Literature DB >> 22019431

Gene symbol precision.

Barbara Bennani-Baiti1, Idriss M Bennani-Baiti.   

Abstract

Several gene databases, including heavily used ones such as the National Center for Biotechnology Information (NCBI) database, erroneously assign, on occasion, literature references to genes or proteins. These mistakes are mostly due to an overlap in gene aliases, whereby two distinct genes share a pseudonym. This is particularly confusing when the gene products have also biological properties in common, are part of signaling pathways that cross-talk to one another, or are regulated by the same effectors. We present examples spanning several research fields including apoptosis, ubiquitin-dependent degradation, signaling by Notch, Wnt, and small G proteins, transporters of glutathione conjugates of electrophiles, and mitochondrial and ribosomal RNA genes. To solve the problem, we argue in favor of including Entrez gene numbers in papers submitted for publication as unique gene identifiers to allow precise identification of genes and species studied.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 22019431     DOI: 10.1016/j.gene.2011.09.035

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  3 in total

1.  Integration of ERα-PELP1-HER2 signaling by LSD1 (KDM1A/AOF2) offers combinatorial therapeutic opportunities to circumventing hormone resistance in breast cancer.

Authors:  Idriss M Bennani-Baiti
Journal:  Breast Cancer Res       Date:  2012-09-17       Impact factor: 6.466

2.  Inflammation Modulates RLIP76/RALBP1 Electrophile-Glutathione Conjugate Transporter and Housekeeping Genes in Human Blood-Brain Barrier Endothelial Cells.

Authors:  Barbara Bennani-Baiti; Stefan Toegel; Helmut Viernstein; Ernst Urban; Christian R Noe; Idriss M Bennani-Baiti
Journal:  PLoS One       Date:  2015-09-25       Impact factor: 3.240

Review 3.  Cancer Bioinformatic Methods to Infer Meaningful Data From Small-Size Cohorts.

Authors:  Nabila Bennani-Baiti; Idriss M Bennani-Baiti
Journal:  Cancer Inform       Date:  2015-11-02
  3 in total

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