Literature DB >> 22057991

Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals.

I A Arif1, H A Khan, M Al Sadoon, M Shobrak.   

Abstract

In recent years, DNA barcoding has emerged as a powerful tool for species identification. We report an extended validation of a universal DNA mini-barcode for amplification of 130-bp COI segments from 23 specimens collected from a desert environment, including 11 reptiles, five mammals and seven birds. Besides the standard double-annealing protocol, we also tested a more stringent single-annealing protocol. The PCR success rate for the amplification of the mini-barcode region was: mammals (4/5), reptiles (5/11) and birds (4/7). These findings demonstrate the limited utility of universal primers for mini-barcoding, at least for these vertebrate taxa that we collected from the Saudi Arabian desert.

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Year:  2011        PMID: 22057991     DOI: 10.4238/2011.October.31.3

Source DB:  PubMed          Journal:  Genet Mol Res        ISSN: 1676-5680


  8 in total

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  8 in total

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