Literature DB >> 22057934

Bacterial expression, purification and characterization of a rice voltage-dependent, anion-selective channel isoform, OsVDAC4.

Ashwini Godbole1, Rohan Mitra, Ashvini K Dubey, Palakolanu S Reddy, M K Mathew.   

Abstract

The voltage-dependent anion-selective channel (VDAC) is the most abundant protein in the mitochondrial outer membrane and forms the major conduit for metabolite transport across this membrane. VDACs from different sources show varied primary sequence but conserved functional properties. Here, we report on the characterization of a rice channel, OsVDAC4, which complements a VDAC1 deficiency in yeast. We present a consensus secondary structure prediction of an N-terminal α-helix and 19 β-strands. Bacterially expressed OsVDAC4 was purified from inclusion bodies into detergent-containing solution, where it is largely helical. Detergent-solubilized OsVDAC4 inserts spontaneously into artificial membranes of two topologies-spherical liposomes and planar bilayers. Insertion into liposomes results in an increase in β-structure. Transport of polyethylene glycols was used to estimate a pore diameter of ~2.6 nm in liposomes. Channels formed in planar bilayers exhibit large conductance (4.6 ± 0.3 nS in 1 M KCl), strong voltage dependence and weak anion selectivity. The open state of the channel is shown to be permeable to ATP. These data are consistent with a large β-barrel pore formed by OsVDAC4 on inserting into membranes. This study forms a platform to carry out studies of the interaction of OsVDAC4 with putative modulators.

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Year:  2011        PMID: 22057934     DOI: 10.1007/s00232-011-9399-x

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  46 in total

1.  A network of rice genes associated with stress response and seed development.

Authors:  Bret Cooper; Joseph D Clarke; Paul Budworth; Joel Kreps; Don Hutchison; Sylvia Park; Sonia Guimil; Molly Dunn; Peter Luginbühl; Cinzia Ellero; Stephen A Goff; Jane Glazebrook
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-08       Impact factor: 11.205

2.  Filtration, diffusion, and molecular sieving through porous cellulose membranes.

Authors:  E M RENKIN
Journal:  J Gen Physiol       Date:  1954-11-20       Impact factor: 4.086

3.  Voltage gating of the mitochondrial outer membrane channel VDAC is regulated by a very conserved protein.

Authors:  M Y Liu; M Colombini
Journal:  Am J Physiol       Date:  1991-02

4.  The voltage-dependent anion channel, a major component of the tRNA import machinery in plant mitochondria.

Authors:  Thalia Salinas; Anne-Marie Duchêne; Ludovic Delage; Stefan Nilsson; Elzbieta Glaser; Marlyse Zaepfel; Laurence Maréchal-Drouard
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-14       Impact factor: 11.205

5.  VDAC is a conserved element of death pathways in plant and animal systems.

Authors:  A Godbole; J Varghese; A Sarin; M K Mathew
Journal:  Biochim Biophys Acta       Date:  2003-09-23

6.  ATP flux is controlled by a voltage-gated channel from the mitochondrial outer membrane.

Authors:  T Rostovtseva; M Colombini
Journal:  J Biol Chem       Date:  1996-11-08       Impact factor: 5.157

7.  Bacterial expression and characterization of the mitochondrial outer membrane channel. Effects of n-terminal modifications.

Authors:  D A Koppel; K W Kinnally; P Masters; M Forte; E Blachly-Dyson; C A Mannella
Journal:  J Biol Chem       Date:  1998-05-29       Impact factor: 5.157

8.  Biochemical, molecular, and functional characterization of porin isoforms from potato mitochondria.

Authors:  L Heins; H Mentzel; A Schmid; R Benz; U K Schmitz
Journal:  J Biol Chem       Date:  1994-10-21       Impact factor: 5.157

9.  Structure and mode of action of a voltage dependent anion-selective channel (VDAC) located in the outer mitochondrial membrane.

Authors:  M Colombini
Journal:  Ann N Y Acad Sci       Date:  1980       Impact factor: 5.691

10.  Probing the orientation of yeast VDAC1 in vivo.

Authors:  Beth M McDonald; Mateusz M Wydro; Robert N Lightowlers; Jeremy H Lakey
Journal:  FEBS Lett       Date:  2009-01-29       Impact factor: 4.124

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  4 in total

1.  Mitochondrial VDAC and hexokinase together modulate plant programmed cell death.

Authors:  Ashwini Godbole; Ashvini Kumar Dubey; Palakolanu S Reddy; M Udayakumar; Mathew K Mathew
Journal:  Protoplasma       Date:  2012-12-18       Impact factor: 3.356

2.  Molecular identification and interaction assay of the gene (OsUbc13) encoding a ubiquitin-conjugating enzyme in rice.

Authors:  Ya Wang; Meng-yun Xu; Jian-ping Liu; Mu-gui Wang; Hai-qing Yin; Ju-min Tu
Journal:  J Zhejiang Univ Sci B       Date:  2014-07       Impact factor: 3.066

3.  The interaction between AtMT2b and AtVDAC3 affects the mitochondrial membrane potential and reactive oxygen species generation under NaCl stress in Arabidopsis.

Authors:  Min Zhang; Shenkui Liu; Tetsuo Takano; Xinxin Zhang
Journal:  Planta       Date:  2018-09-17       Impact factor: 4.116

Review 4.  Calcium Flux across Plant Mitochondrial Membranes: Possible Molecular Players.

Authors:  Luca Carraretto; Vanessa Checchetto; Sara De Bortoli; Elide Formentin; Alex Costa; Ildikó Szabó; Enrico Teardo
Journal:  Front Plant Sci       Date:  2016-03-31       Impact factor: 5.753

  4 in total

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