Literature DB >> 22052904

Solution structure and molecular interactions of lamin B receptor Tudor domain.

Stamatis Liokatis1, Christian Edlich, Katerina Soupsana, Ioannis Giannios, Parthena Panagiotidou, Konstantinos Tripsianes, Michael Sattler, Spyros D Georgatos, Anastasia S Politou.   

Abstract

Lamin B receptor (LBR) is a polytopic protein of the nuclear envelope thought to connect the inner nuclear membrane with the underlying nuclear lamina and peripheral heterochromatin. To better understand the function of this protein, we have examined in detail its nucleoplasmic region, which is predicted to harbor a Tudor domain (LBR-TD). Structural analysis by multidimensional NMR spectroscopy establishes that LBR-TD indeed adopts a classical β-barrel Tudor fold in solution, which, however, features an incomplete aromatic cage. Removal of LBR-TD renders LBR more mobile at the plane of the nuclear envelope, but the isolated module does not bind to nuclear lamins, heterochromatin proteins (MeCP2), and nucleosomes, nor does it associate with methylated Arg/Lys residues through its aromatic cage. Instead, LBR-TD exhibits tight and stoichiometric binding to the "histone-fold" region of unassembled, free histone H3, suggesting an interesting role in histone assembly. Consistent with such a role, robust binding to native nucleosomes is observed when LBR-TD is extended toward its carboxyl terminus, to include an area rich in Ser-Arg residues. The Ser-Arg region, alone or in combination with LBR-TD, binds both unassembled and assembled H3/H4 histones, suggesting that the TD/RS interface may operate as a "histone chaperone-like platform."

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Year:  2011        PMID: 22052904      PMCID: PMC3256899          DOI: 10.1074/jbc.M111.281303

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  57 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-19       Impact factor: 11.205

3.  Tudor, MBT and chromo domains gauge the degree of lysine methylation.

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4.  The structure of nucleosome assembly protein 1.

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Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

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6.  Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9.

Authors:  Peter R Nielsen; Daniel Nietlispach; Helen R Mott; Juliana Callaghan; Andrew Bannister; Tony Kouzarides; Alexey G Murzin; Natalia V Murzina; Ernest D Laue
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Authors:  G Cornilescu; F Delaglio; A Bax
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8.  Tudor domains bind symmetrical dimethylated arginines.

Authors:  Jocelyn Côté; Stéphane Richard
Journal:  J Biol Chem       Date:  2005-06-06       Impact factor: 5.157

9.  Characterization of a gene encoding survival motor neuron (SMN)-related protein, a constituent of the spliceosome complex.

Authors:  K Talbot; I Miguel-Aliaga; P Mohaghegh; C P Ponting; K E Davies
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10.  The structure of the N-terminal domain of the fragile X mental retardation protein: a platform for protein-protein interaction.

Authors:  Andres Ramos; David Hollingworth; Salvatore Adinolfi; Marie Castets; Geoff Kelly; Thomas A Frenkiel; Barbara Bardoni; Annalisa Pastore
Journal:  Structure       Date:  2006-01       Impact factor: 5.006

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  10 in total

1.  ELCS in ice: cryo-electron microscopy of nuclear envelope-limited chromatin sheets.

Authors:  Mikhail Eltsov; Sergey Sosnovski; Ada L Olins; Donald E Olins
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2.  Twin enzymes, divergent control: The cholesterogenic enzymes DHCR14 and LBR are differentially regulated transcriptionally and post-translationally.

Authors:  Isabelle M Capell-Hattam; Laura J Sharpe; Lydia Qian; Gene Hart-Smith; Anika V Prabhu; Andrew J Brown
Journal:  J Biol Chem       Date:  2020-01-07       Impact factor: 5.157

3.  Characterization of lamin B receptor of Sf9 cells and its fate during Autographa californica nucleopolyhedrovirus infection.

Authors:  Wenqiang Wei; Zichao Hu; Yuting Jia; TingXuan Gu; Wei Zhao; Shaoping Ji
Journal:  Cytotechnology       Date:  2020-04-03       Impact factor: 2.058

4.  Lamin B receptor recognizes specific modifications of histone H4 in heterochromatin formation.

Authors:  Yasuhiro Hirano; Kohji Hizume; Hiroshi Kimura; Kunio Takeyasu; Tokuko Haraguchi; Yasushi Hiraoka
Journal:  J Biol Chem       Date:  2012-10-25       Impact factor: 5.157

Review 5.  Tudor: a versatile family of histone methylation 'readers'.

Authors:  Rui Lu; Gang Greg Wang
Journal:  Trends Biochem Sci       Date:  2013-09-10       Impact factor: 13.807

6.  Knock-down of methyl CpG-binding protein 2 (MeCP2) causes alterations in cell proliferation and nuclear lamins expression in mammalian cells.

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Journal:  BMC Cell Biol       Date:  2012-07-11       Impact factor: 4.241

7.  ELYS regulates the localization of LBR by modulating its phosphorylation state.

Authors:  Yasuhiro Mimura; Masatoshi Takagi; Michaela Clever; Naoko Imamoto
Journal:  J Cell Sci       Date:  2016-10-06       Impact factor: 5.285

8.  Dynamics and Structure-Function Relationships of the Lamin B Receptor (LBR).

Authors:  Ioannis Giannios; Eleftheria Chatzantonaki; Spyros Georgatos
Journal:  PLoS One       Date:  2017-01-24       Impact factor: 3.240

Review 9.  Histones and histone modifications in perinuclear chromatin anchoring: from yeast to man.

Authors:  Jennifer C Harr; Adriana Gonzalez-Sandoval; Susan M Gasser
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Review 10.  Lamin B Receptor: Interplay between Structure, Function and Localization.

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  10 in total

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