742 measured reflections 1901 independent reflections 1838 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.019 wR(F 2) = 0.055 S = 1.13 1901 reflections 146 parameters 7 restraints All H-atom parameters refined Δρmax = 0.36 e Å−3 Δρmin = −0.57 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT-Plus (Bruker, 2007 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811038530/wm2520sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811038530/wm2520Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Na2[Co(CH4O6P2)2(H2O)2]·2H2OF(000) = 530
Mr = 524.94Dx = 2.287 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6202 reflections
a = 6.8694 (2) Åθ = 2.9–28.4°
b = 13.2860 (4) ŵ = 1.69 mm1
c = 8.3541 (3) ÅT = 100 K
β = 91.375 (1)°Plate, pink
V = 762.23 (4) Å30.52 × 0.24 × 0.09 mm
Z = 2
Bruker APEXII CCD diffractometer1838 reflections with I > 2σ(I)
phi and ω scansRint = 0.022
Absorption correction: multi-scan (SADABS, Bruker, 2007)θmax = 28.4°, θmin = 3.1°
Tmin = 0.474, Tmax = 0.863h = −8→9
8742 measured reflectionsk = −17→16
1901 independent reflectionsl = −11→8
Refinement on F27 restraints
Least-squares matrix: fullAll H-atom parameters refined
R[F2 > 2σ(F2)] = 0.019w = 1/[σ2(Fo2) + (0.0289P)2 + 0.4299P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.055(Δ/σ)max = 0.001
S = 1.13Δρmax = 0.36 e Å3
1901 reflectionsΔρmin = −0.57 e Å3
146 parameters
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
xyzUiso*/Ueq
Co10.50.50.50.00488 (8)
P10.43774 (5)0.30632 (3)0.26142 (4)0.00528 (9)
P20.17626 (5)0.48657 (3)0.20454 (4)0.00578 (9)
Na10.06611 (8)0.75775 (4)0.22722 (7)0.01006 (13)
O10.33424 (15)0.45566 (8)0.69412 (12)0.0092 (2)
O20.52678 (14)0.35119 (7)0.41366 (11)0.00758 (19)
O30.61219 (15)0.25484 (8)0.17312 (12)0.0084 (2)
O40.27445 (14)0.23364 (8)0.28565 (12)0.0087 (2)
O50.17550 (15)0.58645 (8)0.10142 (12)0.0091 (2)
O6−0.02026 (14)0.43517 (8)0.18700 (11)0.00828 (19)
O70.23609 (15)0.51625 (8)0.37290 (12)0.0081 (2)
O80.02069 (15)0.67436 (8)0.47388 (12)0.0114 (2)
C10.3604 (2)0.40539 (10)0.12696 (15)0.0072 (2)
H1A0.241 (3)0.4908 (15)0.722 (3)0.025 (6)*
H1B0.321 (3)0.3969 (13)0.726 (3)0.029 (6)*
H20.582 (4)0.225 (2)0.093 (3)0.037 (7)*
H30.320 (3)0.3732 (15)0.035 (2)0.015 (5)*
H40.469 (3)0.4420 (15)0.103 (2)0.012 (4)*
H50.131 (4)0.5780 (19)0.011 (2)0.038 (7)*
H60.092 (3)0.6221 (13)0.461 (3)0.035 (5)*
H7−0.091 (2)0.6498 (18)0.474 (3)0.035 (5)*
U11U22U33U12U13U23
Co10.00514 (14)0.00495 (14)0.00451 (13)−0.00021 (8)−0.00063 (9)−0.00021 (8)
P10.00519 (16)0.00539 (17)0.00524 (15)0.00033 (12)−0.00009 (11)−0.00059 (11)
P20.00623 (17)0.00582 (17)0.00523 (17)0.00061 (12)−0.00118 (12)−0.00022 (11)
Na10.0087 (3)0.0113 (3)0.0102 (3)0.0003 (2)−0.0008 (2)0.0009 (2)
O10.0100 (5)0.0072 (5)0.0105 (4)0.0011 (4)0.0035 (4)0.0019 (4)
O20.0107 (5)0.0061 (5)0.0059 (4)0.0008 (4)−0.0019 (3)−0.0008 (3)
O30.0068 (5)0.0104 (5)0.0081 (4)0.0017 (4)−0.0002 (4)−0.0032 (4)
O40.0072 (5)0.0074 (5)0.0116 (4)−0.0008 (4)0.0001 (3)0.0000 (4)
O50.0121 (5)0.0067 (5)0.0084 (4)0.0001 (4)−0.0035 (4)0.0013 (4)
O60.0071 (4)0.0094 (5)0.0083 (4)−0.0004 (4)−0.0013 (3)−0.0002 (4)
O70.0080 (5)0.0098 (5)0.0064 (4)0.0021 (4)−0.0021 (3)−0.0015 (3)
O80.0091 (5)0.0141 (5)0.0109 (5)0.0018 (4)0.0006 (4)−0.0003 (4)
C10.0076 (6)0.0077 (6)0.0061 (6)0.0001 (5)0.0000 (5)0.0000 (5)
