Literature DB >> 22036925

An immunochemical method for detection and analysis of changes in methylome.

Deepti D Deobagkar1, Chitra Panikar, Shriram N Rajpathak, Nayana S Shaiwale, Sanjay Mukherjee.   

Abstract

DNA methylation is an important epigenetic modification involved in the ability of an organism to respond to stress and adaptation. It has been implicated in development, differentiation, oncogenesis, chromatin remodelling, nutrigenomics, and appears to play a pivotal role in many regulatory and adaptive functions. It is therefore important to analyze the status of DNA methylation and its changes under various developmental, carcinogenic, pharmacological, and environmental conditions. In this report we describe an immunochemical method for the detection of genome wide DNA methylation and its alterations under various conditions along with the analysis of DNA methyltransferase activity. The ability of this approach to detect and provide a map of methylomic changes in a genome facilitates assessment of various agents and conditions which can alter this important epigenetic signal. This experimental system permits rapid evaluation of potential target genes which would be modulated by DNA methylation changes and thus the gene networks that govern the processes. Copyright Â
© 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22036925     DOI: 10.1016/j.ymeth.2011.10.003

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  4 in total

Review 1.  Epigenetics with special reference to the human X chromosome inactivation and the enigma of Drosophila DNA methylation.

Authors:  Deepti Deobagkar
Journal:  J Genet       Date:  2018-06       Impact factor: 1.166

2.  Characterization and DNA methylation modulatory activity of gold nanoparticles synthesized by Pseudoalteromonas strain.

Authors:  Yugandhara M Patil; Shriram N Rajpathak; Deepti D Deobagkar
Journal:  J Biosci       Date:  2019-03       Impact factor: 1.826

3.  Presence of DNA methyltransferase activity and CpC methylation in Drosophila melanogaster.

Authors:  Chitra S Panikar; Shriram N Rajpathak; Varada Abhyankar; Saniya Deshmukh; Deepti D Deobagkar
Journal:  Mol Biol Rep       Date:  2015-11-07       Impact factor: 2.316

4.  Epigenetic modulation upon exposure of lung fibroblasts to TiO2 and ZnO nanoparticles: alterations in DNA methylation.

Authors:  Nayana A Patil; W N Gade; Deepti D Deobagkar
Journal:  Int J Nanomedicine       Date:  2016-09-07
  4 in total

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