Literature DB >> 22021577

Flavobacterium compostarboris sp. nov., isolated from leaf-and-branch compost, and emended descriptions of Flavobacterium hercynium, Flavobacterium resistens and Flavobacterium johnsoniae.

Joong-Jae Kim1,2, Eiko Kanaya2, Hang-Yeon Weon3, Yuichi Koga2, Kazufumi Takano4,2, Peter F Dunfield1, Soon-Wo Kwon3, Shigenori Kanaya2.   

Abstract

A strictly aerobic, Gram-negative, yellow-pigmented, non-spore-forming rod, designated 15C3(T), was isolated from aerobic leaf-and-branch compost at EXPO Park in Osaka, Japan. Growth was observed at 9-33 °C (optimum 25 °C) and pH 5.6-7.9 (optimum pH 6.1-7.0). No growth occurred with >2% (w/v) NaCl. Strain 15C3(T) reduced nitrate to nitrogen and showed catalase activity but not oxidase activity. The predominant fatty acids were iso-C(15:0), iso-C(17:0) 3-OH and summed feature 3 (comprising C(16:1)ω7c and/or iso-C(15:0) 2-OH). The isolate contained phosphatidylethanolamine as the major polar lipid and menaquinone-6 as the major respiratory quinone. The G+C content of the genomic DNA of strain 15C3(T) was 33.6 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 15C3(T) belonged to the genus Flavobacterium and was most closely related to Flavobacterium hercynium WB 4.2-33(T) (96.9% sequence similarity). On the basis of phenotypic and phylogenetic distinctiveness, strain 15C3(T) is considered to represent a novel species in the genus Flavobacterium, for which the name Flavobacterium compostarboris sp. nov. is proposed. The type strain is 15C3(T) ( = KACC 14224(T)  = JCM 16527(T)). Emended descriptions of F. hercynium, Flavobacterium resistens and Flavobacterium johnsoniae are also given.

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Year:  2011        PMID: 22021577     DOI: 10.1099/ijs.0.032920-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

2.  Flavobacterium hungaricum sp. nov. a novel soil inhabitant, cellulolytic bacterium isolated from plough field.

Authors:  Rózsa Máté; József Kutasi; Ildikó Bata-Vidács; Judit Kosztik; József Kukolya; Erika Tóth; Károly Bóka; András Táncsics; Gábor Kovács; István Nagy; Ákos Tóth
Journal:  Arch Microbiol       Date:  2022-05-06       Impact factor: 2.667

3.  Changes in soil bacterial and fungal communities in response to Bacillus megaterium NCT-2 inoculation in secondary salinized soil.

Authors:  Bin Wang; Shaohua Chu; Xiaorui Liu; Dan Zhang; Xiaotong Chai; Xijia Yang; Yuee Zhi; Yaowei Chi; Pei Zhou
Journal:  PeerJ       Date:  2021-10-12       Impact factor: 2.984

4.  Antibacterial activity of aquatic gliding bacteria.

Authors:  Yutthapong Sangnoi; Theerasak Anantapong; Akkharawit Kanjana-Opas
Journal:  Springerplus       Date:  2016-02-04
  4 in total

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