Co1—O12.0886 (10)Na1—O3iii2.3431 (12)
Co1—O1i2.0886 (10)Na1—O4iv2.3612 (11)
Co1—O72.0900 (10)Na1—O6iv2.4860 (12)
Co1—O72.0900 (10)Na1—O52.6243 (12)
Co1—O7i2.0900 (10)O1—H1A0.831 (16)
Co1—O22.1141 (10)O1—H1B0.830 (16)
Co1—O2i2.1141 (10)O3—Na1v2.3431 (12)
P1—O41.4975 (10)O3—H20.81 (3)
P1—O21.5198 (10)O4—Na1vi2.3612 (11)
P1—O31.5781 (10)O5—H50.815 (16)
P1—C11.8021 (14)O6—Na1vi2.4860 (12)
P2—O71.5083 (10)O8—Na1vii2.3149 (12)
P2—O71.5083 (10)O8—H60.856 (13)
P2—O61.5169 (10)O8—H70.834 (13)
P2—O51.5820 (10)C1—H30.92 (2)
P2—C11.7954 (14)C1—H40.92 (2)
Na1—O8ii2.3149 (12)
O1—Co1—O1i180O5—P2—C1107.49 (6)
O1—Co1—O786.63 (4)O8ii—Na1—O3iii115.88 (4)
O1i—Co1—O793.37 (4)O8ii—Na1—O4iv84.24 (4)
O1—Co1—O786.63 (4)O3iii—Na1—O4iv159.88 (4)
O1i—Co1—O793.37 (4)O8ii—Na1—O6iv83.04 (4)
O1—Co1—O7i93.37 (4)O3iii—Na1—O6iv92.19 (4)
O1i—Co1—O7i86.63 (4)O4iv—Na1—O6iv90.55 (4)
O7—Co1—O7i180O8ii—Na1—O590.31 (4)
O7—Co1—O7i180O3iii—Na1—O581.45 (4)
O1—Co1—O293.14 (4)O4iv—Na1—O599.03 (4)
O1i—Co1—O286.86 (4)O6iv—Na1—O5167.75 (4)
O7—Co1—O290.28 (4)Co1—O1—H1A119.7 (16)
O7—Co1—O290.28 (4)Co1—O1—H1B125.4 (16)
O7i—Co1—O289.73 (4)H1A—O1—H1B110 (2)
O1—Co1—O2i86.86 (4)P1—O2—Co1128.01 (6)
O1i—Co1—O2i93.14 (4)P1—O3—Na1v123.17 (6)
O7—Co1—O2i89.72 (4)P1—O3—H2114.8 (19)
O7—Co1—O2i89.72 (4)Na1v—O3—H2122.0 (19)
O7i—Co1—O2i90.27 (4)P1—O4—Na1vi130.61 (6)
O2—Co1—O2i180.00 (5)P2—O5—Na1120.44 (5)
O4—P1—O2115.31 (6)P2—O5—H5112.6 (18)
O4—P1—O3111.31 (6)Na1—O5—H5112.6 (18)
O2—P1—O3105.44 (6)P2—O6—Na1vi121.18 (5)
O4—P1—C1110.17 (6)P2—O7—Co1131.33 (6)
O2—P1—C1109.98 (6)Na1vii—O8—H6111.4 (16)
O3—P1—C1103.94 (6)Na1vii—O8—H7104.6 (17)
O7—P2—O6115.45 (6)H6—O8—H7102 (2)
O7—P2—O6115.45 (6)P2—C1—P1114.42 (7)
O7—P2—O5106.61 (6)P2—C1—H3112.4 (12)
O7—P2—O5106.61 (6)P1—C1—H3105.2 (12)
O6—P2—O5109.49 (6)P2—C1—H4110.3 (12)
O7—P2—C1108.36 (6)P1—C1—H4107.1 (12)
O7—P2—C1108.36 (6)H3—C1—H4107.0 (17)
O6—P2—C1109.14 (6)
O4—P1—O2—Co1−108.16 (8)O6iv—Na1—O5—P2140.99 (16)
O3—P1—O2—Co1128.63 (7)Na1ii—Na1—O5—P2−161.48 (7)
C1—P1—O2—Co117.13 (9)Na1vii—Na1—O5—P216.59 (7)
O1—Co1—O2—P1111.59 (7)O7—P2—O6—Na1vi−74.24 (8)
O1i—Co1—O2—P1−68.41 (7)O7—P2—O6—Na1vi−74.24 (8)
O7—Co1—O2—P124.95 (7)O5—P2—O6—Na1vi165.48 (5)
O7—Co1—O2—P124.95 (7)C1—P2—O6—Na1vi48.07 (7)
O7i—Co1—O2—P1−155.05 (7)O6—P2—O7—Co1134.82 (7)
O4—P1—O3—Na1v−126.78 (7)O5—P2—O7—Co1−103.34 (8)
O2—P1—O3—Na1v−1.06 (8)C1—P2—O7—Co112.09 (10)
C1—P1—O3—Na1v114.66 (7)O1—Co1—O7—P2−136.95 (8)
O2—P1—O4—Na1vi97.12 (8)O1i—Co1—O7—P243.05 (8)
O3—P1—O4—Na1vi−142.84 (7)O2—Co1—O7—P2−43.82 (8)
C1—P1—O4—Na1vi−28.09 (9)O2i—Co1—O7—P2136.18 (8)
O7—P2—O5—Na1−35.73 (8)O7—P2—C1—P146.92 (9)
O7—P2—O5—Na1−35.73 (8)O7—P2—C1—P146.92 (9)
O6—P2—O5—Na189.81 (7)O6—P2—C1—P1−79.55 (8)
C1—P2—O5—Na1−151.75 (6)O5—P2—C1—P1161.78 (7)
O8ii—Na1—O5—P2−162.13 (6)O4—P1—C1—P266.52 (9)
O3iii—Na1—O5—P281.72 (6)O2—P1—C1—P2−61.67 (9)
O4iv—Na1—O5—P2−77.92 (7)O3—P1—C1—P2−174.14 (7)
D—H···AD—HH···AD···AD—H···A
O8—H6···O70.86 (1)1.88 (1)2.7154 (15)164 (2)
C1—H4···O1i0.92 (2)2.54 (2)3.1449 (17)123.9 (15)
C1—H3···O4viii0.92 (2)2.53 (2)3.4366 (17)168.4 (17)
O3—H2···O2viii0.81 (3)1.84 (3)2.6394 (14)176 (3)
O1—H1A···O6ix0.83 (2)1.98 (2)2.8008 (14)173 (2)
O8—H7···O1ix0.83 (1)2.57 (2)3.2763 (15)143 (2)
O1—H1B···O4x0.83 (2)1.84 (2)2.6634 (15)175 (2)
O5—H5···O6xi0.82 (2)1.81 (2)2.6272 (14)177 (3)
Table 1

