Literature DB >> 22004735

Steady states and dynamics of urokinase-mediated plasmin activation in silico and in vitro.

Lakshmi Venkatraman1, Huipeng Li, C Forbes Dewey, Jacob K White, Sourav S Bhowmick, Hanry Yu, Lisa Tucker-Kellogg.   

Abstract

Plasmin (PLS) and urokinase-type plasminogen activator (UPA) are ubiquitous proteases that regulate the extracellular environment. Although they are secreted in inactive forms, they can activate each other through proteolytic cleavage. This mutual interplay creates the potential for complex dynamics, which we investigated using mathematical modeling and in vitro experiments. We constructed ordinary differential equations to model the conversion of precursor plasminogen into active PLS, and precursor urokinase (scUPA) into active urokinase (tcUPA). Although neither PLS nor UPA exhibits allosteric cooperativity, modeling showed that cooperativity occurred at the system level because of substrate competition. Computational simulations and bifurcation analysis predicted that the system would be bistable over a range of parameters for cooperativity and positive feedback. Cell-free experiments with recombinant proteins tested key predictions of the model. PLS activation in response to scUPA stimulus was found to be cooperative in vitro. Finally, bistability was demonstrated in vitro by the presence of two significantly different steady-state levels of PLS activation for the same levels of stimulus. We conclude that ultrasensitive, bistable activation of UPA-PLS is possible in the presence of substrate competition. An ultrasensitive threshold for activation of PLS and UPA would have ramifications for normal and disease processes, including angiogenesis, metastasis, wound healing, and fibrosis.
Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22004735      PMCID: PMC3192967          DOI: 10.1016/j.bpj.2011.08.054

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  50 in total

1.  The mechanism of plasminogen activation and fibrin dissolution by single chain urokinase-type plasminogen activator in a plasma milieu in vitro.

Authors:  H R Lijnen; B Van Hoef; F De Cock; D Collen
Journal:  Blood       Date:  1989-05-15       Impact factor: 22.113

2.  The concentration of tissue plasminogen activator and urokinase in plasma and tissues of patients with ovarian and uterine tumors.

Authors:  K Saito; M Nagashima; M Iwata; H Hamada; K Sumiyoshi; Y Takada; A Takada
Journal:  Thromb Res       Date:  1990-05-15       Impact factor: 3.944

3.  The effects of fibrinogen and its cleavage products on the kinetics of plasminogen activation by urokinase and subsequent plasmin activity.

Authors:  M A Lucas; D L Straight; L J Fretto; P A McKee
Journal:  J Biol Chem       Date:  1983-10-25       Impact factor: 5.157

Review 4.  The history of the angiogenic switch concept.

Authors:  D Ribatti; B Nico; E Crivellato; A M Roccaro; A Vacca
Journal:  Leukemia       Date:  2006-09-21       Impact factor: 11.528

5.  Bistability in apoptosis: roles of bax, bcl-2, and mitochondrial permeability transition pores.

Authors:  E Z Bagci; Y Vodovotz; T R Billiar; G B Ermentrout; I Bahar
Journal:  Biophys J       Date:  2005-12-09       Impact factor: 4.033

6.  Bistability in the JNK cascade.

Authors:  C P Bagowski; J E Ferrell
Journal:  Curr Biol       Date:  2001-08-07       Impact factor: 10.834

7.  Activation of plasminogen by single-chain urokinase or by two-chain urokinase--a demonstration that single-chain urokinase has a low catalytic activity (pro-urokinase).

Authors:  R Pannell; V Gurewich
Journal:  Blood       Date:  1987-01       Impact factor: 22.113

8.  Plasmin-mediated proteolysis is required for hepatocyte growth factor activation during liver repair.

Authors:  Kumar Shanmukhappa; Ursula Matte; Jay L Degen; Jorge A Bezerra
Journal:  J Biol Chem       Date:  2009-03-13       Impact factor: 5.157

9.  Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades.

Authors:  Nick I Markevich; Jan B Hoek; Boris N Kholodenko
Journal:  J Cell Biol       Date:  2004-01-26       Impact factor: 10.539

10.  Mathematical modeling identifies inhibitors of apoptosis as mediators of positive feedback and bistability.

Authors:  Stefan Legewie; Nils Blüthgen; Hanspeter Herzel
Journal:  PLoS Comput Biol       Date:  2006-07-28       Impact factor: 4.475

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  4 in total

1.  Plasmin triggers a switch-like decrease in thrombospondin-dependent activation of TGF-β1.

Authors:  Lakshmi Venkatraman; Ser-Mien Chia; Balakrishnan Chakrapani Narmada; Jacob K White; Sourav S Bhowmick; C Forbes Dewey; Peter T So; Lisa Tucker-Kellogg; Hanry Yu
Journal:  Biophys J       Date:  2012-09-05       Impact factor: 4.033

2.  A local uPAR-plasmin-TGFβ1 positive feedback loop in a qualitative computational model of angiogenic sprouting explains the in vitro effect of fibrinogen variants.

Authors:  Sonja E M Boas; Joao Carvalho; Marloes van den Broek; Ester M Weijers; Marie-José Goumans; Pieter Koolwijk; Roeland M H Merks
Journal:  PLoS Comput Biol       Date:  2018-07-06       Impact factor: 4.475

3.  A computational model of mutual antagonism in the mechano-signaling network of RhoA and nitric oxide.

Authors:  Akila Surendran; C Forbes Dewey; Boon Chuan Low; Lisa Tucker-Kellogg
Journal:  BMC Mol Cell Biol       Date:  2021-10-12

4.  Non-canonical Activation of Akt in Serum-Stimulated Fibroblasts, Revealed by Comparative Modeling of Pathway Dynamics.

Authors:  Tri Hieu Nim; Le Luo; Jacob K White; Marie-Véronique Clément; Lisa Tucker-Kellogg
Journal:  PLoS Comput Biol       Date:  2015-11-10       Impact factor: 4.475

  4 in total

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