| Literature DB >> 22058703 |
Zhiqiang Liang, Fuxiang Wang, Qihui Wu, Xia Zhi, Qinhe Pan.
Abstract
The title compound, [Co(C(6)H(6)N(4))(3)]HPO(4), was synthesized under hydro-thermal conditions. In the cation, the Co(II) atom is octa-hedrally coordinated by six N atoms from three 2,2'-bi-1H-imidazole ligands [Co-N bond lengths are in the range 2.084 (5)-2.133 (6) Å]. Inter-molecular N-H⋯O hydrogen bonds form an extensive hydrogen-bonding network, which links cations and anions into a three-dimensional crystal structure.Entities:
Year: 2011 PMID: 22058703 PMCID: PMC3201263 DOI: 10.1107/S1600536811037299
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C6H6N4)3]HPO4 | |
| Monoclinic, | Mo |
| Hall symbol: C -2yc | Cell parameters from 12761 reflections |
| θ = 3.1–27.5° | |
| µ = 0.81 mm−1 | |
| β = 95.84 (3)° | Block, blue |
| 0.2 × 0.17 × 0.15 mm | |
| Rigaku R-AXIS RAPID-S diffractometer | 5593 independent reflections |
| Radiation source: fine-focus sealed tube | 3373 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 12597 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.042 | |
| 5593 reflections | Δρmax = 0.40 e Å−3 |
| 325 parameters | Δρmin = −0.32 e Å−3 |
| 2 restraints | Absolute structure: Flack (1983), 2755 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.02 (2) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.61255 (7) | 0.33459 (3) | 0.15859 (9) | 0.0466 (3) | |
| P1 | 0.12445 (13) | 0.48617 (7) | 0.34051 (17) | 0.0397 (4) | |
| O1 | 0.1291 (4) | 0.5348 (2) | 0.4686 (5) | 0.0560 (13) | |
| H1 | 0.1900 | 0.5375 | 0.5077 | 0.067* | |
| O2 | 0.1932 (4) | 0.5113 (2) | 0.2233 (4) | 0.0512 (12) | |
| O3 | 0.0119 (4) | 0.4852 (3) | 0.2777 (6) | 0.0828 (17) | |
| O4 | 0.1658 (4) | 0.4249 (2) | 0.4011 (5) | 0.0699 (15) | |
| N1 | 0.4828 (5) | 0.3189 (3) | 0.2765 (7) | 0.0619 (18) | |
| N2 | 0.3328 (5) | 0.3553 (3) | 0.3473 (7) | 0.0648 (18) | |
| H2 | 0.2794 | 0.3792 | 0.3565 | 0.078* | |
| N3 | 0.5206 (5) | 0.4153 (2) | 0.0992 (6) | 0.0513 (14) | |
| N4 | 0.3842 (4) | 0.4723 (3) | 0.1484 (6) | 0.0566 (16) | |
| H4 | 0.3274 | 0.4838 | 0.1847 | 0.068* | |
| N5 | 0.7019 (4) | 0.3812 (2) | 0.3368 (6) | 0.0513 (15) | |
| N6 | 0.8457 (5) | 0.4352 (3) | 0.4042 (7) | 0.0584 (16) | |
| H6A | 0.9047 | 0.4544 | 0.3993 | 0.070* | |
| N7 | 0.7434 (4) | 0.3656 (3) | 0.0530 (6) | 0.0477 (14) | |
| N8 | 0.8950 (4) | 0.4176 (2) | 0.0763 (7) | 0.0482 (14) | |
