Literature DB >> 22011719

Physiological homogeneity among the endosymbionts of Riftia pachyptila and Tevnia jerichonana revealed by proteogenomics.

Antje Gardebrecht1, Stephanie Markert, Stefan M Sievert, Horst Felbeck, Andrea Thürmer, Dirk Albrecht, Antje Wollherr, Johannes Kabisch, Nadine Le Bris, Rüdiger Lehmann, Rolf Daniel, Heiko Liesegang, Michael Hecker, Thomas Schweder.   

Abstract

The two closely related deep-sea tubeworms Riftia pachyptila and Tevnia jerichonana both rely exclusively on a single species of sulfide-oxidizing endosymbiotic bacteria for their nutrition. They do, however, thrive in markedly different geochemical conditions. A detailed proteogenomic comparison of the endosymbionts coupled with an in situ characterization of the geochemical environment was performed to investigate their roles and expression profiles in the two respective hosts. The metagenomes indicated that the endosymbionts are genotypically highly homogeneous. Gene sequences coding for enzymes of selected key metabolic functions were found to be 99.9% identical. On the proteomic level, the symbionts showed very consistent metabolic profiles, despite distinctly different geochemical conditions at the plume level of the respective hosts. Only a few minor variations were observed in the expression of symbiont enzymes involved in sulfur metabolism, carbon fixation and in the response to oxidative stress. Although these changes correspond to the prevailing environmental situation experienced by each host, our data strongly suggest that the two tubeworm species are able to effectively attenuate differences in habitat conditions, and thus to provide their symbionts with similar micro-environments.

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Year:  2011        PMID: 22011719      PMCID: PMC3309349          DOI: 10.1038/ismej.2011.137

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  39 in total

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Authors:  David Rickard; George W Luther
Journal:  Chem Rev       Date:  2007-01-30       Impact factor: 60.622

2.  Periplasmic nitrate reductase (NapABC enzyme) supports anaerobic respiration by Escherichia coli K-12.

Authors:  Valley Stewart; Yiran Lu; Andrew J Darwin
Journal:  J Bacteriol       Date:  2002-03       Impact factor: 3.490

3.  Fate of nitrate acquired by the tubeworm Riftia pachyptila.

Authors:  P R Girguis; R W Lee; N Desaulniers; J J Childress; M Pospesel; H Felbeck; F Zal
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

4.  Molecular phylogenetics of bacterial endosymbionts and their vestimentiferan hosts.

Authors:  R A Feldman; M B Black; C S Cary; R A Lutz; R C Vrijenhoek
Journal:  Mol Mar Biol Biotechnol       Date:  1997-09

5.  Sulfide Binding by the Blood of the Hydrothermal Vent Tube Worm Riftia pachyptila.

Authors:  A J Arp; J J Childress
Journal:  Science       Date:  1983-01-21       Impact factor: 47.728

6.  Siboglinid-bacteria endosymbiosis: A model system for studying symbiotic mechanisms.

Authors:  Daniel J Thornhill; Kevin T Fielman; Scott R Santos; Kenneth M Halanych
Journal:  Commun Integr Biol       Date:  2008

7.  Control of thioredoxin reductase gene (trxB) transcription by SarA in Staphylococcus aureus.

Authors:  Anand Ballal; Adhar C Manna
Journal:  J Bacteriol       Date:  2010-01       Impact factor: 3.490

8.  Chemoautotrophic Potential of the Hydrothermal Vent Tube Worm, Riftia pachyptila Jones (Vestimentifera).

Authors:  H Felbeck
Journal:  Science       Date:  1981-07-17       Impact factor: 47.728

9.  Flagellum-mediated adhesion by Burkholderia pseudomallei precedes invasion of Acanthamoeba astronyxis.

Authors:  Timothy J J Inglis; Terry Robertson; Donald E Woods; Nichole Dutton; Barbara J Chang
Journal:  Infect Immun       Date:  2003-04       Impact factor: 3.441

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

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  37 in total

1.  Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels.

