Literature DB >> 22011469

Common arc method for diffraction pattern orientation.

Gábor Bortel1, Miklós Tegze.   

Abstract

Very short pulses of X-ray free-electron lasers opened the way to obtaining diffraction signal from single particles beyond the radiation dose limit. For three-dimensional structure reconstruction many patterns are recorded in the object's unknown orientation. A method is described for the orientation of continuous diffraction patterns of non-periodic objects, utilizing intensity correlations in the curved intersections of the corresponding Ewald spheres, and hence named the common arc orientation method. The present implementation of the algorithm optionally takes into account Friedel's law, handles missing data and is capable of determining the point group of symmetric objects. Its performance is demonstrated on simulated diffraction data sets and verification of the results indicates a high orientation accuracy even at low signal levels. The common arc method fills a gap in the wide palette of orientation methods.
© 2011 International Union of Crystallography

Year:  2011        PMID: 22011469     DOI: 10.1107/S0108767311036269

Source DB:  PubMed          Journal:  Acta Crystallogr A        ISSN: 0108-7673            Impact factor:   2.290


  7 in total

1.  Reconstruction from limited single-particle diffraction data via simultaneous determination of state, orientation, intensity, and phase.

Authors:  Jeffrey J Donatelli; James A Sethian; Peter H Zwart
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-26       Impact factor: 11.205

2.  The correlation of single-particle diffraction patterns as a continuous function of particle orientation.

Authors:  Andrew V Martin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-07-17       Impact factor: 6.237

3.  A comprehensive simulation framework for imaging single particles and biomolecules at the European X-ray Free-Electron Laser.

Authors:  Chun Hong Yoon; Mikhail V Yurkov; Evgeny A Schneidmiller; Liubov Samoylova; Alexey Buzmakov; Zoltan Jurek; Beata Ziaja; Robin Santra; N Duane Loh; Thomas Tschentscher; Adrian P Mancuso
Journal:  Sci Rep       Date:  2016-04-25       Impact factor: 4.379

4.  Merging single-shot XFEL diffraction data from inorganic nanoparticles: a new approach to size and orientation determination.

Authors:  Xuanxuan Li; John C H Spence; Brenda G Hogue; Haiguang Liu
Journal:  IUCrJ       Date:  2017-09-22       Impact factor: 4.769

5.  An encryption-decryption framework to validating single-particle imaging.

Authors:  Zhou Shen; Colin Zhi Wei Teo; Kartik Ayyer; N Duane Loh
Journal:  Sci Rep       Date:  2021-01-13       Impact factor: 4.379

6.  Facilitating model reconstruction for single-particle scattering using small-angle X-ray scattering methods.

Authors:  Shufen Ma; Haiguang Liu
Journal:  J Appl Crystallogr       Date:  2016-03-18       Impact factor: 3.304

7.  Start-to-end simulation of single-particle imaging using ultra-short pulses at the European X-ray Free-Electron Laser.

Authors:  Carsten Fortmann-Grote; Alexey Buzmakov; Zoltan Jurek; Ne-Te Duane Loh; Liubov Samoylova; Robin Santra; Evgeny A Schneidmiller; Thomas Tschentscher; Sergey Yakubov; Chun Hong Yoon; Michael V Yurkov; Beata Ziaja-Motyka; Adrian P Mancuso
Journal:  IUCrJ       Date:  2017-09-01       Impact factor: 4.769

  7 in total

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