| H8 | 0.9473 | 0.4395 | 0.1150 | 0.058* | |
| N9 | 0.6751 (5) | 0.2470 (3) | 0.2311 (8) | 0.0603 (17) | |
| N10 | 0.6751 (6) | 0.1449 (3) | 0.1916 (9) | 0.074 (2) | |
| H10 | 0.6636 | 0.1093 | 0.1498 | 0.089* | |
| N11 | 0.5563 (4) | 0.2775 (3) | −0.0218 (8) | 0.0625 (18) | |
| N12 | 0.5553 (5) | 0.1820 (3) | −0.1166 (9) | 0.077 (2) | |
| H12A | 0.5652 | 0.1426 | −0.1244 | 0.092* | |
| C1 | 0.4432 (7) | 0.2771 (4) | 0.3717 (12) | 0.095 (3) | |
| H1A | 0.4748 | 0.2395 | 0.4015 | 0.114* | |
| C2 | 0.3535 (7) | 0.2987 (4) | 0.4145 (12) | 0.097 (3) | |
| H2A | 0.3118 | 0.2790 | 0.4787 | 0.116* | |
| C3 | 0.4129 (5) | 0.3662 (3) | 0.2641 (8) | 0.0511 (18) | |
| C4 | 0.4347 (5) | 0.4180 (3) | 0.1736 (8) | 0.0449 (17) | |
| C5 | 0.4392 (7) | 0.5059 (4) | 0.0548 (10) | 0.078 (3) | |
| H5 | 0.4226 | 0.5454 | 0.0177 | 0.094* | |
| C6 | 0.5240 (6) | 0.4697 (3) | 0.0261 (9) | 0.063 (2) | |
| H6 | 0.5756 | 0.4811 | −0.0342 | 0.076* | |
| C7 | 0.7044 (7) | 0.3963 (3) | 0.4839 (9) | 0.064 (2) | |
| H7 | 0.6529 | 0.3853 | 0.5447 | 0.077* | |
| C8 | 0.7923 (8) | 0.4291 (4) | 0.5266 (9) | 0.071 (2) | |
| H8A | 0.8128 | 0.4446 | 0.6205 | 0.086* | |
| C9 | 0.7899 (5) | 0.4063 (3) | 0.2959 (8) | 0.0446 (16) | |
| C10 | 0.8109 (5) | 0.3975 (3) | 0.1443 (8) | 0.0415 (16) | |
| C11 | 0.8805 (6) | 0.3960 (3) | −0.0667 (8) | 0.0520 (17) | |
| H11 | 0.9254 | 0.4018 | −0.1400 | 0.062* | |
| C12 | 0.7866 (6) | 0.3645 (3) | −0.0789 (8) | 0.0562 (19) | |
| H12 | 0.7563 | 0.3452 | −0.1643 | 0.067* | |
| C13 | 0.7277 (7) | 0.2186 (4) | 0.3508 (9) | 0.070 (2) | |
| H13 | 0.7583 | 0.2388 | 0.4348 | 0.083* | |
| C14 | 0.7284 (8) | 0.1565 (4) | 0.3283 (12) | 0.078 (3) | |
| H14 | 0.7593 | 0.1268 | 0.3933 | 0.094* | |
| C15 | 0.6450 (5) | 0.2012 (3) | 0.1372 (9) | 0.057 (2) | |
| C16 | 0.5860 (6) | 0.2179 (3) | 0.0014 (10) | 0.061 (2) | |
| C17 | 0.5049 (8) | 0.2208 (5) | −0.2230 (12) | 0.094 (3) | |
| H17 | 0.4756 | 0.2088 | −0.3164 | 0.113* | |
| C18 | 0.5058 (7) | 0.2797 (4) | −0.1671 (12) | 0.086 (3) | |
| H18 | 0.4781 | 0.3151 | −0.2158 | 0.103* |
| Co1 | 0.0401 (4) | 0.0300 (4) | 0.0746 (6) | −0.0043 (5) | 0.0292 (4) | −0.0064 (5) |
| P1 | 0.0473 (10) | 0.0415 (9) | 0.0323 (8) | −0.0023 (8) | 0.0134 (8) | −0.0013 (8) |
| O1 | 0.075 (4) | 0.048 (3) | 0.046 (3) | 0.005 (3) | 0.012 (3) | −0.004 (2) |
| O2 | 0.057 (3) | 0.051 (3) | 0.048 (3) | −0.002 (2) | 0.014 (2) | 0.009 (2) |
| O3 | 0.058 (3) | 0.100 (4) | 0.091 (4) | −0.007 (3) | 0.011 (3) | −0.023 (3) |
