Literature DB >> 22030606

Putting the DNA back into DNA methylation.

Adrian Bird.   

Abstract

Mesh：

Year:  2011        PMID： 22030606     DOI： 10.1038/ng.987

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   38.330


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  9 in total

Review 1.  Insulators: many functions, many mechanisms.

Authors:  Adam G West; Miklos Gaszner; Gary Felsenfeld
Journal:  Genes Dev       Date:  2002-02-01       Impact factor: 11.361

2.  Identification of genetic elements that autonomously determine DNA methylation states.

Authors:  Florian Lienert; Christiane Wirbelauer; Indrani Som; Ann Dean; Fabio Mohn; Dirk Schübeler
Journal:  Nat Genet       Date:  2011-10-02       Impact factor: 38.330

3.  Myc represses transcription through recruitment of DNA methyltransferase corepressor.

Authors:  Carmen Brenner; Rachel Deplus; Céline Didelot; Axelle Loriot; Emmanuelle Viré; Charles De Smet; Arantxa Gutierrez; Davide Danovi; David Bernard; Thierry Boon; Pier Giuseppe Pelicci; Bruno Amati; Tony Kouzarides; Yvan de Launoit; Luciano Di Croce; François Fuks
Journal:  EMBO J       Date:  2004-12-16       Impact factor: 11.598

4.  Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells.

Authors:  Irene M Min; Joshua J Waterfall; Leighton J Core; Robert J Munroe; John Schimenti; John T Lis
Journal:  Genes Dev       Date:  2011-04-01       Impact factor: 11.361

5.  Molecular biology. Demystifying DNA demethylation.

Authors:  Christopher S Nabel; Rahul M Kohli
Journal:  Science       Date:  2011-09-02       Impact factor: 47.728

Review 6.  CpG islands and the regulation of transcription.

Authors:  Aimée M Deaton; Adrian Bird
Journal:  Genes Dev       Date:  2011-05-15       Impact factor: 11.361

7.  Sp1 elements protect a CpG island from de novo methylation.

Authors:  M Brandeis; D Frank; I Keshet; Z Siegfried; M Mendelsohn; A Nemes; V Temper; A Razin; H Cedar
Journal:  Nature       Date:  1994-09-29       Impact factor: 49.962

8.  Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island.

Authors:  D Macleod; J Charlton; J Mullins; A P Bird
Journal:  Genes Dev       Date:  1994-10-01       Impact factor: 11.361

9.  Widespread transcription at neuronal activity-regulated enhancers.

Authors:  Tae-Kyung Kim; Martin Hemberg; Jesse M Gray; Allen M Costa; Daniel M Bear; Jing Wu; David A Harmin; Mike Laptewicz; Kellie Barbara-Haley; Scott Kuersten; Eirene Markenscoff-Papadimitriou; Dietmar Kuhl; Haruhiko Bito; Paul F Worley; Gabriel Kreiman; Michael E Greenberg
Journal:  Nature       Date:  2010-04-14       Impact factor: 49.962
  9 in total
  13 in total

1.  Polycomb Responds to Low Levels of Transcription.

Authors:  Georgina Berrozpe; Gene O Bryant; Katherine Warpinski; Dan Spagna; Santosh Narayan; Shivangi Shah; Mark Ptashne
Journal:  Cell Rep       Date:  2017-07-25       Impact factor: 9.423

Review 2.  The dynamics of DNA methylation in schizophrenia and related psychiatric disorders.

Authors:  Dennis R Grayson; Alessandro Guidotti
Journal:  Neuropsychopharmacology       Date:  2012-09-05       Impact factor: 7.853

3.  Disclosing the crosstalk among DNA methylation, transcription factors, and histone marks in human pluripotent cells through discovery of DNA methylation motifs.

Authors:  Phuc-Loi Luu; Hans R Schöler; Marcos J Araúzo-Bravo
Journal:  Genome Res       Date:  2013-10-22       Impact factor: 9.043

4.  The IGF1 P2 promoter is an epigenetic QTL for circulating IGF1 and human growth.

Authors:  Meriem Ouni; Yasemin Gunes; Marie-Pierre Belot; Anne-Laure Castell; Delphine Fradin; Pierre Bougnères
Journal:  Clin Epigenetics       Date:  2015-03-13       Impact factor: 6.551

5.  Silencing of Transposable Elements Mediated by 5-mC and Compensation of the Heterochromatin Content by Presence of B Chromosomes in Astyanax scabripinnis.

Authors:  Patrícia Barbosa; Zelinda Schemczssen-Graeff; André Marques; Maelin da Silva; Giovani Marino Favero; Bernardo Passos Sobreiro; Mara Cristina de Almeida; Orlando Moreira-Filho; Duílio Mazzoni Zerbinato de Andrade Silva; Fábio Porto-Foresti; Fausto Foresti; Roberto Ferreira Artoni
Journal:  Cells       Date:  2021-05-11       Impact factor: 6.600

6.  Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.

Authors:  Solange Moréra; Inga Grin; Armelle Vigouroux; Sophie Couvé; Véronique Henriot; Murat Saparbaev; Alexander A Ishchenko
Journal:  Nucleic Acids Res       Date:  2012-07-30       Impact factor: 16.971

7.  MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data.

Authors:  Guillermo Barturen; Antonio Rueda; José L Oliver; Michael Hackenberg
Journal:  F1000Res       Date:  2013-10-15

8.  Inactive or moderately active human promoters are enriched for inter-individual epialleles.

Authors:  Carolina Gemma; Sreeram V Ramagopalan; Thomas A Down; Huriya Beyan; Mohammed I Hawa; Michelle L Holland; Paul J Hurd; Gavin Giovannoni; R David Leslie; George C Ebers; Vardhman K Rakyan
Journal:  Genome Biol       Date:  2013-05-25       Impact factor: 13.583

9.  Sequence-level mechanisms of human epigenome evolution.

Authors:  James G D Prendergast; Emily V Chambers; Colin A M Semple
Journal:  Genome Biol Evol       Date:  2014-06-24       Impact factor: 3.416

10.  Mapping DNA methylation across development, genotype and schizophrenia in the human frontal cortex.

Authors:  Andrew E Jaffe; Yuan Gao; Amy Deep-Soboslay; Ran Tao; Thomas M Hyde; Daniel R Weinberger; Joel E Kleinman
Journal:  Nat Neurosci       Date:  2015-11-30       Impact factor: 24.884
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