Literature DB >> 22027585

Single nucleotide polymorphism upstream of interleukin 28B associated with phase 1 and phase 2 of early viral kinetics in patients infected with HCV genotype 1.

Charles D Howell1, Alexis Gorden, Kathleen A Ryan, Alexander J Thompson, Chadi Ibrahim, Michael Fried, Nezam H Afdhal, John G McHutchison, Kevin V Shianna, David B Goldstein, Alan R Shuldiner, Braxton D Mitchell.   

Abstract

BACKGROUND & AIMS: We studied the relationship between IL28B gene-related SNP rs12979860 and early viral kinetics (day 0-28) during peginterferon and ribavirin treatment, in 173 African Americans (AA) and 188 Caucasian Americans (CA) with HCV genotype 1.
METHODS: We studied the relationship between IL28B 16 gene-related SNP rs12979860 and early viral kinetics (day 0-28) 17 during peginterferon and ribavirin treatment, in 171 African 18 Americans (AA) and 188 Caucasian Americans (CA) with HCV 19 genotype 1.
RESULTS: Compared to non-C/C genotypes, C/C was associated with greater declines in serum HCV RNA during phase 1 (day 0-2), phase 2 (day 7-28), and day 0-28 and higher response (undetected HCV RNA) rates at weeks 4 and 12 in AA and CA. A static phase and increases in HCV RNA from day 2 to 7 were more common in patients with non-C/C genotypes. C/C was also associated with higher week 24, 48, and 72 response rates in CA (p<0.01) but not in AA. At baseline, SNP genotype was the only independent predictor of phase 1; SNP genotype and phase 1 were independent predictors of phase 2 (p<0.001). There were no racial differences in HCV RNA declines during phase 1, day 2-7, phase 2, and day 0-28 with the same SNP genotype. AA with C/C and C/T genotypes had lower week 24, 48, and 72 (SVR) rates than did CA (p=0.03). SNP C/C predicted higher SVR rates in AA and CA with high baseline HCV RNA (≥ 600,000 IU/ml), and in CA with ≥ 1 log(10)IU/ml decrease in HCV RNA from day 0 to 28.
CONCLUSIONS: SNP rs12979860 is strongly associated with both phase 1 and phase 2 HCV RNA kinetics in AA and CA with HCV genotype 1.
Copyright © 2012 European Association for the Study of the Liver. Published by Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 22027585      PMCID: PMC3884806          DOI: 10.1016/j.jhep.2011.10.004

Source DB:  PubMed          Journal:  J Hepatol        ISSN: 0168-8278            Impact factor:   25.083


  21 in total

1.  Peginterferon and ribavirin treatment in African American and Caucasian American patients with hepatitis C genotype 1.

Authors:  Hari S Conjeevaram; Michael W Fried; Lennox J Jeffers; Norah A Terrault; Thelma E Wiley-Lucas; Nezam Afdhal; Robert S Brown; Steven H Belle; Jay H Hoofnagle; David E Kleiner; Charles D Howell
Journal:  Gastroenterology       Date:  2006-08       Impact factor: 22.682

2.  Boceprevir for untreated chronic HCV genotype 1 infection.

Authors:  Fred Poordad; Jonathan McCone; Bruce R Bacon; Savino Bruno; Michael P Manns; Mark S Sulkowski; Ira M Jacobson; K Rajender Reddy; Zachary D Goodman; Navdeep Boparai; Mark J DiNubile; Vilma Sniukiene; Clifford A Brass; Janice K Albrecht; Jean-Pierre Bronowicki
Journal:  N Engl J Med       Date:  2011-03-31       Impact factor: 91.245

3.  IL28B polymorphisms predict reduction of HCV RNA from the first day of therapy in chronic hepatitis C.

Authors:  P-Y Bochud; S Bibert; F Negro; B Haagmans; A Soulier; C Ferrari; G Missale; S Zeuzem; J-M Pawlotsky; S Schalm; K Hellstrand; A U Neumann; M Lagging
Journal:  J Hepatol       Date:  2011-02-25       Impact factor: 25.083

4.  Ribavirin improves early responses to peginterferon through improved interferon signaling.

Authors:  Jordan J Feld; Glen A Lutchman; Theo Heller; Koji Hara; Julie K Pfeiffer; Richard D Leff; Claudia Meek; Maria Rivera; Myung Ko; Christopher Koh; Yaron Rotman; Marc G Ghany; Vanessa Haynes-Williams; Avidan U Neumann; T Jake Liang; Jay H Hoofnagle
Journal:  Gastroenterology       Date:  2010-03-17       Impact factor: 22.682

5.  Peginterferon alfa-2b plus ribavirin compared with interferon alfa-2b plus ribavirin for initial treatment of chronic hepatitis C: a randomised trial.

Authors:  M P Manns; J G McHutchison; S C Gordon; V K Rustgi; M Shiffman; R Reindollar; Z D Goodman; K Koury; M Ling; J K Albrecht
Journal:  Lancet       Date:  2001-09-22       Impact factor: 79.321

6.  Effect of the 5' non-translated region on self-assembly of hepatitis C virus genotype 1a structural proteins produced in insect cells.

Authors:  Christel Girard; Marc Ravallec; Marcel Mariller; Jean-Pierre Bossy; Annie Cahour; Miguel López-Ferber; Gérard Devauchelle; Geneviève Inchauspé; Martine Duonor-Cérutti
Journal:  J Gen Virol       Date:  2004-12       Impact factor: 3.891

7.  First phase viral kinetic parameters as predictors of treatment response and their influence on the second phase viral decline.