| O4 | 0.104 (4) | 0.042 (3) | 0.068 (3) | 0.020 (3) | 0.028 (3) | 0.011 (2) |
| N1 | 0.053 (4) | 0.043 (3) | 0.098 (5) | −0.005 (3) | 0.047 (4) | 0.000 (3) |
| N2 | 0.055 (4) | 0.047 (3) | 0.100 (5) | −0.002 (3) | 0.043 (4) | −0.002 (4) |
| N3 | 0.049 (3) | 0.045 (3) | 0.063 (4) | 0.004 (3) | 0.020 (3) | 0.001 (3) |
| N4 | 0.047 (4) | 0.060 (4) | 0.064 (4) | 0.018 (3) | 0.013 (3) | 0.009 (3) |
| N5 | 0.055 (4) | 0.038 (3) | 0.065 (4) | −0.004 (3) | 0.026 (3) | −0.007 (3) |
| N6 | 0.059 (4) | 0.054 (4) | 0.064 (4) | −0.014 (3) | 0.016 (4) | −0.006 (3) |
| N7 | 0.040 (3) | 0.048 (3) | 0.057 (4) | −0.006 (3) | 0.016 (3) | −0.004 (3) |
| N8 | 0.036 (3) | 0.044 (3) | 0.066 (4) | −0.005 (2) | 0.016 (3) | 0.005 (3) |
| N9 | 0.057 (4) | 0.046 (4) | 0.084 (5) | 0.002 (3) | 0.038 (4) | −0.004 (4) |
| N10 | 0.079 (5) | 0.034 (3) | 0.115 (6) | −0.005 (3) | 0.036 (5) | −0.005 (4) |
| N11 | 0.040 (3) | 0.040 (4) | 0.112 (6) | −0.001 (3) | 0.026 (4) | −0.015 (4) |
| N12 | 0.063 (4) | 0.038 (3) | 0.129 (6) | −0.006 (3) | 0.012 (4) | −0.022 (4) |
| C1 | 0.076 (6) | 0.051 (5) | 0.171 (9) | 0.006 (4) | 0.075 (7) | 0.029 (6) |
| C2 | 0.084 (6) | 0.053 (5) | 0.167 (10) | 0.006 (5) | 0.082 (7) | 0.029 (6) |
| C3 | 0.053 (4) | 0.035 (4) | 0.070 (5) | −0.008 (3) | 0.028 (4) | −0.011 (4) |
| C4 | 0.030 (4) | 0.046 (4) | 0.060 (5) | 0.002 (3) | 0.013 (3) | −0.007 (3) |
| C5 | 0.086 (6) | 0.070 (6) | 0.084 (6) | 0.015 (5) | 0.037 (6) | 0.031 (5) |
| C6 | 0.060 (5) | 0.058 (5) | 0.077 (5) | 0.006 (4) | 0.033 (4) | 0.022 (4) |
| C7 | 0.079 (6) | 0.056 (5) | 0.062 (5) | −0.003 (4) | 0.031 (5) | −0.009 (4) |
| C8 | 0.089 (6) | 0.069 (6) | 0.060 (5) | −0.010 (5) | 0.025 (5) | −0.010 (4) |
| C9 | 0.037 (4) | 0.038 (4) | 0.060 (5) | −0.001 (3) | 0.014 (4) | 0.006 (3) |
| C10 | 0.043 (4) | 0.032 (3) | 0.052 (4) | −0.002 (3) | 0.019 (4) | 0.002 (3) |
| C11 | 0.043 (4) | 0.063 (5) | 0.052 (4) | −0.009 (4) | 0.016 (4) | 0.000 (4) |
| C12 | 0.061 (5) | 0.055 (5) | 0.053 (5) | −0.007 (4) | 0.009 (4) | −0.007 (4) |
| C13 | 0.080 (6) | 0.058 (5) | 0.074 (6) | −0.006 (4) | 0.023 (5) | 0.004 (4) |
| C14 | 0.090 (7) | 0.042 (5) | 0.107 (8) | 0.007 (4) | 0.029 (6) | 0.005 (5) |
| C15 | 0.046 (4) | 0.035 (4) | 0.094 (6) | −0.003 (3) | 0.027 (4) | −0.002 (4) |
| C16 | 0.041 (4) | 0.035 (4) | 0.111 (7) | −0.005 (3) | 0.031 (5) | −0.009 (5) |
| C17 | 0.081 (7) | 0.064 (6) | 0.134 (9) | −0.013 (5) | −0.007 (6) | −0.029 (6) |
