Literature DB >> 22023828

Understanding histone acetyltransferase Rtt109 structure and function: how many chaperones does it take?

Sheena D'Arcy1, Karolin Luger.   

Abstract

Rtt109 (Regulator of Ty1 Transposition 109) is a fungal-specific histone acetyltransferase required for modification of histone H3 K9, K27 and K56. These acetylations are associated with nascent histone H3 and play an integral role in replication-coupled and repair-coupled nucleosome assembly. Rtt109 is unique among acetyltransferases as it is activated by a histone chaperone; either Vps75 (Vacuolar Protein Sorting 75) or Asf1 (Anti-silencing Function 1). Recent biochemical, structural and genetic studies have shed light on the intricacies of this activation. It is now clear that Rtt109-Asf1 acetylates K56, while Rtt109-Vps75 acetylates K9 and K27. This reinforces that Asf1 and Vps75 activate Rtt109 via distinct molecular mechanisms. Structures of Rtt109-Vps75 further imply that Vps75 positions histone H3 in the Rtt109 active site. These structures however raise questions regarding the stoichiometry of the Rtt109-Vps75 complex. This has ramifications for determining the physiological Rtt109 substrate.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22023828      PMCID: PMC3232334          DOI: 10.1016/j.sbi.2011.09.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  31 in total

1.  p300-mediated acetylation facilitates the transfer of histone H2A-H2B dimers from nucleosomes to a histone chaperone.

Authors:  T Ito; T Ikehara; T Nakagawa; W L Kraus; M Muramatsu
Journal:  Genes Dev       Date:  2000-08-01       Impact factor: 11.361

2.  A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

Authors:  Hiroshi Masumoto; David Hawke; Ryuji Kobayashi; Alain Verreault
Journal:  Nature       Date:  2005-07-14       Impact factor: 49.962

3.  Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication.

Authors:  Junhong Han; Hui Zhou; Bruce Horazdovsky; Kangling Zhang; Rui-Ming Xu; Zhiguo Zhang
Journal:  Science       Date:  2007-02-02       Impact factor: 47.728

4.  Structural basis for the histone chaperone activity of Asf1.

Authors:  Christine M English; Melissa W Adkins; Joshua J Carson; Mair E A Churchill; Jessica K Tyler
Journal:  Cell       Date:  2006-11-03       Impact factor: 41.582

5.  Relationship between the structure of SET/TAF-Ibeta/INHAT and its histone chaperone activity.

Authors:  Shinsuke Muto; Miki Senda; Yusuke Akai; Lui Sato; Toru Suzuki; Ryozo Nagai; Toshiya Senda; Masami Horikoshi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-06       Impact factor: 11.205

6.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

7.  Rtt109 is required for proper H3K56 acetylation: a chromatin mark associated with the elongating RNA polymerase II.

Authors:  Jessica Schneider; Pratibha Bajwa; Farley C Johnson; Sukesh R Bhaumik; Ali Shilatifard
Journal:  J Biol Chem       Date:  2006-10-17       Impact factor: 5.157

8.  Dual roles of p300 in chromatin assembly and transcriptional activation in cooperation with nucleosome assembly protein 1 in vitro.

Authors:  Hiroshi Asahara; Sophie Tartare-Deckert; Takeya Nakagawa; Tsuyoshi Ikehara; Fumiko Hirose; Tony Hunter; Takashi Ito; Marc Montminy
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

9.  Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines.

Authors:  M H Kuo; J E Brownell; R E Sobel; T A Ranalli; R G Cook; D G Edmondson; S Y Roth; C D Allis
Journal:  Nature       Date:  1996-09-19       Impact factor: 49.962

10.  The activity of the histone chaperone yeast Asf1 in the assembly and disassembly of histone H3/H4-DNA complexes.

Authors:  Douglas C Donham; Jean K Scorgie; Mair E A Churchill
Journal:  Nucleic Acids Res       Date:  2011-03-29       Impact factor: 16.971

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  20 in total

Review 1.  Histone-modifying enzymes, histone modifications and histone chaperones in nucleosome assembly: Lessons learned from Rtt109 histone acetyltransferases.

Authors:  Jayme L Dahlin; Xiaoyue Chen; Michael A Walters; Zhiguo Zhang
Journal:  Crit Rev Biochem Mol Biol       Date:  2014-11-03       Impact factor: 8.250

2.  Proteins: histones and chromatin.

Authors:  Patrick Cramer; Cynthia Wolberger
Journal:  Curr Opin Struct Biol       Date:  2011-11-11       Impact factor: 6.809

3.  Class-IIa Histone Deacetylase Inhibition Promotes the Growth of Neural Processes and Protects Them Against Neurotoxic Insult.

Authors:  Louise M Collins; Luc J Adriaanse; Surabhi D Theratile; Shane V Hegarty; Aideen M Sullivan; Gerard W O'Keeffe
Journal:  Mol Neurobiol       Date:  2014-07-29       Impact factor: 5.590

4.  Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.

Authors:  Lin Zhang; Albert Serra-Cardona; Hui Zhou; Mingzhu Wang; Na Yang; Zhiguo Zhang; Rui-Ming Xu
Journal:  Cell       Date:  2018-07-26       Impact factor: 41.582

5.  Chaperone-mediated acetylation of histones by Rtt109 identified by quantitative proteomics.

Authors:  Nebiyu Abshiru; Kevin Ippersiel; Yong Tang; Hua Yuan; Ronen Marmorstein; Alain Verreault; Pierre Thibault
Journal:  J Proteomics       Date:  2012-10-02       Impact factor: 4.044

6.  The carboxyl terminus of Rtt109 functions in chaperone control of histone acetylation.

Authors:  Ernest Radovani; Matthew Cadorin; Tahireh Shams; Suzan El-Rass; Abdel R Karsou; Hyun-Soo Kim; Christoph F Kurat; Michael-Christopher Keogh; Jack F Greenblatt; Jeffrey S Fillingham
Journal:  Eukaryot Cell       Date:  2013-03-01

7.  Histone chaperones Nap1 and Vps75 regulate histone acetylation during transcription elongation.

Authors:  Yu-Ming Xue; Anna K Kowalska; Kamila Grabowska; Katarzyna Przybyt; Magda A Cichewicz; Brian C Del Rosario; Lucy F Pemberton
Journal:  Mol Cell Biol       Date:  2013-02-11       Impact factor: 4.272

8.  Characterization of the Pneumocystis carinii histone acetyltransferase chaperone proteins PcAsf1 and PcVps75.

Authors:  Jakrapun Pupaibool; Theodore J Kottom; Kelly Bouchonville; Andrew H Limper
Journal:  Infect Immun       Date:  2013-04-08       Impact factor: 3.441

9.  Fungus-specific sirtuin HstD coordinates secondary metabolism and development through control of LaeA.

Authors:  Moriyuki Kawauchi; Mika Nishiura; Kazuhiro Iwashita
Journal:  Eukaryot Cell       Date:  2013-05-31

Review 10.  Histone chaperone networks shaping chromatin function.

Authors:  Colin M Hammond; Caroline B Strømme; Hongda Huang; Dinshaw J Patel; Anja Groth
Journal:  Nat Rev Mol Cell Biol       Date:  2017-01-05       Impact factor: 94.444

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