Literature DB >> 22023548

Pharmacological validation of Trypanosoma brucei phosphodiesterases B1 and B2 as druggable targets for African sleeping sickness.

Nicholas D Bland1, Cuihua Wang, Craig Tallman, Alden E Gustafson, Zhouxi Wang, Trent D Ashton, Stefan O Ochiana, Gregory McAllister, Kristina Cotter, Anna P Fang, Lara Gechijian, Norman Garceau, Rajiv Gangurde, Ron Ortenberg, Mary Jo Ondrechen, Robert K Campbell, Michael P Pollastri.   

Abstract

Neglected tropical disease drug discovery requires application of pragmatic and efficient methods for development of new therapeutic agents. In this report, we describe our target repurposing efforts for the essential phosphodiesterase (PDE) enzymes TbrPDEB1 and TbrPDEB2 of Trypanosoma brucei , the causative agent for human African trypanosomiasis (HAT). We describe protein expression and purification, assay development, and benchmark screening of a collection of 20 established human PDE inhibitors. We disclose that the human PDE4 inhibitor piclamilast, and some of its analogues, show modest inhibition of TbrPDEB1 and B2 and quickly kill the bloodstream form of the subspecies T. brucei brucei . We also report the development of a homology model of TbrPDEB1 that is useful for understanding the compound-enzyme interactions and for comparing the parasitic and human enzymes. Our profiling and early medicinal chemistry results strongly suggest that human PDE4 chemotypes represent a better starting point for optimization of TbrPDEB inhibitors than those that target any other human PDEs.

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Year:  2011        PMID: 22023548      PMCID: PMC3228873          DOI: 10.1021/jm201148s

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  26 in total

1.  Trypanosome cyclic nucleotide phosphodiesterase 2B binds cAMP through its GAF-A domain.

Authors:  Sunil Laxman; Ana Rascón; Joseph A Beavo
Journal:  J Biol Chem       Date:  2004-11-24       Impact factor: 5.157

2.  Structural basis for the activity of drugs that inhibit phosphodiesterases.

Authors:  Graeme L Card; Bruce P England; Yoshihisa Suzuki; Daniel Fong; Ben Powell; Byunghun Lee; Catherine Luu; Maryam Tabrizizad; Sam Gillette; Prabha N Ibrahim; Dean R Artis; Gideon Bollag; Michael V Milburn; Sung-Hou Kim; Joseph Schlessinger; Kam Y J Zhang
Journal:  Structure       Date:  2004-12       Impact factor: 5.006

3.  VERIFY3D: assessment of protein models with three-dimensional profiles.

Authors:  D Eisenberg; R Lüthy; J U Bowie
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

Review 4.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

5.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

6.  Target repurposing for neglected diseases.

Authors:  Michael P Pollastri; Robert K Campbell
Journal:  Future Med Chem       Date:  2011-08       Impact factor: 3.808

7.  Short communication: cultivation of bloodstream forms of Trypanosoma brucei and T. evansi in a serum-free medium.

Authors:  H Hirumi; S Martin; K Hirumi; N Inoue; H Kanbara; A Saito; N Suzuki
Journal:  Trop Med Int Health       Date:  1997-03       Impact factor: 2.622

Review 8.  Update on the therapeutic potential of PDE4 inhibitors.

Authors:  Hazel J Dyke; John G Montana
Journal:  Expert Opin Investig Drugs       Date:  2002-01       Impact factor: 6.206

9.  Cloning and characterization of a cAMP-specific phosphodiesterase (TbPDE2B) from Trypanosoma brucei.

Authors:  Ana Rascón; Scott H Soderling; Jonathan B Schaefer; Joseph A Beavo
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

10.  Selective type IV phosphodiesterase inhibitors as antiasthmatic agents. The syntheses and biological activities of 3-(cyclopentyloxy)-4-methoxybenzamides and analogues.

Authors:  M J Ashton; D C Cook; G Fenton; J A Karlsson; M N Palfreyman; D Raeburn; A J Ratcliffe; J E Souness; S Thurairatnam; N Vicker
Journal:  J Med Chem       Date:  1994-05-27       Impact factor: 7.446

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  21 in total

1.  Evaluation of pyrrolidine and pyrazolone derivatives as inhibitors of trypanosomal phosphodiesterase B1 (TbrPDEB1).

Authors:  Emanuele Amata; Nicholas D Bland; Robert K Campbell; Michael P Pollastri
Journal:  Tetrahedron Lett       Date:  2015-05-20       Impact factor: 2.415

2.  Synthesis and evaluation of human phosphodiesterases (PDE) 5 inhibitor analogs as trypanosomal PDE inhibitors. Part 2. Tadalafil analogs.