| C18 | 0.059 (6) | 0.079 (7) | 0.116 (8) | −0.001 (5) | −0.006 (6) | 0.003 (6) |
| Co1—N1 | 2.084 (5) | N9—C15 | 1.332 (9) |
| Co1—N7 | 2.110 (5) | N9—C13 | 1.364 (10) |
| Co1—N11 | 2.115 (7) | N10—C15 | 1.346 (9) |
| Co1—N9 | 2.120 (6) | N10—C14 | 1.379 (11) |
| Co1—N3 | 2.127 (6) | N10—H10 | 0.8600 |
| Co1—N5 | 2.133 (6) | N11—C16 | 1.344 (9) |
| P1—O3 | 1.485 (6) | N11—C18 | 1.412 (11) |
| P1—O4 | 1.500 (4) | N12—C16 | 1.348 (10) |
| P1—O2 | 1.544 (4) | N12—C17 | 1.384 (11) |
| P1—O1 | 1.563 (5) | N12—H12A | 0.8600 |
| O1—H1 | 0.8200 | C1—C2 | 1.325 (10) |
| N1—C3 | 1.344 (9) | C1—H1A | 0.9300 |
| N1—C1 | 1.378 (9) | C2—H2A | 0.9300 |
| N2—C3 | 1.350 (8) | C3—C4 | 1.429 (9) |
| N2—C2 | 1.373 (9) | C5—C6 | 1.373 (10) |
| N2—H2 | 0.8600 | C5—H5 | 0.9300 |
| N3—C4 | 1.343 (8) | C6—H6 | 0.9300 |
| N3—C6 | 1.347 (8) | C7—C8 | 1.343 (11) |
| N4—C4 | 1.337 (8) | C7—H7 | 0.9300 |
| N4—C5 | 1.363 (9) | C8—H8A | 0.9300 |
| N4—H4 | 0.8600 | C9—C10 | 1.446 (9) |
| N5—C9 | 1.327 (8) | C11—C12 | 1.365 (9) |
| N5—C7 | 1.376 (8) | C11—H11 | 0.9300 |
| N6—C9 | 1.311 (8) | C12—H12 | 0.9300 |
| N6—C8 | 1.370 (9) | C13—C14 | 1.347 (10) |
| N6—H6A | 0.8600 | C13—H13 | 0.9300 |
| N7—C10 | 1.323 (8) | C14—H14 | 0.9300 |
| N7—C12 | 1.372 (8) | C15—C16 | 1.426 (11) |
| N8—C10 | 1.358 (8) | C17—C18 | 1.361 (11) |
| N8—C11 | 1.377 (9) | C17—H17 | 0.9300 |
| N8—H8 | 0.8600 | C18—H18 | 0.9300 |
| N1—Co1—N7 | 170.6 (2) | C16—N12—H12A | 126.5 |
| N1—Co1—N11 | 94.9 (2) | C17—N12—H12A | 126.5 |
| N7—Co1—N11 | 92.7 (2) | C2—C1—N1 | 109.8 (7) |
| N1—Co1—N9 | 89.3 (2) | C2—C1—H1A | 125.1 |
| N7—Co1—N9 | 97.7 (2) | N1—C1—H1A | 125.1 |
| N11—Co1—N9 | 79.4 (3) | C1—C2—N2 | 108.0 (7) |
| N1—Co1—N3 | 79.6 (2) | C1—C2—H2A | 126.0 |
| N7—Co1—N3 | 93.7 (2) | N2—C2—H2A | 126.0 |
| N11—Co1—N3 | 98.0 (2) | N1—C3—N2 | 110.6 (6) |
| N9—Co1—N3 | 168.4 (2) | N1—C3—C4 | 118.0 (6) |
| N1—Co1—N5 | 94.0 (2) | N2—C3—C4 | 131.3 (7) |
| N7—Co1—N5 | 79.5 (2) | N4—C4—N3 | 110.6 (6) |
| N11—Co1—N5 | 167.1 (2) | N4—C4—C3 | 131.2 (6) |
| N9—Co1—N5 | 91.4 (2) | N3—C4—C3 | 118.2 (6) |
| N3—Co1—N5 | 92.8 (2) | N4—C5—C6 | 106.4 (6) |
| O3—P1—O4 | 114.6 (4) | N4—C5—H5 | 126.8 |
| O3—P1—O2 | 109.2 (3) | C6—C5—H5 | 126.8 |
| O4—P1—O2 | 111.0 (3) | N3—C6—C5 | 109.3 (6) |
| O3—P1—O1 | 105.1 (3) | N3—C6—H6 | 125.4 |
| O4—P1—O1 | 109.0 (3) | C5—C6—H6 | 125.4 |
| O2—P1—O1 | 107.6 (3) | C8—C7—N5 | 110.0 (7) |
| P1—O1—H1 | 109.5 | C8—C7—H7 | 125.0 |