Authors:  Lizbeth Sayavedra; Manuel Kleiner; Ruby Ponnudurai; Silke Wetzel; Eric Pelletier; Valerie Barbe; Nori Satoh; Eiichi Shoguchi; Dennis Fink; Corinna Breusing; Thorsten Bh Reusch; Philip Rosenstiel; Markus B Schilhabel; Dörte Becher; Thomas Schweder; Stephanie Markert; Nicole Dubilier; Jillian M Petersen
Journal:  Elife       Date:  2015-09-15       Impact factor: 8.140

2.  Endosymbionts escape dead hydrothermal vent tubeworms to enrich the free-living population.

Authors:  Julia Klose; Martin F Polz; Michael Wagner; Mario P Schimak; Sabine Gollner; Monika Bright
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

3.  Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont.

Authors:  Satoshi Nakagawa; Shigeru Shimamura; Yoshihiro Takaki; Yohey Suzuki; Shun-ichi Murakami; Tamaki Watanabe; So Fujiyoshi; Sayaka Mino; Tomoo Sawabe; Takahiro Maeda; Hiroko Makita; Suguru Nemoto; Shin-Ichiro Nishimura; Hiromi Watanabe; Tomo-o Watsuji; Ken Takai
Journal:  ISME J       Date:  2013-08-08       Impact factor: 10.302

4.  GAPP: A Proteogenomic Software for Genome Annotation and Global Profiling of Post-translational Modifications in Prokaryotes.

Authors:  Jia Zhang; Ming-Kun Yang; Honghui Zeng; Feng Ge
Journal:  Mol Cell Proteomics       Date:  2016-09-14       Impact factor: 5.911

5.  Crystal structures of a pentameric ion channel gated by alkaline pH show a widely open pore and identify a cavity for modulation.

Authors:  Haidai Hu; Ákos Nemecz; Catherine Van Renterghem; Zaineb Fourati; Ludovic Sauguet; Pierre-Jean Corringer; Marc Delarue
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-09       Impact factor: 11.205

6.  Insights into Symbiont Population Structure among Three Vestimentiferan Tubeworm Host Species at Eastern Pacific Spreading Centers.

Authors:  Maëva Perez; S Kim Juniper
Journal:  Appl Environ Microbiol       Date:  2016-08-15       Impact factor: 4.792

7.  Hydrogen Does Not Appear To Be a Major Electron Donor for Symbiosis with the Deep-Sea Hydrothermal Vent Tubeworm Riftia pachyptila.

Authors:  Jessica H Mitchell; Juliana M Leonard; Jennifer Delaney; Peter R Girguis; Kathleen M Scott
Journal:  Appl Environ Microbiol       Date:  2019-12-13       Impact factor: 4.792

Review 8.  The microbiomes of deep-sea hydrothermal vents: distributed globally, shaped locally.

Authors:  Gregory J Dick
Journal:  Nat Rev Microbiol       Date:  2019-05       Impact factor: 60.633

9.  Bacterial symbiont subpopulations have different roles in a deep-sea symbiosis.

Authors:  Tjorven Hinzke; Manuel Kleiner; Mareike Meister; Rabea Schlüter; Christian Hentschker; Jan Pané-Farré; Petra Hildebrandt; Horst Felbeck; Stefan M Sievert; Florian Bonn; Uwe Völker; Dörte Becher; Thomas Schweder; Stephanie Markert
Journal:  Elife       Date:  2021-01-06       Impact factor: 8.140

10.  At the Gate of Mutualism: Identification of Genomic Traits Predisposing to Insect-Bacterial Symbiosis in Pathogenic Strains of the Aphid Symbiont Serratia symbiotica.

Authors:  François Renoz; Vincent Foray; Jérôme Ambroise; Patrice Baa-Puyoulet; Bertrand Bearzatto; Gipsi Lima Mendez; Alina S Grigorescu; Jacques Mahillon; Patrick Mardulyn; Jean-Luc Gala; Federica Calevro; Thierry Hance
Journal:  Front Cell Infect Microbiol       Date:  2021-06-29       Impact factor: 5.293

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