Authors:  Stefan O Ochiana; Alden Gustafson; Nicholas D Bland; Cuihua Wang; Michael J Russo; Robert K Campbell; Michael P Pollastri
Journal:  Bioorg Med Chem Lett       Date:  2012-02-09       Impact factor: 2.823

3.  Synthesis and evaluation of human phosphodiesterases (PDE) 5 inhibitor analogs as trypanosomal PDE inhibitors. Part 1. Sildenafil analogs.

Authors:  Cuihua Wang; Trent D Ashton; Alden Gustafson; Nicholas D Bland; Stefan O Ochiana; Robert K Campbell; Michael P Pollastri
Journal:  Bioorg Med Chem Lett       Date:  2012-02-09       Impact factor: 2.823

4.  Repurposing human PDE4 inhibitors for neglected tropical diseases: design, synthesis and evaluation of cilomilast analogues as Trypanosoma brucei PDEB1 inhibitors.

Authors:  Emanuele Amata; Nicholas D Bland; Charles T Hoyt; Luca Settimo; Robert K Campbell; Michael P Pollastri
Journal:  Bioorg Med Chem Lett       Date:  2014-07-30       Impact factor: 2.823

5.  EVALUATION OF AROMATIC 6-SUBSTITUTED THIENOPYRIMIDINES AS SCAFFOLDS AGAINST PARASITES THAT CAUSE TRYPANOSOMIASIS, LEISHMANIASIS, AND MALARIA.

Authors:  Jennifer L Woodring; Gautam Patel; Jessey Erath; Ranjan Behera; Patricia J Lee; Susan E Leed; Ana Rodriguez; Richard J Sciotti; Kojo Mensa-Wilmot; Michael P Pollastri
Journal:  Medchemcomm       Date:  2015-02       Impact factor: 3.597

6.  Optimization of physicochemical properties for 4-anilinoquinazoline inhibitors of trypanosome proliferation.

Authors:  Jennifer L Woodring; Kelly A Bachovchin; Kimberly G Brady; Mitchell F Gallerstein; Jessey Erath; Scott Tanghe; Susan E Leed; Ana Rodriguez; Kojo Mensa-Wilmot; Richard J Sciotti; Michael P Pollastri
Journal:  Eur J Med Chem       Date:  2017-10-06       Impact factor: 6.514

7.  Synthesis and assessment of catechol diether compounds as inhibitors of trypanosomal phosphodiesterase B1 (TbrPDEB1).

Authors:  Jennifer L Woodring; Nicholas D Bland; Stefan O Ochiana; Robert K Campbell; Michael P Pollastri
Journal:  Bioorg Med Chem Lett       Date:  2013-08-21       Impact factor: 2.823

8.  The human Aurora kinase inhibitor danusertib is a lead compound for anti-trypanosomal drug discovery via target repurposing.

Authors:  Stefan O Ochiana; Vidya Pandarinath; Zhouxi Wang; Rishika Kapoor; Mary Jo Ondrechen; Larry Ruben; Michael P Pollastri
Journal:  Eur J Med Chem       Date:  2012-07-31       Impact factor: 6.514

9.  Kinase scaffold repurposing for neglected disease drug discovery: discovery of an efficacious, lapatinib-derived lead compound for trypanosomiasis.

Authors:  Gautam Patel; Caitlin E Karver; Ranjan Behera; Paul J Guyett; Catherine Sullenberger; Peter Edwards; Norma E Roncal; Kojo Mensa-Wilmot; Michael P Pollastri
Journal:  J Med Chem       Date:  2013-05-03       Impact factor: 7.446

10.  Discovery of novel Trypanosoma brucei phosphodiesterase B1 inhibitors by virtual screening against the unliganded TbrPDEB1 crystal structure.

Authors:  Chimed Jansen; Huanchen Wang; Albert J Kooistra; Chris de Graaf; Kristina M Orrling; Hermann Tenor; Thomas Seebeck; David Bailey; Iwan J P de Esch; Hengming Ke; Rob Leurs
Journal:  J Med Chem       Date:  2013-03-01       Impact factor: 7.446

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