Literature DB >> 22058146

A combined array-based comparative genomic hybridization and functional library screening approach identifies mir-30d as an oncomir in cancer.

Ning Li1, Sippy Kaur, Joel Greshock, Heini Lassus, Xiaomin Zhong, Yanling Wang, Arto Leminen, Zhongjun Shao, Xiaowen Hu, Shun Liang, Dionyssios Katsaros, Qihong Huang, Ralf Bützow, Barbara L Weber, George Coukos, Lin Zhang.   

Abstract

Oncomirs are microRNAs (miRNA) that acts as oncogenes or tumor suppressor genes. Efficient identification of oncomirs remains a challenge. Here we report a novel, clinically guided genetic screening approach for the identification of oncomirs, identifying mir-30d through this strategy. mir-30d regulates tumor cell proliferation, apoptosis, senescence, and migration. The chromosomal locus harboring mir-30d was amplified in more than 30% of multiple types of human solid tumors (n = 1,283). Importantly, higher levels of mir-30d expression were associated significantly with poor clinical outcomes in ovarian cancer patients (n = 330, P = 0.0016). Mechanistic investigations suggested that mir-30d regulates a large number of cancer-associated genes, including the apoptotic caspase CASP3. The guided genetic screening approach validated by this study offers a powerful tool to identify oncomirs that may have utility as biomarkers or targets for drug development. ©2011 AACR.

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Year:  2011        PMID: 22058146      PMCID: PMC4101815          DOI: 10.1158/0008-5472.CAN-11-2484

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  50 in total

1.  Identification of novel genes coding for small expressed RNAs.

Authors:  M Lagos-Quintana; R Rauhut; W Lendeckel; T Tuschl
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

2.  Simian virus 40-transformed human ovarian surface epithelial cells escape normal growth controls but retain morphogenetic responses to extracellular matrix.

Authors:  S L Maines-Bandiera; P A Kruk; N Auersperg
Journal:  Am J Obstet Gynecol       Date:  1992-09       Impact factor: 8.661

3.  Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.

Authors:  Benjamin P Lewis; Christopher B Burge; David P Bartel
Journal:  Cell       Date:  2005-01-14       Impact factor: 41.582

4.  RAS is regulated by the let-7 microRNA family.

Authors:  Steven M Johnson; Helge Grosshans; Jaclyn Shingara; Mike Byrom; Rich Jarvis; Angie Cheng; Emmanuel Labourier; Kristy L Reinert; David Brown; Frank J Slack
Journal:  Cell       Date:  2005-03-11       Impact factor: 41.582

5.  Frequent deletions and down-regulation of micro- RNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia.

Authors:  George Adrian Calin; Calin Dan Dumitru; Masayoshi Shimizu; Roberta Bichi; Simona Zupo; Evan Noch; Hansjuerg Aldler; Sashi Rattan; Michael Keating; Kanti Rai; Laura Rassenti; Thomas Kipps; Massimo Negrini; Florencia Bullrich; Carlo M Croce
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-14       Impact factor: 11.205

6.  Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs.

Authors:  Lee P Lim; Nelson C Lau; Philip Garrett-Engele; Andrew Grimson; Janell M Schelter; John Castle; David P Bartel; Peter S Linsley; Jason M Johnson
Journal:  Nature       Date:  2005-01-30       Impact factor: 49.962

Review 7.  MicroRNAs and cancer.

Authors:  Michael T McManus
Journal:  Semin Cancer Biol       Date:  2003-08       Impact factor: 15.707

8.  Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans.

Authors:  B Wightman; I Ha; G Ruvkun
Journal:  Cell       Date:  1993-12-03       Impact factor: 41.582

9.  The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14.

Authors:  R C Lee; R L Feinbaum; V Ambros
Journal:  Cell       Date:  1993-12-03       Impact factor: 41.582

10.  Amplification and overexpression of Hsa-miR-30b, Hsa-miR-30d and KHDRBS3 at 8q24.22-q24.23 in medulloblastoma.

Authors:  Yuan Lu; Sarra L Ryan; David J Elliott; Graham R Bignell; P Andrew Futreal; David W Ellison; Simon Bailey; Steven C Clifford
Journal:  PLoS One       Date:  2009-07-07       Impact factor: 3.240

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  28 in total

1.  mir-30d Regulates multiple genes in the autophagy pathway and impairs autophagy process in human cancer cells.