Authors:  Jennifer E Layden; Thomas J Layden; K Rajender Reddy; Rachel S Levy-Drummer; Jennifer Poulakos; Avidan U Neumann
Journal:  J Viral Hepat       Date:  2002-09       Impact factor: 3.728

8.  Effect of ribavirin on hepatitis C viral kinetics in patients treated with pegylated interferon.

Authors:  Eva Herrmann; Jung-Hun Lee; George Marinos; Marlene Modi; Stefan Zeuzem
Journal:  Hepatology       Date:  2003-06       Impact factor: 17.425

9.  Viral dynamics and response differences in HCV-infected African American and white patients treated with IFN and ribavirin.

Authors:  Jennifer E Layden-Almer; Ruy M Ribeiro; Thelma Wiley; Alan S Perelson; Thomas J Layden
Journal:  Hepatology       Date:  2003-06       Impact factor: 17.425

10.  Peginterferon alfa-2a plus ribavirin for chronic hepatitis C virus infection.

Authors:  Michael W Fried; Mitchell L Shiffman; K Rajender Reddy; Coleman Smith; George Marinos; Fernando L Gonçales; Dieter Häussinger; Moises Diago; Giampiero Carosi; Daniel Dhumeaux; Antonio Craxi; Amy Lin; Joseph Hoffman; Jian Yu
Journal:  N Engl J Med       Date:  2002-09-26       Impact factor: 91.245

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  15 in total

1.  IFNL3 genotype is associated with differential induction of IFNL3 in primary human hepatocytes.

Authors:  Fuat Kurbanov; Yonghak Kim; Rachel Latanich; Pooja Chaudhari; Ramy El-Diwany; Matt Knabel; Abraham J Kandathil; Andrew Cameron; Andrea Cox; Yoon-Young Jang; David L Thomas; Ashwin Balagopal
Journal:  Antivir Ther       Date:  2015-06-25

2.  A variant upstream of IFNL3 (IL28B) creating a new interferon gene IFNL4 is associated with impaired clearance of hepatitis C virus.

Authors:  Ludmila Prokunina-Olsson; Brian Muchmore; Wei Tang; Ruth M Pfeiffer; Heiyoung Park; Harold Dickensheets; Dianna Hergott; Patricia Porter-Gill; Adam Mumy; Indu Kohaar; Sabrina Chen; Nathan Brand; McAnthony Tarway; Luyang Liu; Faruk Sheikh; Jacquie Astemborski; Herbert L Bonkovsky; Brian R Edlin; Charles D Howell; Timothy R Morgan; David L Thomas; Barbara Rehermann; Raymond P Donnelly; Thomas R O'Brien
Journal:  Nat Genet       Date:  2013-01-06       Impact factor: 38.330

3.  Early viral kinetics during hepatitis C virus genotype 6 treatment according to IL28B polymorphisms.

Authors:  Srunthron Akkarathamrongsin; Sunchai Payungporn; Vo Duy Thong; Kittiyod Poovorawan; Phisit Prapunwattana; Yong Poovorawan; Pisit Tangkijvanich
Journal:  World J Gastroenterol       Date:  2014-08-14       Impact factor: 5.742

4.  Optimum ribavirin exposure overcomes racial disparity in efficacy of peginterferon and ribavirin treatment for hepatitis C genotype 1.

Authors:  Runyan Jin; Ling Cai; Ming Tan; John G McHutchison; Thomas C Dowling; Charles D Howell
Journal:  Am J Gastroenterol       Date:  2012-10-23       Impact factor: 10.864

Review 5.  Genetic variants at the IFNL3 locus and their association with hepatitis C virus infections reveal novel insights into host-virus interactions.

Authors:  Sreedhar Chinnaswamy
Journal:  J Interferon Cytokine Res       Date:  2014-02-20       Impact factor: 2.607

Review 6.  Interleukin 28B polymorphisms as predictors of sustained virological response in chronic hepatitis C: systematic review and meta-analysis.

Authors:  E Cariani; L Roli; G Missale; E Villa; C Ferrari; T Trenti
Journal:  Pharmacogenomics J       Date:  2015-04-28       Impact factor: 3.550

7.  Clinical Pharmacogenetics Implementation Consortium (CPIC) guidelines for IFNL3 (IL28B) genotype and PEG interferon-α-based regimens.

Authors:  A J Muir; L Gong; S G Johnson; M T M Lee; M S Williams; T E Klein; K E Caudle; D R Nelson
Journal:  Clin Pharmacol Ther       Date:  2013-10-04       Impact factor: 6.875

8.  Understanding triphasic HCV decline during treatment in the era of IL28B polymorphisms and direct acting antiviral agents via mathematical modeling.

Authors:  Harel Dahari; Scott J Cotler; Thomas J Layden; Alan S Perelson
Journal:  J Hepatol       Date:  2012-12-13       Impact factor: 25.083

Review 9.  Individualization of chronic hepatitis C treatment according to the host characteristics.

Authors:  Nikolaos K Gatselis; Kalliopi Zachou; Asterios Saitis; Maria Samara; George N Dalekos
Journal:  World J Gastroenterol       Date:  2014-03-21       Impact factor: 5.742

10.  High effectiveness of peginterferon alfa-2a plus ribavirin therapy in Korean patients with chronic hepatitis C in clinical practice.

Authors:  Nae-Yun Heo; Young-Suk Lim; Han Chu Lee; Yung Sang Lee; Kang Mo Kim; Kwan Soo Byun; Kwang-Hyub Han; Kwan Sik Lee; Seung Woon Paik; Seung Kew Yoon; Dong Jin Suh
Journal:  Clin Mol Hepatol       Date:  2013-03-25
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