Literature DB >> 22032556

Susceptibility variants on chromosome 7p21.1 suggest HDAC9 as a new candidate gene for male-pattern baldness.

F F Brockschmidt1, S Heilmann, J A Ellis, S Eigelshoven, S Hanneken, C Herold, S Moebus, M A Alblas, B Lippke, N Kluck, L Priebe, F A Degenhardt, R A Jamra, C Meesters, K-H Jöckel, R Erbel, S Harrap, J Schumacher, H Fröhlich, R Kruse, A M Hillmer, T Becker, M M Nöthen.   

Abstract

BACKGROUND: Male-pattern baldness (androgenetic alopecia, AGA) is the most common form of hair loss among humans. Research has shown that it is caused by genetic factors. Numerous studies have unequivocally identified two major genetic risk loci for AGA: the X-chromosomal AR/EDA2R locus, and the PAX1/FOXA2 locus on chromosome 20.
OBJECTIVES: To identify further candidate genes for AGA, and thus gain further insights into this phenotype.
METHODS: A German sample of 581 severely affected cases and 617 controls was used to perform a genome-wide association study. The identified associated locus was further analysed by fine-mapping, and then independently replicated in an Australian sample. Expression and pathway analyses were performed to characterize the susceptibility gene identified.
RESULTS: The most significant association signal was obtained for rs756853 (P = 1·64 × 10(-7) ), which is located intronically in the histone deacetylase 9 (HDAC9) gene. Fine-mapping and a family-based analysis revealed that rs756853 and the 6-kb distal rs2249817 were the most highly associated single nucleotide polymorphisms. The association finding was replicated in an independent Australian sample, when the analysis was restricted to severely affected cases and unaffected controls (P = 0·026). Analysis of rs2249817 in a combined sample of severely affected German and Australian cases and unaffected controls revealed a strong association signal (P = 9·09 × 10(-8) ). Tissue expression studies demonstrated HDAC9 expression in various tissues, including tissues of relevance to AGA. No strong genotypic effects were observed in genotype-specific expression or splice studies. Pathway analyses supported the hypothesis that HDAC9 plays a functional role in AGA via interaction with the AR gene.
CONCLUSIONS: The present study suggests that HDAC9 is the third AGA susceptibility gene.
© 2011 The Authors. BJD © 2011 British Association of Dermatologists.

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Year:  2011        PMID: 22032556     DOI: 10.1111/j.1365-2133.2011.10708.x

Source DB:  PubMed          Journal:  Br J Dermatol        ISSN: 0007-0963            Impact factor:   9.302


  18 in total

1.  Prediction of male-pattern baldness from genotypes.

Authors:  Fan Liu; Merel A Hamer; Stefanie Heilmann; Christine Herold; Susanne Moebus; Albert Hofman; André G Uitterlinden; Markus M Nöthen; Cornelia M van Duijn; Tamar Ec Nijsten; Manfred Kayser
Journal:  Eur J Hum Genet       Date:  2015-10-28       Impact factor: 4.246

2.  Variants in an Hdac9 intronic enhancer plasmid impact Twist1 expression in vitro.

Authors:  Tyler E Siekmann; Madelyn M Gerber; Amanda Ewart Toland
Journal:  Mamm Genome       Date:  2015-12-31       Impact factor: 2.957

Review 3.  Androgenetic alopecia: a review.

Authors:  Francesca Lolli; Francesco Pallotti; Alfredo Rossi; Maria C Fortuna; Gemma Caro; Andrea Lenzi; Andrea Sansone; Francesco Lombardo
Journal:  Endocrine       Date:  2017-03-28       Impact factor: 3.633

4.  Steiner tree methods for optimal sub-network identification: an empirical study.

Authors:  Afshin Sadeghi; Holger Fröhlich
Journal:  BMC Bioinformatics       Date:  2013-04-30       Impact factor: 3.169

5.  Relationship of early-onset baldness to prostate cancer in African-American men.

Authors:  Charnita Zeigler-Johnson; Knashawn H Morales; Elaine Spangler; Bao-Li Chang; Timothy R Rebbeck
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2013-03-26       Impact factor: 4.254

6.  Selective class IIa histone deacetylase inhibition via a nonchelating zinc-binding group.

Authors:  Mercedes Lobera; Kevin P Madauss; Denise T Pohlhaus; Quentin G Wright; Mark Trocha; Darby R Schmidt; Erkan Baloglu; Ryan P Trump; Martha S Head; Glenn A Hofmann; Monique Murray-Thompson; Benjamin Schwartz; Subhas Chakravorty; Zining Wu; Palwinder K Mander; Laurens Kruidenier; Robert A Reid; William Burkhart; Brandon J Turunen; James X Rong; Craig Wagner; Mary B Moyer; Carrow Wells; Xuan Hong; John T Moore; Jon D Williams; Dulce Soler; Shomir Ghosh; Michael A Nolan
Journal:  Nat Chem Biol       Date:  2013-03-24       Impact factor: 15.040

7.  Allele-specific imbalance mapping identifies HDAC9 as a candidate gene for cutaneous squamous cell carcinoma.

Authors:  Jessica L Fleming; Amy M Dworkin; Dawn C Allain; Soledad Fernandez; Lai Wei; Sara B Peters; O Hans Iwenofu; Katie Ridd; Boris C Bastian; Amanda Ewart Toland
Journal:  Int J Cancer       Date:  2013-07-16       Impact factor: 7.396

8.  Evaluation of DNA variants associated with androgenetic alopecia and their potential to predict male pattern baldness.

Authors:  Magdalena Marcińska; Ewelina Pośpiech; Sarah Abidi; Jeppe Dyrberg Andersen; Margreet van den Berge; Ángel Carracedo; Mayra Eduardoff; Anna Marczakiewicz-Lustig; Niels Morling; Titia Sijen; Małgorzata Skowron; Jens Söchtig; Denise Syndercombe-Court; Natalie Weiler; Peter M Schneider; David Ballard; Claus Børsting; Walther Parson; Chris Phillips; Wojciech Branicki
Journal:  PLoS One       Date:  2015-05-22       Impact factor: 3.240

9.  Genetic variants at 20p11 confer risk to androgenetic alopecia in the Chinese Han population.

Authors:  Bo Liang; Chunjun Yang; Xianbo Zuo; Yang Li; Yantao Ding; Yujun Sheng; Fusheng Zhou; Hui Cheng; Xiaodong Zheng; Gang Chen; Zhengwei Zhu; Jun Zhu; Xuhui Fu; Tao Wang; Ying Dong; Dawei Duan; Xianfa Tang; Huayang Tang; Jinping Gao; Liangdan Sun; Sen Yang; Xuejun Zhang
Journal:  PLoS One       Date:  2013-08-26       Impact factor: 3.240

Review 10.  Epigenetic memory: the Lamarckian brain.

Authors:  Andre Fischer
Journal:  EMBO J       Date:  2014-04-09       Impact factor: 11.598

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