Literature DB >> 22038964

Genome sequence of Bacillus pumilus S-1, an efficient isoeugenol-utilizing producer for natural vanillin.

Fei Su1, Dongliang Hua, Zhaobin Zhang, Xiaoyu Wang, Hongzhi Tang, Fei Tao, Cui Tai, Qiulin Wu, Geng Wu, Ping Xu.   

Abstract

Bacillus pumilus S-1 is an efficient isoeugenol-utilizing producer of natural vanillin. The genome of B. pumilus S-1 contains the epoxide hydrolase and six candidate monooxygenases that make it possible to explore the mechanism involved in conversion of isoenguenol to vanillin in the B. pumilus strain.

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Year:  2011        PMID： 22038964      PMCID： PMC3209209          DOI： 10.1128/JB.06170-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

1.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

2.  Enhanced vanillin production from ferulic acid using adsorbent resin.

Authors:  Dongliang Hua; Cuiqing Ma; Lifu Song; Shan Lin; Zhaobin Zhang; Zixin Deng; Ping Xu
Journal:  Appl Microbiol Biotechnol       Date:  2006-11-24       Impact factor: 4.813

3.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors:  Daniel R Zerbino; Ewan Birney
Journal:  Genome Res       Date:  2008-03-18       Impact factor: 9.043

4.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

Review 5.  Biotechnological production of vanillin.

Authors:  H Priefert; J Rabenhorst; A Steinbüchel
Journal:  Appl Microbiol Biotechnol       Date:  2001-08       Impact factor: 4.813

Review 6.  Microbial transformation of propenylbenzenes for natural flavour production.

Authors:  Ping Xu; Dongliang Hua; Cuiqing Ma
Journal:  Trends Biotechnol       Date:  2007-11-07       Impact factor: 19.536

7.  Purification, characterization and gene cloning of isoeugenol-degrading enzyme from Pseudomonas putida IE27.

Authors:  Mamoru Yamada; Yukiyoshi Okada; Toyokazu Yoshida; Toru Nagasawa
Journal:  Arch Microbiol       Date:  2007-02-14       Impact factor: 2.552

8.  Vanillin production using metabolically engineered Escherichia coli under non-growing conditions.

Authors:  Paolo Barghini; Diana Di Gioia; Fabio Fava; Maurizio Ruzzi
Journal:  Microb Cell Fact       Date:  2007-04-16       Impact factor: 5.328

9.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

10.  The COG database: an updated version includes eukaryotes.

Authors:  Roman L Tatusov; Natalie D Fedorova; John D Jackson; Aviva R Jacobs; Boris Kiryutin; Eugene V Koonin; Dmitri M Krylov; Raja Mazumder; Sergei L Mekhedov; Anastasia N Nikolskaya; B Sridhar Rao; Sergei Smirnov; Alexander V Sverdlov; Sona Vasudevan; Yuri I Wolf; Jodie J Yin; Darren A Natale
Journal:  BMC Bioinformatics       Date:  2003-09-11       Impact factor: 3.169
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  3 in total

1.  Effective Biotransformation of Variety of Guaiacyl Lignin Monomers Into Vanillin by Bacillus pumilus.

Authors:  Kangjia Zuo; Huanan Li; Jianhui Chen; Qiuping Ran; Mengtian Huang; Xinxin Cui; Lili He; Jiashu Liu; Zhengbing Jiang
Journal:  Front Microbiol       Date:  2022-05-11       Impact factor: 6.064

2.  Genome sequence of Bacillus sp. strain HYC-10, isolated from intestinal tract contents from a marine fish (Mugil cephalus).

Authors:  Qiliang Lai; Yang Liu; Zongze Shao
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

3.  A novel Bacillus pumilus-related strain from tropical landfarm soil is capable of rapid dibenzothiophene degradation and biodesulfurization.

Authors:  Elizandra Bruschi Buzanello; Rachel Passos Rezende; Fernanda Maria Oliveira Sousa; Eric de Lima Silva Marques; Leandro Lopes Loguercio
Journal:  BMC Microbiol       Date:  2014-10-08       Impact factor: 3.605
  3 in total

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