Literature DB >> 22014411

From cryptogene to gene? ND8 editing domain reduction in insect trypanosomatids.

Evgeny S Gerasimov1, Alexei Yu Kostygov, Shi Yan, Alexander A Kolesnikov.   

Abstract

Mitochondrial ND8 gene is pan-edited in most known trypanosomatid species and 5'-edited only in a few trypanosomatid species. In this work, the ND8 nucleotide sequences from three species of insect trypanosomatids ("Wallaceina" sp. Wsd, Leptomonas rigidus and Leptomonas collosoma) were obtained and compared with previously known ND8 cryptogene sequences and mature mRNA sequences from other trypanosomatid species. We found a new pattern of editing: only 18 U residues are inserted in the 5' region of the primary transcript in all investigated species and the potential start codon is encoded on the DNA level. This is the first case when a pre-edited ND8 sequence is found to contain a putative ORF. Previously, a 5'-edited ND8 cryptogene was known only from Strigomonas oncopelti, but it contained only about half of the ORF and no start codon. Here we present the ND8 gene sequence from Angomonas deanei which has similar cryptogene structure. We also show that according to 18S rRNA phylogenetic analysis, the species with the encoded ORF group together and so do species with the 5'-edited and pan-edited forms of the gene. This result sheds light on the evolution of cryptogene structure which involved multiple events of editing domain length reduction.
Copyright © 2011 Elsevier GmbH. All rights reserved.

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Year:  2011        PMID: 22014411     DOI: 10.1016/j.ejop.2011.09.002

Source DB:  PubMed          Journal:  Eur J Protistol        ISSN: 0932-4739            Impact factor:   3.020


  9 in total

1.  Kinetoplast DNA-encoded ribosomal protein S12: a possible functional link between mitochondrial RNA editing and translation in Trypanosoma brucei.

Authors:  Inna Aphasizheva; Dmitri A Maslov; Ruslan Aphasizhev
Journal:  RNA Biol       Date:  2013-10-14       Impact factor: 4.652

Review 2.  High throughput sequencing revolution reveals conserved fundamentals of U-indel editing.

Authors:  Sara L Zimmer; Rachel M Simpson; Laurie K Read
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-06-11       Impact factor: 9.957

3.  Trypanosomatid mitochondrial RNA editing: dramatically complex transcript repertoires revealed with a dedicated mapping tool.

Authors:  Evgeny S Gerasimov; Anna A Gasparyan; Iosif Kaurov; Boris Tichý; Maria D Logacheva; Alexander A Kolesnikov; Julius Lukeš; Vyacheslav Yurchenko; Sara L Zimmer; Pavel Flegontov
Journal:  Nucleic Acids Res       Date:  2018-01-25       Impact factor: 16.971

4.  Molecular mechanisms of thermal resistance of the insect trypanosomatid Crithidia thermophila.

Authors:  Aygul Ishemgulova; Anzhelika Butenko; Lucie Kortišová; Carolina Boucinha; Anastasiia Grybchuk-Ieremenko; Karina A Morelli; Martina Tesařová; Natalya Kraeva; Danyil Grybchuk; Tomáš Pánek; Pavel Flegontov; Julius Lukeš; Jan Votýpka; Márcio Galvão Pavan; Fred R Opperdoes; Viktoria Spodareva; Claudia M d'Avila-Levy; Alexei Yu Kostygov; Vyacheslav Yurchenko
Journal:  PLoS One       Date:  2017-03-22       Impact factor: 3.240

5.  Diversity and evolution of anuran trypanosomes: insights from the study of European species.

Authors:  Viktoria V Spodareva; Anastasiia Grybchuk-Ieremenko; Alexander Losev; Jan Votýpka; Julius Lukeš; Vyacheslav Yurchenko; Alexei Yu Kostygov
Journal:  Parasit Vectors       Date:  2018-08-02       Impact factor: 3.876

6.  Development of Phytomonas lipae sp. n. (Kinetoplastea: Trypanosomatidae) in the true bug Coreus marginatus (Heteroptera: Coreidae) and insights into the evolution of life cycles in the genus Phytomonas.

Authors:  Alexander O Frolov; Marina N Malysheva; Anna I Ganyukova; Viktoria V Spodareva; Vyacheslav Yurchenko; Alexei Y Kostygov
Journal:  PLoS One       Date:  2019-04-03       Impact factor: 3.240

7.  The First Non-LRV RNA Virus in Leishmania.

Authors:  Danyil Grybchuk; Diego H Macedo; Yulia Kleschenko; Natalya Kraeva; Alexander N Lukashev; Paul A Bates; Pavel Kulich; Tereza Leštinová; Petr Volf; Alexei Y Kostygov; Vyacheslav Yurchenko
Journal:  Viruses       Date:  2020-02-02       Impact factor: 5.048

8.  Common Structural Patterns in the Maxicircle Divergent Region of Trypanosomatidae.

Authors:  Evgeny S Gerasimov; Ksenia A Zamyatnina; Nadezda S Matveeva; Yulia A Rudenskaya; Natalya Kraeva; Alexander A Kolesnikov; Vyacheslav Yurchenko
Journal:  Pathogens       Date:  2020-02-05

9.  If host is refractory, insistent parasite goes berserk: Trypanosomatid Blastocrithidia raabei in the dock bug Coreus marginatus.

Authors:  Alexander O Frolov; Marina N Malysheva; Anna I Ganyukova; Viktoria V Spodareva; Jana Králová; Vyacheslav Yurchenko; Alexei Y Kostygov
Journal:  PLoS One       Date:  2020-01-16       Impact factor: 3.240

  9 in total

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