Selected bond lengths (Å)

Co1—O12.0886 (10)
Co1—O72.0900 (10)
Co1—O2i2.1141 (10)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O8—H6⋯O70.86 (1)1.88 (1)2.7154 (15)164 (2)
C1—H4⋯O1i0.92 (2)2.54 (2)3.1449 (17)123.9 (15)
C1—H3⋯O4ii0.92 (2)2.53 (2)3.4366 (17)168.4 (17)
O3—H2⋯O2ii0.81 (3)1.84 (3)2.6394 (14)176 (3)
O1—H1A⋯O6iii0.83 (2)1.98 (2)2.8008 (14)173 (2)
O8—H7⋯O1iii0.83 (1)2.57 (2)3.2763 (15)143 (2)
O1—H1B⋯O4iv0.83 (2)1.84 (2)2.6634 (15)175 (2)
O5—H5⋯O6v0.82 (2)1.81 (2)2.6272 (14)177 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  8 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Transformation from a low-dimensional framework to a high-dimensional architecture based on different metal ions: syntheses, structures, and photoluminescences.

Authors:  Yun Gong; Wang Tang; Wenbin Hou; Zhongyong Zha; Changwen Hu
Journal:  Inorg Chem       Date:  2006-06-26       Impact factor: 5.165

3.  Dipotassium diaqua-bis(methyl-enedi-phospho-nato-κO,O')cobaltate(II).

Authors:  H G Visser; J A Venter; K A Van der Merwe
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-16

4.  Diammonium diaqua-bis(methyl-enediphospho-nato-κO,O')cobaltate(II).

Authors:  K A Van der Merwe; Hendrik G Visser; J A Venter
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-17

5.  Sodium cobalt aminomethylidenediphosphonate with a novel open framework structure.

Authors:  Song-Song Bao; Li-Min Zheng; Yong-Jiang Liu; Wei Xu; Shouhua Feng
Journal:  Inorg Chem       Date:  2003-08-25       Impact factor: 5.165

6.  Layered cobalt(II) and nickel(II) diphosphonates showing canted antiferromagnetism and slow relaxation behavior.

Authors:  Deng-Ke Cao; Yi-Zhi Li; Li-Min Zheng
Journal:  Inorg Chem       Date:  2007-08-09       Impact factor: 5.165

7.  Bis(1-ammonio-ethane-1,1-diyl-diphos-phonato-κO,O')diaqua-cobalt(II) nona-hydrate.

Authors:  Vladimir V Bon; Anatolij V Dudko; Alexandra N Kozachkova; Vasily I Pekhnyo; Natalia V Tsaryk
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-17

8.  Pyridinium diaqua-bis-(methyl-enediphospho-nato-κO,O')chromate(III) tetra-hydrate.

Authors:  Kina Van der Merwe; Hendrik G Visser; J A Venter
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-24
  8 in total

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