Literature DB >> 22004889

Reconfiguring gene traps for new tasks using iTRAC.

Zacharias Kontarakis1, Nikolaos Konstantinides, Anastasios Pavlopoulos, Michalis Averof.   

Abstract

We recently developed integrase-mediated trap conversion (iTRAC) as a means of exploiting gene traps to create new genetic tools, such as markers for imaging, drivers for gene expression and landing sites for gene and chromosome engineering. The principle of iTRAC is simple: primary gene traps are generated with transposon vectors carrying φC31 integrase docking sites, which are subsequently utilized to integrate different constructs into the selected trapped loci. Thus, iTRAC allows us to reconfigure selected traps for new purposes. Two features make iTRAC an attractive approach for Drosophila research. First, its versatility permits the exploitation of gene traps in an open-ended way, for applications that were not envisaged during the primary trapping screen. Second, iTRAC is readily transferable to new species and provides a means for developing complex genetic tools in drosophilids that lack the facility of Drosophila melanogaster genetics.

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Year:  2011        PMID: 22004889      PMCID: PMC3266077          DOI: 10.4161/fly.5.4.18108

Source DB:  PubMed          Journal:  Fly (Austin)        ISSN: 1933-6934            Impact factor:   2.160


  45 in total

1.  A universal marker for transgenic insects.

Authors:  A J Berghammer; M Klingler; E A Wimmer
Journal:  Nature       Date:  1999-11-25       Impact factor: 49.962

Review 2.  Ten years of enhancer detection: lessons from the fly.

Authors:  H J Bellen
Journal:  Plant Cell       Date:  1999-12       Impact factor: 11.277

3.  Neural architecture of the primary gustatory center of Drosophila melanogaster visualized with GAL4 and LexA enhancer-trap systems.

Authors:  Takaaki Miyazaki; Kei Ito
Journal:  J Comp Neurol       Date:  2010-10-15       Impact factor: 3.215

4.  Comparative analysis of binary expression systems for directed gene expression in transgenic insects.

Authors:  Ivana Viktorinová; Ernst A Wimmer
Journal:  Insect Biochem Mol Biol       Date:  2006-12-05       Impact factor: 4.714

5.  The Drosophila gene disruption project: progress using transposons with distinctive site specificities.

Authors:  Hugo J Bellen; Robert W Levis; Yuchun He; Joseph W Carlson; Martha Evans-Holm; Eunkyung Bae; Jaeseob Kim; Athanasios Metaxakis; Charalambos Savakis; Karen L Schulze; Roger A Hoskins; Allan C Spradling
Journal:  Genetics       Date:  2011-04-21       Impact factor: 4.562

6.  A versatile strategy for gene trapping and trap conversion in emerging model organisms.

Authors:  Zacharias Kontarakis; Anastasios Pavlopoulos; Alexandros Kiupakis; Nikolaos Konstantinides; Vassilis Douris; Michalis Averof
Journal:  Development       Date:  2011-06       Impact factor: 6.868

7.  MiMIC: a highly versatile transposon insertion resource for engineering Drosophila melanogaster genes.

Authors:  Koen J T Venken; Karen L Schulze; Nele A Haelterman; Hongling Pan; Yuchun He; Martha Evans-Holm; Joseph W Carlson; Robert W Levis; Allan C Spradling; Roger A Hoskins; Hugo J Bellen
Journal:  Nat Methods       Date:  2011-09       Impact factor: 28.547

8.  Optogenetics.

Authors:  Karl Deisseroth
Journal:  Nat Methods       Date:  2010-12-20       Impact factor: 28.547

9.  A versatile in vivo system for directed dissection of gene expression patterns.

Authors:  Daryl M Gohl; Marion A Silies; Xiaojing J Gao; Sheetal Bhalerao; Francisco J Luongo; Chun-Chieh Lin; Christopher J Potter; Thomas R Clandinin
Journal:  Nat Methods       Date:  2011-03       Impact factor: 28.547

Review 10.  The DNA transposon Minos as a tool for transgenesis and functional genomic analysis in vertebrates and invertebrates.

Authors:  Anastasios Pavlopoulos; Stefan Oehler; Maria G Kapetanaki; Charalambos Savakis
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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  1 in total

Review 1.  Protein trap: a new Swiss army knife for geneticists?

Authors:  Svetlana A Fedorova; Natalya V Dorogova
Journal:  Mol Biol Rep       Date:  2019-11-14       Impact factor: 2.316

  1 in total

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