Literature DB >> 22012709

Identification of a catalytic base for sugar oxidation in the pyranose 2-oxidase reaction.

Thanyaporn Wongnate1, Jeerus Sucharitakul, Pimchai Chaiyen.   

Abstract

Pyranose 2-oxidase (P2O) catalyzes the oxidation of aldopyranoses to form 2-keto sugars and H(2)O(2) . In this study, the mechanistic role of the conserved residues His548 and Asn593 in P2O was investigated by using site-directed mutagenesis, transient kinetics, and pH-dependence studies. As single mutants of H548 resulted in mixed populations of noncovalently bound and covalently linked FAD, double mutants containing H167A were constructed, in which the covalent histidyl-FAD linkage was removed in addition to having the H548 mutation. Single mutants H548A, H548N, H548S, H548D and double mutants (with H167A) could not be reduced by D-glucose. For the H167A/H548R mutant, the flavin could be reduced by D-glucose with the reduction rate constant about 220 times lower than that of the H167A mutant. The pH-dependence studies of H167A/H548R indicated that the rate constant of flavin reduction increased about 360-fold upon a pH rise corresponding to pK(a) >10.1, whereas the reactions of the wild-type and H167A mutant enzymes were pH independent. Therefore, the data suggest that a pK(a) value of >10.1 in the mutant enzyme is associated with the Arg548 residue, and that this residue must be unprotonated to efficiently catalyze flavin reduction. The data imply that for the wild-type P2O, the conserved His548 should be unprotonated in the pH range studied. The unprotonated His548 can act as a general base to abstract the 2-hydroxyl proton of D-glucose and initiate hydride transfer from the substrate to the flavin. Studies of the single mutant N593H showed that the flavin reduction rate constant was 114 times lower than that of the wild-type enzyme and was pH independent, while the K(d) for D-glucose binding was 19 times greater.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 22012709     DOI: 10.1002/cbic.201100564

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  7 in total

1.  Oxidation mode of pyranose 2-oxidase is controlled by pH.

Authors:  Methinee Prongjit; Jeerus Sucharitakul; Bruce A Palfey; Pimchai Chaiyen
Journal:  Biochemistry       Date:  2013-02-12       Impact factor: 3.162

2.  Engineering pyranose 2-oxidase for modified oxygen reactivity.

Authors:  Dagmar Brugger; Iris Krondorfer; Christopher Shelswell; Benjamin Huber-Dittes; Dietmar Haltrich; Clemens K Peterbauer
Journal:  PLoS One       Date:  2014-10-08       Impact factor: 3.240

3.  Redox Cofactor Rotates during Its Stepwise Decarboxylation: Molecular Mechanism of Conversion of Coproheme to Heme b.

Authors:  Lisa Milazzo; Thomas Gabler; Dominic Pühringer; Zuzana Jandova; Daniel Maresch; Hanna Michlits; Vera Pfanzagl; Kristina Djinović-Carugo; Chris Oostenbrink; Paul G Furtmüller; Christian Obinger; Giulietta Smulevich; Stefan Hofbauer
Journal:  ACS Catal       Date:  2019-06-18       Impact factor: 13.700

4.  Molecular dynamics simulations give insight into D-glucose dioxidation at C2 and C3 by Agaricus meleagris pyranose dehydrogenase.

Authors:  Michael M H Graf; Urban Bren; Dietmar Haltrich; Chris Oostenbrink
Journal:  J Comput Aided Mol Des       Date:  2013-04-17       Impact factor: 3.686

5.  Crystallographic fragment screening-based study of a novel FAD-dependent oxidoreductase from Chaetomium thermophilum.

Authors:  Leona Švecová; Lars Henrik Østergaard; Tereza Skálová; Kirk Matthew Schnorr; Tomáš Koval'; Petr Kolenko; Jan Stránský; David Sedlák; Jarmila Dušková; Mária Trundová; Jindřich Hašek; Jan Dohnálek
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-05-14       Impact factor: 7.652

6.  The 1.6 Å crystal structure of pyranose dehydrogenase from Agaricus meleagris rationalizes substrate specificity and reveals a flavin intermediate.

Authors:  Tien Chye Tan; Oliver Spadiut; Thanyaporn Wongnate; Jeerus Sucharitakul; Iris Krondorfer; Christoph Sygmund; Dietmar Haltrich; Pimchai Chaiyen; Clemens K Peterbauer; Christina Divne
Journal:  PLoS One       Date:  2013-01-09       Impact factor: 3.240

7.  Reaction of pyranose dehydrogenase from Agaricus meleagris with its carbohydrate substrates.

Authors:  Michael M H Graf; Jeerus Sucharitakul; Urban Bren; Dinh Binh Chu; Gunda Koellensperger; Stephan Hann; Paul G Furtmüller; Christian Obinger; Clemens K Peterbauer; Chris Oostenbrink; Pimchai Chaiyen; Dietmar Haltrich
Journal:  FEBS J       Date:  2015-09-11       Impact factor: 5.542

  7 in total

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