Authors:  Xiaojun Yang; Xiaomin Zhong; Janos L Tanyi; Jianfeng Shen; Congjian Xu; Peng Gao; Tim M Zheng; Angela DeMichele; Lin Zhang
Journal:  Biochem Biophys Res Commun       Date:  2012-12-27       Impact factor: 3.575

2.  Role of microRNA 30a targeting insulin receptor substrate 2 in colorectal tumorigenesis.

Authors:  Qian Zhang; Qingchao Tang; Dandan Qin; Lei Yu; Rui Huang; Guixiang Lv; Zhaoxia Zou; Xiao-chen Jiang; Chendan Zou; Wei Liu; Jing Luo; Zhixun Zhao; Shan Muhammad; Guiyu Wang; Ying-gang Chen; Xishan Wang
Journal:  Mol Cell Biol       Date:  2015-01-12       Impact factor: 4.272

Review 3.  MicroRNAs in the p53 network: micromanagement of tumour suppression.

Authors:  Heiko Hermeking
Journal:  Nat Rev Cancer       Date:  2012-08-17       Impact factor: 60.716

4.  MicroRNA-30c targets cytoskeleton genes involved in breast cancer cell invasion.

Authors:  Jessica Bockhorn; Kathy Yee; Ya-Fang Chang; Aleix Prat; Dezheng Huo; Chika Nwachukwu; Rachel Dalton; Simo Huang; Kaitlin E Swanson; Charles M Perou; Olufunmilayo I Olopade; Michael F Clarke; Geoffrey L Greene; Huiping Liu
Journal:  Breast Cancer Res Treat       Date:  2012-12-07       Impact factor: 4.872

5.  Mir-30d increases intracellular survival of Helicobacter pylori through inhibition of autophagy pathway.

Authors:  Xiao-Jun Yang; Ruo-Huang Si; Yu-He Liang; Bing-Qiang Ma; Ze-Bin Jiang; Bin Wang; Peng Gao
Journal:  World J Gastroenterol       Date:  2016-04-21       Impact factor: 5.742

6.  Down-regulation of RE-1 silencing transcription factor (REST) in advanced prostate cancer by hypoxia-induced miR-106b~25.

Authors:  Hongzi Liang; Leo Studach; Ronald L Hullinger; Jun Xie; Ourania M Andrisani
Journal:  Exp Cell Res       Date:  2013-10-14       Impact factor: 3.905

Review 7.  The Diagnostic and Prognostic Potential of microRNAs in Epithelial Ovarian Carcinoma.

Authors:  Priya Samuel; David Raul Francisco Carter
Journal:  Mol Diagn Ther       Date:  2017-02       Impact factor: 4.074

8.  Urinary microRNA-10a and microRNA-30d serve as novel, sensitive and specific biomarkers for kidney injury.

Authors:  Nan Wang; Yang Zhou; Lei Jiang; Donghai Li; Junwei Yang; Chen-Yu Zhang; Ke Zen
Journal:  PLoS One       Date:  2012-12-13       Impact factor: 3.240

9.  Identification of miR-30d as a novel prognostic maker of prostate cancer.

Authors:  Naohito Kobayashi; Hiroji Uemura; Kiyotaka Nagahama; Koji Okudela; Mitsuko Furuya; Yoko Ino; Yusuke Ito; Hisashi Hirano; Yoshiaki Inayama; Ichiro Aoki; Yoji Nagashima; Yoshinobu Kubota; Hitoshi Ishiguro
Journal:  Oncotarget       Date:  2012-11

10.  Characterization of miRNomes in acute and chronic myeloid leukemia cell lines.

Authors:  Qian Xiong; Yadong Yang; Hai Wang; Jie Li; Shaobin Wang; Yanming Li; Yaran Yang; Kan Cai; Xiuyan Ruan; Jiangwei Yan; Songnian Hu; Xiangdong Fang
Journal:  Genomics Proteomics Bioinformatics       Date:  2014-04-19       Impact factor: 7.691

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