| C3—N1—C1 | 105.3 (6) | N5—C7—H7 | 125.0 |
| C3—N1—Co1 | 112.7 (5) | C7—C8—N6 | 106.3 (7) |
| C1—N1—Co1 | 142.0 (5) | C7—C8—H8A | 126.9 |
| C3—N2—C2 | 106.4 (6) | N6—C8—H8A | 126.9 |
| C3—N2—H2 | 126.8 | N6—C9—N5 | 112.7 (6) |
| C2—N2—H2 | 126.8 | N6—C9—C10 | 130.0 (6) |
| C4—N3—C6 | 106.3 (6) | N5—C9—C10 | 117.3 (6) |
| C4—N3—Co1 | 111.1 (4) | N7—C10—N8 | 111.5 (6) |
| C6—N3—Co1 | 141.9 (5) | N7—C10—C9 | 119.8 (6) |
| C4—N4—C5 | 107.4 (6) | N8—C10—C9 | 128.7 (7) |
| C4—N4—H4 | 126.3 | C12—C11—N8 | 106.0 (6) |
| C5—N4—H4 | 126.3 | C12—C11—H11 | 127.0 |
| C9—N5—C7 | 104.0 (6) | N8—C11—H11 | 127.0 |
| C9—N5—Co1 | 112.0 (5) | C11—C12—N7 | 110.2 (6) |
| C7—N5—Co1 | 144.1 (5) | C11—C12—H12 | 124.9 |
| C9—N6—C8 | 107.0 (6) | N7—C12—H12 | 124.9 |
| C9—N6—H6A | 126.5 | C14—C13—N9 | 109.3 (8) |
| C8—N6—H6A | 126.5 | C14—C13—H13 | 125.4 |
| C10—N7—C12 | 105.5 (5) | N9—C13—H13 | 125.4 |
| C10—N7—Co1 | 111.5 (4) | C13—C14—N10 | 107.8 (8) |
| C12—N7—Co1 | 143.0 (5) | C13—C14—H14 | 126.1 |
| C10—N8—C11 | 106.8 (6) | N10—C14—H14 | 126.1 |
| C10—N8—H8 | 126.6 | N9—C15—N10 | 111.8 (8) |
| C11—N8—H8 | 126.6 | N9—C15—C16 | 117.7 (7) |
| C15—N9—C13 | 105.7 (6) | N10—C15—C16 | 130.5 (7) |
| C15—N9—Co1 | 112.2 (6) | N11—C16—N12 | 111.3 (8) |
| C13—N9—Co1 | 141.6 (6) | N11—C16—C15 | 119.3 (7) |
| C15—N10—C14 | 105.5 (7) | N12—C16—C15 | 129.3 (7) |
| C15—N10—H10 | 127.3 | C18—C17—N12 | 108.0 (9) |
| C14—N10—H10 | 127.3 | C18—C17—H17 | 126.0 |
| C16—N11—C18 | 105.8 (7) | N12—C17—H17 | 126.0 |
| C16—N11—Co1 | 111.2 (6) | C17—C18—N11 | 107.9 (8) |
| C18—N11—Co1 | 142.7 (6) | C17—C18—H18 | 126.1 |
| C16—N12—C17 | 107.0 (7) | N11—C18—H18 | 126.1 |
| H··· | ||||
| N2—H2···O4 | 0.86 | 1.82 | 2.678 (7) | 172.1 |
| N4—H4···O2 | 0.86 | 1.87 | 2.717 (7) | 168.3 |
| N6—H6A···O3i | 0.86 | 1.96 | 2.725 (8) | 148.3 |
| N8—H8···O3i | 0.86 | 1.89 | 2.669 (8) | 149.3 |
| N10—H10···O2ii | 0.86 | 2.23 | 2.887 (7) | 133.7 |
| N10—H10···O4iii | 0.86 | 2.39 | 3.034 (9) | 132.5 |
| N12—H12A···O4iii | 0.86 | 1.93 | 2.685 (8) | 146.0 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O4 | 0.86 | 1.82 | 2.678 (7) | 172.1 |
| N4—H4⋯O2 | 0.86 | 1.87 | 2.717 (7) | 168.3 |
| N6—H6 | 0.86 | 1.96 | 2.725 (8) | 148.3 |
| N8—H8⋯O3i | 0.86 | 1.89 | 2.669 (8) | 149.3 |
| N10—H10⋯O2ii | 0.86 | 2.23 | 2.887 (7) | 133.7 |
| N10—H10⋯O4iii | 0.86 | 2.39 | 3.034 (9) | 132.5 |
| N12—H12 | 0.86 | 1.93 | 2.685 (8) | 146.0 |
Symmetry codes: (i) ; (ii) ; (iii) .